TomoSeq data search

Data search

Results for MligTC455_17715

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17715

370

7.72

Mlig455_038155

Neo: -

Age: -

KAT6A

Mlig455_038155 {REF} {Length: 3514} {Pfam: PHD-finger [PF00628.31, score=63.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=22.3]} {Human: ENSG00000083168, KAT6A, lysine acetyltransferase 6A, [Score=113, Expect=5e-25]; ENSG00000281813, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]; ENSG00000156650, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000031540, Kat6a, K(lysine) acetyltransferase 6A, [Score=112, Expect=7e-25]; ENSMUSG00000021767, Kat6b, K(lysine) acetyltransferase 6B, [Score=107, Expect=2e-23]} {Dmel: FBgn0033015, d4, [Score=98.2, Expect=7e-22]} {Celegans: WBGene00016200, dpff-1, Zinc finger protein dpff-1, [Score=98.2, Expect=8e-22]} {Smed: dd_Smed_v6_11245_0_1, dd_Smed_v6_11245_0_1, [RH, Score=197, Expect=4e-53]} {RNA1509_17861} {RNA1310_4237.1} {RNA815_18146.1}

Cumulative graph for MligTC455_17715

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.565	3.351	0.18949	0.82239
RegionR2	0.795	3.351	0.40101	0.79538
RegionR3	0.271	3.351	0.72764	1.00000
RegionR4	0.561	3.351	0.55378	0.87408
RegionR5	0.192	3.351	0.76727	1.00000
RegionR6	0.806	3.351	0.35428	0.93896
RegionR7	0.413	3.351	0.67711	1.00000
RegionR8	2.527	3.351	0.00414	0.11248

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.956	3.351	0.99992	1.00000
RegenerationR2	0.161	3.351	0.72685	0.96455
RegenerationR3	0.308	3.351	0.58051	0.89892
RegenerationR4	0.191	3.351	0.72534	0.96327
RegenerationR5	0.978	3.351	0.05257	0.36906
RegenerationR6	0.62	3.351	0.23884	0.58626
RegenerationBL	0.767	3.351	0.17361	0.49935
RegenerationTP	-0.679	3.351	0.33845	0.78216

Genes with expression patterns similar to MligTC455_17715

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17715	370	7.72	Mlig455_038155	Neo: - Age: -	KAT6A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038155 {REF} {Length: 3514} {Pfam: PHD-finger [PF00628.31, score=63.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=22.3]} {Human: ENSG00000083168, KAT6A, lysine acetyltransferase 6A, [Score=113, Expect=5e-25]; ENSG00000281813, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]; ENSG00000156650, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000031540, Kat6a, K(lysine) acetyltransferase 6A, [Score=112, Expect=7e-25]; ENSMUSG00000021767, Kat6b, K(lysine) acetyltransferase 6B, [Score=107, Expect=2e-23]} {Dmel: FBgn0033015, d4, [Score=98.2, Expect=7e-22]} {Celegans: WBGene00016200, dpff-1, Zinc finger protein dpff-1, [Score=98.2, Expect=8e-22]} {Smed: dd_Smed_v6_11245_0_1, dd_Smed_v6_11245_0_1, [RH, Score=197, Expect=4e-53]} {RNA1509_17861} {RNA1310_4237.1} {RNA815_18146.1}
2.	MligTC455_22463	750	15.63	Mlig455_058964	Neo: - Age: -	CASP14	2.479	-	0.784	0.743	0.952	-	-	Mlig455_058964 {REF} {Length: 3729} {Pfam: Caspase domain [PF00656.24, score=41.2]} {Human: ENSG00000105141, CASP14, caspase 14, [Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_10883_0_1, dd_Smed_v6_10883_0_1, [Score=47.8, Expect=1e-05]} {RNA1509_53200} {RNA1310_10391.1, RNA1509_53200} {RNA1509_53200, RNA815_10541.1}
3.	MligTC455_27383	391	8.14	Mlig455_015315, Mlig455_016513, Mlig455_032996, Mlig455_047371, Mlig455_052716, Mlig455_062076	Neo: - Age: Down-Up-Down Region-enriched R7: 2.778/0.03706		1.774	-	-	0.814	0.960	-	-	Mlig455_015315 {REF} {Length: 780} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379} Mlig455_016513 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379} Mlig455_032996 {REF} {Length: 651} {RNA1509_47082} {RNA1310_18896.2} {RNA815_9379} Mlig455_047371 {REF} {Length: 2669} {TRANSSPLICED} {RNA1509_47082} {RNA1310_9596, RNA1509_47082} {RNA1509_47082, RNA815_8903} Mlig455_052716 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379} Mlig455_062076 {REF} {Length: 767} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}
4.	MligTC455_46007	1095	22.82	Mlig455_015551	Neo: - Age: - Regeneration-upregulated BL: 1.762 Regeneration-enriched BL: 1.762	RBMS3	1.746	-	-	0.956	0.790	-	-	Mlig455_015551 {REF} {Length: 2417} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=48.0]} {Human: ENSG00000144642, RBMS3, RNA binding motif single stranded interacting protein 3, [RH, Score=114, Expect=3e-27]; ENSG00000153250, RBMS1, RNA binding motif single stranded interacting protein 1, [RH, Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000026970, Rbms1, RNA binding motif, single stranded interacting protein 1, [RH, Score=115, Expect=8e-28]; ENSMUSG00000039607, Rbms3, RNA binding motif, single stranded interacting protein, [RH, Score=113, Expect=5e-27]} {Dmel: FBgn0052423, shep, alan shepard, [Score=100, Expect=4e-22]} {Celegans: WBGene00006331, sup-26, SUPpressor, [RH, Score=118, Expect=9e-29]} {Smed: dd_Smed_v6_2612_0_1, dd_Smed_v6_2612_0_1, [RH, Score=109, Expect=2e-25]} {RNA1509_18229} {RNA1310_2231} {RNA815_12809}
5.	MligTC455_40904	823	17.15	Mlig455_001137, Mlig455_001299	Neo: - Age: Up-Down-Down		0.972	-	-	-	0.972	-	-	Mlig455_001137 {REF} {Length: 3650} {Celegans: WBGene00008194, C49C3.4, [RH, Score=49.7, Expect=9e-06]} {RNA1509_50622} {RNA1310_2292} {RNA815_4180} Mlig455_001299 {REF} {Length: 3885} {Pfam: Mab-21 protein [PF03281.16, score=19.5]} {Celegans: WBGene00008194, C49C3.4, [RH, Score=50.1, Expect=9e-06]} {RNA1509_50622} {RNA1310_2292} {RNA815_4180}
6.	MligTC455_39026	511	10.64	Mlig455_042705	Neo: - Age: -	DVL3	0.964	-	-	-	0.964	-	-	Mlig455_042705 {REF} {Length: 4985} {Pfam: DIX domain [PF00778.19, score=105.4]; Dishevelled specific domain [PF02377.17, score=87.9]; PDZ domain [PF00595.26, score=62.1]; Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) [PF00610.23, score=58.7]; PDZ domain [PF17820.3, score=28.1]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.8]} {Human: ENSG00000161202, DVL3, dishevelled segment polarity protein 3, [RH, Score=448, Expect=4e-147]} {Mouse: ENSMUSG00000003233, Dvl3, dishevelled segment polarity protein 3, [RH, Score=447, Expect=7e-147]} {Dmel: FBgn0000499, dsh, dishevelled, [RH, Score=286, Expect=2e-86]} {Celegans: WBGene00001101, dsh-1, DiSHevelled related, [RH, Score=297, Expect=5e-90]} {Smed: dd_Smed_v6_8730_0_1, dd_Smed_v6_8730_0_1, [Score=551, Expect=0.0]} {RNA1509_41565, RNA1509_54403, RNA1509_56007} {RNA1310_10157, RNA1509_41565, RNA1509_54403, RNA1509_56007} {RNA1509_41565, RNA1509_54403, RNA1509_56007, RNA815_18953}
7.	MligTC455_25833	61	1.26	Mlig455_001681	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_001681 {REF} {Length: 651} {NoTransDecoderORF} {RNA1509_34813} {RNA1310_37479.1} {RNA815_40067.1}
8.	MligTC455_30260	338	7.04	Mlig455_030544	Neo: - Age: -	ADAM17	0.957	-	-	-	-	-	0.957	Mlig455_030544 {REF} {Length: 4293} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=87.6]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=73.2]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=34.6]; Membrane-proximal domain, switch, for ADAM17 [PF16698.7, score=32.9]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=28.7]; Reprolysin family propeptide [PF01562.21, score=23.6]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [RH, Score=342, Expect=4e-105]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [RH, Score=340, Expect=1e-104]} {Dmel: FBgn0039734, Tace, [RH, Score=291, Expect=1e-87]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [RH, Score=202, Expect=2e-55]} {Smed: dd_Smed_v6_2341_0_2, dd_Smed_v6_2341_0_2, [Score=124, Expect=3e-29]} {RNA1509_15132} {RNA1310_5685, RNA1509_15132} {RNA1509_15132, RNA815_5678}
9.	MligTC455_48652	153	3.18	Mlig455_005843	Neo: Irradiation Age: logFC(26M/2M)=0.247	GUCD1	0.957	-	-	-	-	-	0.957	Mlig455_005843 {REF} {Length: 4560} {TRANSSPLICED} {Pfam: Guanylylate cyclase [PF09778.11, score=114.3]; Peptidase C39 family [PF03412.17, score=21.0]; Peptidase_C39 like family [PF13529.8, score=20.6]} {Human: ENSG00000138867, GUCD1, guanylyl cyclase domain containing 1, [Score=69.7, Expect=4e-12]} {Mouse: ENSMUSG00000033416, Gucd1, guanylyl cyclase domain containing 1, [RH, Score=67.0, Expect=8e-12]} {Dmel: FBgn0040375, CG13760, [Score=89.7, Expect=2e-19]} {RNA1509_32403, RNA1509_54650} {RNA1310_5978, RNA1509_32403, RNA1509_54650} {RNA1509_32403, RNA1509_54650, RNA815_11367}
10.	MligTC455_18322	82	1.71	Mlig455_021228	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.636		0.956	-	0.956	-	-	-	-	Mlig455_021228 {REF} {Length: 3954} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=26.3]} {Smed: dd_Smed_v6_11972_0_1, dd_Smed_v6_11972_0_1, [RH, Score=229, Expect=2e-64]} {RNA1509_9124} {RNA1310_5268.1, RNA1509_9124} {RNA1509_9124, RNA815_1717.1}
11.	MligTC455_18323	168	3.5	Mlig455_021183, Mlig455_057885	Neo: - Age: logFC(26M/2M)=-0.384 Region-enriched R2: 3.394/0.02680		0.955	-	0.955	-	-	-	-	Mlig455_021183 {REF} {Length: 3969} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=24.3]} {Smed: dd_Smed_v6_11972_0_1, dd_Smed_v6_11972_0_1, [RH, Score=221, Expect=7e-62]} {RNA1509_9124} {RNA1310_5268.1} {RNA815_1717.1} Mlig455_057885 {REF} {Length: 4416} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=24.3]} {Smed: dd_Smed_v6_11972_0_1, dd_Smed_v6_11972_0_1, [RH, Score=221, Expect=1e-61]} {RNA1509_9124} {RNA1310_5268.1} {RNA815_1717.1}
12.	MligTC455_39245	25	0.52	Mlig455_064874	Neo: - Age: -	EBF3	0.954	-	-	-	0.954	-	-	Mlig455_064874 {REF} {Length: 2576} {Pfam: Transcription factor COE1 DNA-binding domain [PF16422.7, score=406.0]; Transcription factor COE1 helix-loop-helix domain [PF16423.7, score=101.1]; IPT/TIG domain [PF01833.26, score=45.5]} {Human: ENSG00000108001, EBF3, early B cell factor 3, [RH, Score=632, Expect=0.0]; ENSG00000164330, EBF1, early B cell factor 1, [RH, Score=628, Expect=0.0]; ENSG00000088881, EBF4, early B cell factor 4, [RH, Score=615, Expect=0.0]; ENSG00000221818, EBF2, early B cell factor 2, [RH, Score=612, Expect=0.0]} {Mouse: ENSMUSG00000010476, Ebf3, early B cell factor 3, [RH, Score=634, Expect=0.0]; ENSMUSG00000057098, Ebf1, early B cell factor 1, [RH, Score=633, Expect=0.0]; ENSMUSG00000053552, Ebf4, early B cell factor 4, [RH, Score=614, Expect=0.0]; ENSMUSG00000022053, Ebf2, early B cell factor 2, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0001319, kn, knot, [RH, Score=613, Expect=0.0]} {Celegans: WBGene00006743, unc-3, Transcription factor unc-3, [RH, Score=508, Expect=1e-175]} {Smed: dd_Smed_v6_9893_0_1, dd_Smed_v6_9893_0_1, [RH, Score=602, Expect=0.0]} {RNA1310_25883.2} {RNA815_32670}
13.	MligTC455_25374	428	8.91	Mlig455_036389, Mlig455_036390, Mlig455_036391, Mlig455_054557	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.690 Regeneration-upregulated BL: 5.459 Regeneration-enriched BL: 5.459		0.951	-	-	-	-	0.951	-	Mlig455_036389 {REF} {Length: 860} {NoTransDecoderORF} {RNA1509_40044} {RNA1310_33232} {RNA815_16463} Mlig455_036390 {REF} {Length: 5024} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1} Mlig455_036391 {REF} {Length: 3445} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1} Mlig455_054557 {REF} {Length: 6330} {RNA1509_54862} {RNA1310_31416} {RNA815_5170.1}

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