M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_27383

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_27383 391 8.14 Mlig455_015315, Mlig455_016513, Mlig455_032996, Mlig455_047371, Mlig455_052716, Mlig455_062076

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.778/0.03706

Mlig455_015315 {REF} {Length: 780} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_016513 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_032996 {REF} {Length: 651} {RNA1509_47082} {RNA1310_18896.2} {RNA815_9379}

Mlig455_047371 {REF} {Length: 2669} {TRANSSPLICED} {RNA1509_47082} {RNA1310_9596, RNA1509_47082} {RNA1509_47082, RNA815_8903}

Mlig455_052716 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_062076 {REF} {Length: 767} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Cumulative graph for MligTC455_27383

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.041 3.412 0.15368 0.77072
RegionR2 0.654 3.412 0.55721 0.92058
RegionR3 -0.441 3.412 0.94854 1.00000
RegionR4 2.714 3.412 0.01080 0.06466
RegionR5 -1.36 3.412 0.99488 1.00000
RegionR6 0.425 3.412 0.66271 1.00000
RegionR7 2.778 3.412 0.00109 0.03706
RegionR8 1.273 3.412 0.26834 0.89179

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.513 3.412 1.00000 1.00000
RegenerationR2 -0.059 3.412 0.94204 1.00000
RegenerationR3 -0.073 3.412 0.94288 1.00000
RegenerationR4 -1.175 3.412 0.20064 0.64680
RegenerationR5 2.122 3.412 0.02726 0.28014
RegenerationR6 1.072 3.412 0.23073 0.57721
RegenerationBL -0.64 3.412 0.47133 0.83772
RegenerationTP -2.139 3.412 0.03001 0.29129


Genes with expression patterns similar to MligTC455_27383

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_27383 391 8.14 Mlig455_015315, Mlig455_016513, Mlig455_032996, Mlig455_047371, Mlig455_052716, Mlig455_062076

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.778/0.03706

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_015315 {REF} {Length: 780} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_016513 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_032996 {REF} {Length: 651} {RNA1509_47082} {RNA1310_18896.2} {RNA815_9379}

Mlig455_047371 {REF} {Length: 2669} {TRANSSPLICED} {RNA1509_47082} {RNA1310_9596, RNA1509_47082} {RNA1509_47082, RNA815_8903}

Mlig455_052716 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_062076 {REF} {Length: 767} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}
2. MligTC455_17715 370 7.72 Mlig455_038155

Neo: -

Age: -

 KAT6A 1.774 - - 0.814 0.960 - - Mlig455_038155 {REF} {Length: 3514} {Pfam: PHD-finger [PF00628.31, score=63.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=22.3]} {Human: ENSG00000083168, KAT6A, lysine acetyltransferase 6A, [Score=113, Expect=5e-25]; ENSG00000281813, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]; ENSG00000156650, KAT6B, lysine acetyltransferase 6B, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000031540, Kat6a, K(lysine) acetyltransferase 6A, [Score=112, Expect=7e-25]; ENSMUSG00000021767, Kat6b, K(lysine) acetyltransferase 6B, [Score=107, Expect=2e-23]} {Dmel: FBgn0033015, d4, [Score=98.2, Expect=7e-22]} {Celegans: WBGene00016200, dpff-1, Zinc finger protein dpff-1, [Score=98.2, Expect=8e-22]} {Smed: dd_Smed_v6_11245_0_1, dd_Smed_v6_11245_0_1, [RH, Score=197, Expect=4e-53]} {RNA1509_17861} {RNA1310_4237.1} {RNA815_18146.1}
3. MligTC455_22773 138 2.87 Mlig455_026562

Neo: -

Age: -

 1.721 0.756 - - - 0.965 - Mlig455_026562 {REF} {Length: 1348} {NoTransDecoderORF} {RNA1310_69367} {RNA815_45046}
4. MligTC455_35825 173 3.6 Mlig455_037159

Neo: -

Age: -

Region-enriched R8: 2.519/0.03499

 AJM1 1.704 0.735 - - - 0.969 - Mlig455_037159 {REF} {Length: 7148} {Pfam: MYND finger [PF01753.20, score=19.8]} {Human: ENSG00000232434, AJM1, apical junction component 1 homolog, [Score=74.7, Expect=1e-12]} {Mouse: ENSMUSG00000029419, Ajm1, apical junction component 1, [Score=79.3, Expect=4e-14]} {Dmel: FBgn0261802, CG42748, [Score=63.2, Expect=2e-09]} {RNA1509_7980} {RNA1310_3656, RNA1509_7980} {RNA1509_7980, RNA815_1390}
5. MligTC455_21823 231 4.8 Mlig455_039344

Neo: -

Age: Down-Up-Down

 1.688 0.707 - - - 0.981 - Mlig455_039344 {REF} {Length: 5107} {RNA1509_29876, RNA1509_44890} {RNA1310_5676, RNA1509_44890} {RNA1509_44890, RNA815_2024}
6. MligTC455_29583 172 3.58 Mlig455_014689

Neo: -

Age: -

Region-enriched R2: 4.050/0.00075

 1.675 - - 0.714 - 0.961 - Mlig455_014689 {REF} {Length: 2132} {Smed: dd_Smed_v6_9995_0_1, dd_Smed_v6_9995_0_1, [RH, Score=91.7, Expect=8e-21]} {RNA1509_17870} {RNA1310_11287} {RNA815_5700}
7. MligTC455_29152 33 0.68 Mlig455_018706

Neo: -

Age: -

 1.67 - - 0.716 - 0.954 - Mlig455_018706 {REF} {Length: 1786} {RNA1509_38365} {RNA1310_54025} {RNA815_28950}
8. MligTC455_52762 237 4.94 Mlig455_020578

Neo: Irradiation

Age: -

 DLC1 0.976 - - - - 0.976 - Mlig455_020578 {REF} {Length: 5812} {Pfam: RhoGAP domain [PF00620.29, score=111.3]; START domain [PF01852.21, score=52.9]} {Human: ENSG00000164741, DLC1, DLC1 Rho GTPase activating protein, [RH, Score=379, Expect=6e-114]; ENSG00000285265, DLC1, DLC1 Rho GTPase activating protein, [RH, Score=379, Expect=5e-111]} {Mouse: ENSMUSG00000031523, Dlc1, deleted in liver cancer 1, [RH, Score=374, Expect=2e-109]} {Dmel: FBgn0285955, cv-c, crossveinless c, [RH, Score=345, Expect=1e-98]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [RH, Score=232, Expect=4e-62]} {Smed: dd_Smed_v6_9530_0_1, dd_Smed_v6_9530_0_1, [RH, Score=345, Expect=3e-103]} {RNA1509_36273} {RNA1310_9000} {RNA815_6507}
9. MligTC455_43356 239 4.98 Mlig455_005859, Mlig455_028758

Neo: Int S/G2/M

Age: Down-Up-Down

 0.974 - - - - 0.974 -

Mlig455_005859 {REF} {Length: 2071} {Pfam: F5/8 type C domain [PF00754.27, score=19.9]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=47.4, Expect=7e-07]} {RNA1509_36923} {RNA1310_31801.1} {RNA815_14193.1}

Mlig455_028758 {REF} {Length: 1755} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=49.7, Expect=8e-08]} {RNA1509_36923} {RNA1310_31801.1} {RNA815_14193.1}
10. MligTC455_38917 43 0.9 Mlig455_065534

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_065534 {REF} {Length: 1123} {RNA1509_15277} {RNA1310_22069} {RNA815_17936.2}
11. MligTC455_32685 505 10.53 Mlig455_057075

Neo: -

Age: Up-Down-Up

 0.965 - - - - 0.965 - Mlig455_057075 {REF} {Length: 7466} {Pfam: REJ domain [PF02010.17, score=62.8]} {RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150} {RNA1310_402.1, RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150} {RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150, RNA815_93.1}
12. MligTC455_35272 452 9.42 Mlig455_038403, Mlig455_038463, Mlig455_038607

Neo: Int S/G2/M

Age: -

 PIK3CD 0.965 - - - - 0.965 -

Mlig455_038403 {REF} {Length: 5830} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=151.1]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=101.8]; Phosphoinositide 3-kinase C2 [PF00792.26, score=49.9]; PI3-kinase family, p85-binding domain [PF02192.18, score=30.7]} {Human: ENSG00000171608, PIK3CD, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=368, Expect=6e-109]; ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=357, Expect=5e-105]; ENSG00000051382, PIK3CB, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=354, Expect=6e-104]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=361, Expect=8e-108]; ENSMUSG00000039936, Pik3cd, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=361, Expect=8e-107]; ENSMUSG00000032462, Pik3cb, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=357, Expect=2e-105]} {Dmel: FBgn0015279, Pi3K92E, [Score=353, Expect=9e-104]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [Score=277, Expect=7e-77]} {Smed: dd_Smed_v6_3599_0_1, dd_Smed_v6_3599_0_1, [RH, Score=315, Expect=3e-90]} {RNA1509_14087} {RNA1310_3470.1} {RNA815_1746}

Mlig455_038463 {REF} {Length: 5457} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=151.2]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=101.8]; Phosphoinositide 3-kinase C2 [PF00792.26, score=49.9]; PI3-kinase family, p85-binding domain [PF02192.18, score=30.6]} {Human: ENSG00000171608, PIK3CD, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=366, Expect=2e-108]; ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=360, Expect=4e-106]; ENSG00000051382, PIK3CB, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=353, Expect=8e-104]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=364, Expect=6e-109]; ENSMUSG00000039936, Pik3cd, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=361, Expect=5e-107]; ENSMUSG00000032462, Pik3cb, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=356, Expect=5e-105]} {Dmel: FBgn0015279, Pi3K92E, [Score=353, Expect=8e-104]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [Score=276, Expect=1e-76]} {Smed: dd_Smed_v6_3599_0_1, dd_Smed_v6_3599_0_1, [RH, Score=313, Expect=6e-90]} {RNA1509_14087} {RNA1310_3470.1} {RNA815_1746}

Mlig455_038607 {REF} {Length: 5905} {TRANSSPLICED} {Pfam: Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=151.1]; Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=101.3]; Phosphoinositide 3-kinase C2 [PF00792.26, score=49.7]; PI3-kinase family, p85-binding domain [PF02192.18, score=30.5]} {Human: ENSG00000171608, PIK3CD, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=366, Expect=3e-108]; ENSG00000121879, PIK3CA, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=360, Expect=4e-106]; ENSG00000051382, PIK3CB, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=351, Expect=5e-103]} {Mouse: ENSMUSG00000027665, Pik3ca, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha, [Score=364, Expect=8e-109]; ENSMUSG00000039936, Pik3cd, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta, [Score=362, Expect=3e-107]; ENSMUSG00000032462, Pik3cb, phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta, [Score=353, Expect=1e-103]} {Dmel: FBgn0015279, Pi3K92E, [Score=352, Expect=2e-103]} {Celegans: WBGene00000090, age-1, Phosphatidylinositol 3-kinase age-1, [Score=276, Expect=1e-76]} {Smed: dd_Smed_v6_3599_0_1, dd_Smed_v6_3599_0_1, [RH, Score=314, Expect=5e-90]} {RNA1509_14087} {RNA1310_3470.1, RNA1509_14087} {RNA1509_14087, RNA815_1746}
13. MligTC455_32291 533 11.1 Mlig455_035366

Neo: -

Age: Up-Down-Down

 ZNFX1 0.964 - - - - 0.964 - Mlig455_035366 {REF} {Length: 7311} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=118.7]; Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=111.1]; AAA domain [PF13086.8, score=81.4]; AAA domain [PF13245.8, score=33.0]; AAA domain [PF13604.8, score=29.6]; PhoH-like protein [PF02562.18, score=18.2]} {Human: ENSG00000124201, ZNFX1, zinc finger NFX1-type containing 1, [Score=378, Expect=9e-106]} {Mouse: ENSMUSG00000039501, Znfx1, zinc finger, NFX1-type containing 1, [Score=373, Expect=2e-104]} {Dmel: FBgn0039165, CG6204, [Score=162, Expect=3e-40]} {Celegans: WBGene00014208, ZK1067.2, [Score=220, Expect=2e-57]} {Smed: dd_Smed_v6_10696_0_1, dd_Smed_v6_10696_0_1, [Score=362, Expect=1e-101]} {RNA1509_3888, RNA1509_48765} {RNA1310_460.1, RNA1509_48765} {RNA1509_48765, RNA815_987}
14. MligTC455_49078 190 3.96 Mlig455_047213

Neo: -

Age: Down-Up-Down

 EIF5A 0.963 - - - - 0.963 - Mlig455_047213 {REF} {Length: 1506} {Pfam: Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold [PF01287.22, score=19.5]} {Human: ENSG00000132507, EIF5A, eukaryotic translation initiation factor 5A, [Score=100, Expect=8e-27]; ENSG00000253626, EIF5AL1, eukaryotic translation initiation factor 5A-like 1, [Score=99.0, Expect=4e-26]} {Mouse: ENSMUSG00000078812, Eif5a, eukaryotic translation initiation factor 5A, [Score=100, Expect=6e-27]} {Dmel: FBgn0285952, eEF5, eukaryotic translation elongation factor 5, [Score=89.0, Expect=1e-22]} {Celegans: WBGene00002065, iff-2, Eukaryotic translation initiation factor 5A-2, [Score=88.2, Expect=2e-22]} {Smed: dd_Smed_v6_966_0_1, dd_Smed_v6_966_0_1, [Score=79.0, Expect=5e-19]} {RNA1310_34057.1} {RNA815_20082}
15. MligTC455_53773 707 14.74 Mlig455_002240

Neo: -

Age: logFC(26M/2M)=-0.336

 ERICH3 0.963 - - - - 0.963 - Mlig455_002240 {REF} {Length: 6404} {Pfam: PLAT/LH2 domain [PF01477.25, score=233.3]; Domain of unknown function (DUF4590) [PF15257.8, score=138.1]; Embryo-specific protein 3, (ATS3) [PF06232.13, score=44.3]} {Human: ENSG00000178965, ERICH3, glutamate rich 3, [RH, Score=135, Expect=3e-31]} {Mouse: ENSMUSG00000078161, Erich3, glutamate rich 3, [RH, Score=127, Expect=1e-28]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_8627_0_1, dd_Smed_v6_8627_0_1, [Score=130, Expect=4e-30]} {RNA1509_1640} {RNA1310_3685} {RNA815_304.1}
16. MligTC455_19012 73 1.52 Mlig455_023546, Mlig455_023674

Neo: -

Age: -

 CASP3, INVS 0.962 - - - - 0.962 -

Mlig455_023546 {REF} {Length: 3342} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=84.3]; Ankyrin repeats (many copies) [PF13637.8, score=57.6]; Ankyrin repeats (many copies) [PF13857.8, score=56.9]; Ankyrin repeat [PF00023.32, score=56.6]; Ankyrin repeat [PF13606.8, score=50.1]; Caspase domain [PF00656.24, score=45.2]} {Human: ENSG00000119509, INVS, inversin, [Score=67.8, Expect=3e-11]} {Mouse: ENSMUSG00000028344, Invs, inversin, [Score=63.5, Expect=4e-10]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00000821, csp-3, Non-catalytic caspase homolog csp-3, [RH, Score=56.2, Expect=2e-09]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_53346} {RNA1310_9699} {RNA815_6436}

Mlig455_023674 {REF} {Length: 6646} {Pfam: Caspase domain [PF00656.24, score=109.6]; Ankyrin repeats (3 copies) [PF12796.9, score=83.0]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (many copies) [PF13857.8, score=55.1]; Ankyrin repeat [PF00023.32, score=54.3]; Ankyrin repeat [PF13606.8, score=48.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=107, Expect=2e-25]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=101, Expect=3e-23]; ENSMUSG00000025076, Casp7, caspase 7, [Score=96.7, Expect=1e-21]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=89.0, Expect=7e-19]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=85.1, Expect=4e-18]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=97.1, Expect=2e-22]} {RNA1509_53346} {RNA1310_9699} {RNA815_6436}
17. MligTC455_19115 184 3.83 Mlig455_044234

Neo: -

Age: logFC(26M/2M)=-0.512

Region-enriched R4: 3.012/0.02283

 0.962 - - - - 0.962 - Mlig455_044234 {REF} {Length: 1695} {RNA1509_40702} {RNA1310_18749, RNA1509_40702} {RNA1509_40702, RNA815_7953}
18. MligTC455_16149 59 1.22 Mlig455_059983

Neo: -

Age: logFC(26M/2M)=1.934

 KLHDC8A 0.961 - - - - 0.961 - Mlig455_059983 {REF} {Length: 1797} {Pfam: Kelch motif [PF13964.8, score=56.9]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=37.5]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=2e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=4e-63]} {RNA1509_58319} {RNA1310_20213} {RNA815_8052}
19. MligTC455_13584 45 0.94 Mlig455_048123

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_048123 {REF} {Length: 651} {NoTransDecoderORF} {RNA1310_64743}
20. MligTC455_18258 406 8.45 Mlig455_028823

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_028823 {REF} {Length: 5290} {TRANSSPLICED} {Pfam: Neuralized [PF07177.14, score=84.3]; C-terminal of Roc, COR, domain [PF16095.7, score=81.1]; TIR domain [PF13676.8, score=69.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=39.7]; Death domain [PF00531.24, score=32.7]} {Mouse: ENSMUSG00000047180, Neurl3, neuralized E3 ubiquitin protein ligase 3, [RH, Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_6002_0_1, dd_Smed_v6_6002_0_1, [RH, Score=318, Expect=8e-90]} {RNA1509_12960, RNA1509_39690} {RNA1310_3368.1, RNA1509_12960, RNA1509_39690} {RNA1509_12960, RNA1509_39690, RNA815_1587}
21. MligTC455_47962 1186 24.7 Mlig455_013564, Mlig455_013618

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.250

Region-enriched R4: 1.616/0.00549

 0.957 - - - - 0.957 -

Mlig455_013564 {REF} {Length: 2951} {TRANSSPLICED} {RNA1509_26875, RNA1509_46492} {RNA1310_9354.2, RNA1509_26875, RNA1509_46492} {RNA1509_26875, RNA1509_46492, RNA815_12277.1}

Mlig455_013618 {REF} {Length: 3260} {TRANSSPLICED} {RNA1509_21658, RNA1509_26875} {RNA1310_9354.2, RNA1509_21658} {RNA1509_21658, RNA815_12277.2}
22. MligTC455_15680 74 1.55 Mlig455_036786

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_036786 {REF} {Length: 598} {NoTransDecoderORF} {RNA1310_71532} {RNA815_40310}
23. MligTC455_47146 157 3.28 Mlig455_053968

Neo: -

Age: logFC(26M/2M)=-0.429

Region-enriched R4: 3.868/0.00961

 TTC24 0.956 - - - - 0.956 - Mlig455_053968 {REF} {Length: 4078} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=57.5]; Tetratricopeptide repeat [PF00515.30, score=50.0]; Tetratricopeptide repeat [PF13176.8, score=49.3]; Tetratricopeptide repeat [PF13181.8, score=31.7]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=67.8, Expect=1e-11]} {RNA1509_7768} {RNA1310_13043} {RNA815_789.1}
24. MligTC455_20735 524 10.92 Mlig455_001230, Mlig455_034590

Neo: -

Age: Up-Down-Down

 DNAH17 0.955 - - - - 0.955 -

Mlig455_001230 {REF} {Length: 15133} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=453.0]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.3]; P-loop containing dynein motor region D4 [PF12780.9, score=304.2]; ATP-binding dynein motor region [PF12781.9, score=281.8]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.0]; AAA+ lid domain [PF17857.3, score=124.8]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.2]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.3]; AAA domain [PF13401.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.1]; AAA domain [PF13238.8, score=24.4]; AAA ATPase domain [PF13191.8, score=22.9]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5109, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5036, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5137, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5062, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4904, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1042, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5484, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1, RNA1509_1474} {RNA1509_1474, RNA815_35}

Mlig455_034590 {REF} {Length: 15079} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=492.0]; Microtubule-binding stalk of dynein motor [PF12777.9, score=454.2]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=451.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=392.2]; Dynein heavy chain C-terminal domain [PF18199.3, score=310.2]; P-loop containing dynein motor region D4 [PF12780.9, score=304.8]; ATP-binding dynein motor region [PF12781.9, score=281.1]; P-loop containing dynein motor region [PF12775.9, score=247.8]; Dynein heavy chain AAA lid domain [PF18198.3, score=173.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=137.1]; AAA+ lid domain [PF17857.3, score=124.7]; AAA domain (dynein-related subfamily) [PF07728.16, score=88.5]; Dynein heavy chain AAA lid domain [PF17852.3, score=86.4]; AAA domain [PF13401.8, score=32.8]; Sigma-54 interaction domain [PF00158.28, score=29.0]; AAA domain [PF13604.8, score=26.2]; AAA domain [PF13238.8, score=25.8]; AAA ATPase domain [PF13191.8, score=22.7]; Spectrin repeat [PF00435.23, score=19.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.0]} {Human: ENSG00000187775, DNAH17, dynein axonemal heavy chain 17, [Score=5106, Expect=0.0]; ENSG00000007174, DNAH9, dynein axonemal heavy chain 9, [Score=5032, Expect=0.0]} {Mouse: ENSMUSG00000033987, Dnah17, dynein, axonemal, heavy chain 17, [Score=5136, Expect=0.0]; ENSMUSG00000056752, Dnah9, dynein, axonemal, heavy chain 9, [Score=5061, Expect=0.0]} {Dmel: FBgn0013812, Dhc93AB, Dynein heavy chain at 93AB, [Score=4905, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1040, Expect=0.0]} {Smed: dd_Smed_v6_3670_0_1, dd_Smed_v6_3670_0_1, [Score=5483, Expect=0.0]} {RNA1509_1474} {RNA1310_44.1} {RNA815_35}
25. MligTC455_27606 737 15.35 Mlig455_021387

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.410

Region-enriched R2: 2.253/0.00085

 DNAH2 0.954 - - - - 0.954 - Mlig455_021387 {REF} {Length: 14312} {TRANSSPLICED} {Pfam: Dynein heavy chain, N-terminal region 1 [PF08385.14, score=496.3]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=494.1]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=430.7]; P-loop containing dynein motor region D4 [PF12780.9, score=351.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=339.4]; ATP-binding dynein motor region [PF12781.9, score=291.7]; P-loop containing dynein motor region [PF12775.9, score=252.9]; Microtubule-binding stalk of dynein motor [PF12777.9, score=192.7]; Dynein heavy chain AAA lid domain [PF18198.3, score=179.6]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=162.6]; Dynein heavy chain AAA lid domain [PF17852.3, score=97.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=96.3]; AAA+ lid domain [PF17857.3, score=76.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=42.2]; AAA domain [PF13401.8, score=29.8]; AAA domain [PF13238.8, score=26.3]} {Human: ENSG00000183914, DNAH2, dynein axonemal heavy chain 2, [RH, Score=5278, Expect=0.0]} {Mouse: ENSMUSG00000005237, Dnah2, dynein, axonemal, heavy chain 2, [RH, Score=5325, Expect=0.0]} {Dmel: FBgn0001313, kl-2, male fertility factor kl2, [RH, Score=4028, Expect=0.0]} {Celegans: WBGene00000485, che-3, Cytoplasmic dynein 2 heavy chain 1, [Score=1132, Expect=0.0]} {Smed: dd_Smed_v6_6941_0_2, dd_Smed_v6_6941_0_2, [RH, Score=5163, Expect=0.0]} {RNA1509_24980, RNA1509_251} {RNA1310_43.1, RNA1509_24980, RNA1509_251} {RNA1509_24980, RNA1509_251, RNA815_22.1}
26. MligTC455_31203 40 0.83 Mlig455_022986, Mlig455_027758

Neo: Int S/G2/M

Age: -

 0.953 - - - - 0.953 -

Mlig455_022986 {REF} {Length: 5142} {RNA1509_23857} {RNA1310_7741.2} {RNA815_2064.1}

Mlig455_027758 {REF} {Length: 3703} {RNA1509_23857} {RNA1310_7741.2} {RNA815_2064.1}
27. MligTC455_48011 321 6.68 Mlig455_053119

Neo: -

Age: logFC(26M/2M)=-0.341

 0.953 - - - - 0.953 - Mlig455_053119 {REF} {Length: 938} {Smed: dd_Smed_v6_2217_0_1, dd_Smed_v6_2217_0_1, [RH, Score=54.7, Expect=4e-10]} {RNA1509_30673} {RNA1310_38150, RNA1509_30673} {RNA1509_30673, RNA815_20383}
28. MligTC455_52893 350 7.29 Mlig455_055901

Neo: -

Age: -

 ANK3 0.953 - - - - 0.953 - Mlig455_055901 {REF} {Length: 2748} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=83.0]; Ankyrin repeats (many copies) [PF13857.8, score=78.9]; Ankyrin repeats (many copies) [PF13637.8, score=77.7]; Ankyrin repeat [PF13606.8, score=54.6]; Ankyrin repeat [PF00023.32, score=51.9]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=59.7, Expect=2e-08]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=57.0, Expect=7e-08]; ENSMUSG00000033701, Acbd6, acyl-Coenzyme A binding domain containing 6, [Score=54.3, Expect=1e-07]} {Dmel: FBgn0040372, G9a, [Score=64.3, Expect=3e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=50.1, Expect=5e-06]} {Smed: dd_Smed_v6_9418_0_1, dd_Smed_v6_9418_0_1, [RH, Score=165, Expect=4e-44]} {RNA1509_13574, RNA1509_25185} {RNA1310_7698, RNA1509_13574, RNA1509_25185} {RNA1509_13574, RNA1509_25185, RNA815_7052}
29. MligTC455_14340 69 1.44 Mlig455_043719, Mlig455_043806

Neo: -

Age: -

 PLAT 0.952 - - - - 0.952 -

Mlig455_043719 {REF} {Length: 4752} {Pfam: Kringle domain [PF00051.20, score=51.5]} {Human: ENSG00000104368, PLAT, plasminogen activator, tissue type, [Score=57.0, Expect=9e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=51.6, Expect=3e-06]; ENSMUSG00000059481, Plg, plasminogen, [Score=51.2, Expect=6e-06]; ENSMUSG00000031538, Plat, plasminogen activator, tissue, [Score=50.4, Expect=7e-06]} {Dmel: FBgn0010407, Ror, [Score=51.6, Expect=3e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=50.1, Expect=8e-06]} {RNA1509_21873} {RNA1310_6714.1} {RNA815_2006.1}

Mlig455_043806 {REF} {Length: 5127} {Pfam: Kringle domain [PF00051.20, score=51.5]} {Human: ENSG00000104368, PLAT, plasminogen activator, tissue type, [Score=57.0, Expect=9e-08]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=51.6, Expect=3e-06]; ENSMUSG00000059481, Plg, plasminogen, [Score=51.2, Expect=6e-06]; ENSMUSG00000031538, Plat, plasminogen activator, tissue, [Score=50.4, Expect=7e-06]} {Dmel: FBgn0010407, Ror, [Score=51.6, Expect=3e-06]} {Celegans: WBGene00000289, cam-1, Tyrosine-protein kinase receptor cam-1, [Score=50.1, Expect=8e-06]} {RNA1509_21873} {RNA1310_6714.1} {RNA815_2006.1}
30. MligTC455_47843 349 7.27 Mlig455_040270, Mlig455_040278

Neo: -

Age: -

 RPGRIP1L 0.951 - - - - 0.951 -

Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}

Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}
31. MligTC455_06391 1026 21.37 Mlig455_062730

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.011/0.01080

 0.95 - - - - 0.950 - Mlig455_062730 {REF} {Length: 2469} {Pfam: R3H-associated N-terminal domain [PF13902.8, score=34.1]} {RNA1509_18629} {RNA1310_30621, RNA1509_18629} {RNA1509_18629, RNA815_27499}
32. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

 RTL1 0.95 - - - - 0.950 - Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
33. MligTC455_32678 100 2.08 Mlig455_057070

Neo: -

Age: Up-Down-Down

Regeneration-downregulated BL: -10.317

Regeneration-depleted BL: -10.317

 0.95 - - - - 0.950 - Mlig455_057070 {REF} {Length: 24662} {Pfam: REJ domain [PF02010.17, score=62.7]} {RNA1509_21224} {RNA1310_402.1} {RNA815_93.1}
34. MligTC455_33400 665 13.86 Mlig455_057260

Neo: -

Age: -

Region-enriched R3: 1.844/0.01904

 TRPM7 0.95 - - - - 0.950 - Mlig455_057260 {REF} {Length: 6369} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.9]; Ankyrin repeats (many copies) [PF13637.8, score=62.9]; Ankyrin repeat [PF13606.8, score=32.3]; Ankyrin repeats (many copies) [PF13857.8, score=27.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.7]; Ankyrin repeat [PF00023.32, score=21.3]} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=92.8, Expect=6e-18]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=91.3, Expect=1e-17]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=77.8, Expect=1e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=77.0, Expect=1e-13]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=112, Expect=1e-24]} {RNA1509_7385} {RNA1310_1150} {RNA815_344}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA