TomoSeq data search

Data search

Results for MligTC455_42271

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_42271

1246

25.97

Mlig455_008840, Mlig455_008941

Neo: -

Age: -

Region-enriched R5: 1.156/0.02438

PGPEP1

Mlig455_008840 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.7]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=102, Expect=2e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=2e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=87.4, Expect=2e-21]} {RNA1509_47016} {RNA1310_22856} {RNA815_10452}

Mlig455_008941 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.9]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=4e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=100, Expect=5e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=81.6, Expect=3e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=86.3, Expect=4e-21]} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1310_22856, RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085, RNA815_10452}

Cumulative graph for MligTC455_42271

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.936	4.973	0.39875	1.00000
RegionR2	-0.829	4.973	0.12945	0.44658
RegionR3	0.45	4.973	0.28825	0.83123
RegionR4	0.769	4.973	0.13372	0.37112
RegionR5	1.156	4.973	0.00313	0.02438
RegionR6	0.255	4.973	0.56175	1.00000
RegionR7	-0.934	4.973	0.09477	0.58890
RegionR8	0.069	4.973	0.90813	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.037	4.973	0.10191	0.81947
RegenerationR2	0.094	4.973	0.85559	1.00000
RegenerationR3	-0.541	4.973	0.29835	0.72971
RegenerationR4	0.052	4.973	0.92302	1.00000
RegenerationR5	0.001	4.973	0.99852	1.00000
RegenerationR6	0.006	4.973	0.99135	1.00000
RegenerationBL	0.383	4.973	0.46378	0.83031
RegenerationTP	0.055	4.973	0.92672	1.00000

Genes with expression patterns similar to MligTC455_42271

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42271	1246	25.97	Mlig455_008840, Mlig455_008941	Neo: - Age: - Region-enriched R5: 1.156/0.02438	PGPEP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_008840 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.7]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=102, Expect=2e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=2e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=87.4, Expect=2e-21]} {RNA1509_47016} {RNA1310_22856} {RNA815_10452} Mlig455_008941 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.9]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=4e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=100, Expect=5e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=81.6, Expect=3e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=86.3, Expect=4e-21]} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1310_22856, RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085, RNA815_10452}
2.	MligTC455_39785	826	17.21	Mlig455_060611, Mlig455_066648	Neo: - Age: - Region-enriched R4: 1.206/0.01983	SHANK3	1.753	-	-	-	0.952	0.801	-	Mlig455_060611 {REF} {Length: 6123} {TRANSSPLICED} {tRNA: Arg(ACG), score=72.3} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.8]; Ankyrin repeats (3 copies) [PF12796.9, score=78.2]; Ankyrin repeats (many copies) [PF13857.8, score=58.9]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeat [PF13606.8, score=44.8]; PDZ domain [PF00595.26, score=41.6]; PDZ domain [PF17820.3, score=36.7]; N-terminal or F0 domain of Talin-head FERM [PF16511.7, score=23.8]; PDZ domain [PF13180.8, score=19.7]} {Human: ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]; ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=346, Expect=1e-103]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [RH, Score=342, Expect=3e-102]; ENSMUSG00000037541, Shank2, SH3 and multiple ankyrin repeat domains 2, [RH, Score=325, Expect=2e-96]; ENSMUSG00000038738, Shank1, SH3 and multiple ankyrin repeat domains 1, [RH, Score=325, Expect=2e-96]} {Dmel: FBgn0040752, Prosap, [RH, Score=380, Expect=8e-116]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=315, Expect=6e-96]} {Smed: dd_Smed_v6_4371_0_1, dd_Smed_v6_4371_0_1, [RH, Score=417, Expect=6e-135]} {RNA1509_11929, RNA1509_12279, RNA1509_5286} {RNA1310_5766, RNA1509_11929, RNA1509_12279} {RNA1509_11929, RNA1509_12279, RNA815_2909} Mlig455_066648 {REF} {Length: 1068} {Human: ENSG00000283243, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=91.3, Expect=3e-22]; ENSG00000251322, SHANK3, SH3 and multiple ankyrin repeat domains 3, [Score=90.9, Expect=3e-22]; ENSG00000161681, SHANK1, SH3 and multiple ankyrin repeat domains 1, [Score=87.0, Expect=8e-21]} {Mouse: ENSMUSG00000022623, Shank3, SH3 and multiple ankyrin repeat domains 3, [Score=93.2, Expect=4e-23]} {Dmel: FBgn0040752, Prosap, [Score=108, Expect=1e-28]} {Celegans: WBGene00006444, shn-1, SHaNk (SH3/ankyrin domain scaffold protein) related, [Score=90.5, Expect=2e-22]} {Smed: dd_Smed_v6_7862_0_1, dd_Smed_v6_7862_0_1, [Score=99.4, Expect=1e-25]} {RNA1509_5286} {RNA1310_5766} {RNA815_18299}
3.	MligTC455_13766	1529	31.85	Mlig455_010826	Neo: - Age: - Region-enriched R4: 1.778/0.00054 Region-enriched R5: 1.409/0.00046		0.951	-	-	-	-	-	0.951	Mlig455_010826 {REF} {Length: 2035} {Pfam: NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial [PF15880.7, score=46.6]} {RNA1509_22845} {RNA1310_11632} {RNA815_10000}
4.	MligTC455_17673	685	14.27	Mlig455_002365	Neo: - Age: - Region-enriched R4: 2.083/0.00001 Region-enriched R5: 1.707/0.00006	GLRA3	0.951	-	-	-	-	-	0.951	Mlig455_002365 {REF} {Length: 3426} {Pfam: Malate/L-lactate dehydrogenase [PF02615.16, score=348.8]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=148.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.2]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=257, Expect=1e-76]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=254, Expect=6e-76]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=1e-75]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=252, Expect=7e-75]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=9e-77]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=252, Expect=5e-75]} {Dmel: FBgn0037057, CG10512, [Score=334, Expect=2e-107]} {Celegans: WBGene00012149, VF13D12L.3, [Score=351, Expect=2e-113]} {Smed: dd_Smed_v6_3440_0_2, dd_Smed_v6_3440_0_2, [Score=351, Expect=8e-114]} {RNA1509_40602} {RNA1310_17891} {RNA815_5963.1}
5.	MligTC455_46218	295	6.16	Mlig455_024242	Neo: - Age: Down-Up-Down		0.951	-	-	-	0.951	-	-	Mlig455_024242 {REF} {Length: 2330} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=22.9]} {RNA1509_15530} {RNA1310_7440.1} {RNA815_19537}

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