TomoSeq data search

Data search

Results for MligTC455_17844

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17844

6149

128.11

Mlig455_024338, Mlig455_024457

Neo: -

Age: -

ARL1

Mlig455_024338 {REF} {Length: 1215} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_59399} {RNA1310_27992, RNA1509_59399} {RNA1509_59399, RNA815_12253}

Mlig455_024457 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_5255} {RNA1310_27992, RNA1509_11836, RNA1509_5255} {RNA1509_11836, RNA1509_5255, RNA815_12253}

Cumulative graph for MligTC455_17844

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.402	7.084	0.00862	0.27464
RegionR2	-0.231	7.084	0.51051	0.88825
RegionR3	-0.143	7.084	0.63341	1.00000
RegionR4	0.587	7.084	0.07528	0.25416
RegionR5	0.507	7.084	0.07071	0.23999
RegionR6	0.535	7.084	0.06234	0.46782
RegionR7	0.437	7.084	0.13842	0.69691
RegionR8	-0.29	7.084	0.39840	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.381	7.084	0.59626	1.00000
RegenerationR2	-0.101	7.084	0.78480	0.98484
RegenerationR3	-0.313	7.084	0.41940	0.81444
RegenerationR4	-0.705	7.084	0.06988	0.42016
RegenerationR5	-0.432	7.084	0.25061	0.68453
RegenerationR6	-0.49	7.084	0.19148	0.52991
RegenerationBL	0.163	7.084	0.62385	0.96661
RegenerationTP	0.202	7.084	0.57092	0.94496

Genes with expression patterns similar to MligTC455_17844

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17844	6149	128.11	Mlig455_024338, Mlig455_024457	Neo: - Age: -	ARL1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_024338 {REF} {Length: 1215} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_59399} {RNA1310_27992, RNA1509_59399} {RNA1509_59399, RNA815_12253} Mlig455_024457 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_5255} {RNA1310_27992, RNA1509_11836, RNA1509_5255} {RNA1509_11836, RNA1509_5255, RNA815_12253}
2.	MligTC455_19090	545	11.36	Mlig455_002101	Neo: - Age: Down-Down-Up		1.78	-	-	-	0.963	0.817	-	Mlig455_002101 {REF} {Length: 2098} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=43.2]; Tight junction protein, Claudin-like [PF06653.13, score=21.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.4]; Protein of unknown function (DUF2723) [PF11028.10, score=20.4]} {Dmel: FBgn0013720, pck, pickel, [Score=102, Expect=7e-26]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [Score=160, Expect=3e-48]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192}
3.	MligTC455_38553	176	3.66	Mlig455_038193	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.503	DCHS1	0.964	-	-	-	0.964	-	-	Mlig455_038193 {REF} {Length: 9281} {Pfam: Cadherin domain [PF00028.19, score=631.3]; Cadherin-like [PF08266.14, score=33.8]; Cadherin-like [PF16184.7, score=29.7]; RET Cadherin like domain 1 [PF17756.3, score=22.2]} {Human: ENSG00000166341, DCHS1, dachsous cadherin-related 1, [Score=471, Expect=1e-132]} {Mouse: ENSMUSG00000102692, Dchs2, dachsous cadherin related 2, [Score=472, Expect=4e-133]; ENSMUSG00000036862, Dchs1, dachsous cadherin related 1, [Score=451, Expect=1e-126]} {Dmel: FBgn0284247, ds, dachsous, [Score=495, Expect=2e-140]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=240, Expect=5e-63]} {Smed: dd_Smed_v6_11744_0_1, dd_Smed_v6_11744_0_1, [Score=200, Expect=9e-51]} {RNA1509_7140} {RNA1310_695} {RNA815_267}
4.	MligTC455_18991	10967	228.47	Mlig455_037440, Mlig455_037464, Mlig455_037503	Neo: - Age: logFC(26M/2M)=-0.211 Regeneration-upregulated BL: 1.902 Regeneration-enriched BL: 1.902	CHRNA6	0.96	-	-	-	0.960	-	-	Mlig455_037440 {REF} {Length: 2692} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=70.7]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=47.1]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=112, Expect=5e-27]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=108, Expect=4e-25]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=108, Expect=2e-25]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=112, Expect=1e-26]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=113, Expect=2e-27]} {RNA1509_24940, RNA1509_3092} {RNA1310_30196.2, RNA1509_24940} {RNA1509_24940, RNA815_25568} Mlig455_037464 {REF} {Length: 2686} {RNA1509_3092} {RNA1310_30196.2} {RNA815_6516} Mlig455_037503 {REF} {Length: 1172} {RNA1509_3092} {RNA1310_28554} {RNA815_6516}
5.	MligTC455_41411	20038	417.45	Mlig455_034270, Mlig455_034308	Neo: - Age: Up-Down-Up, logFC(26M/2M)=-1.434		0.957	-	-	-	0.957	-	-	Mlig455_034270 {REF} {Length: 1150} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_29224} {RNA1310_35556} {RNA815_17023} Mlig455_034308 {REF} {Length: 1449} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556} {RNA815_17023}
6.	MligTC455_41412	20050	417.71	Mlig455_067306, Mlig455_067322	Neo: - Age: Down-Up-Down		0.957	-	-	-	0.957	-	-	Mlig455_067306 {REF} {Length: 1224} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556} {RNA815_17023} Mlig455_067322 {REF} {Length: 1115} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556, RNA1509_57533} {RNA1509_57533, RNA815_17023}
7.	MligTC455_17358	192	4.01	Mlig455_015662	Neo: - Age: -		0.954	-	-	-	0.954	-	-	Mlig455_015662 {REF} {Length: 1607} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_21460, RNA1509_36891} {RNA1310_16370, RNA1509_36891} {RNA1509_36891, RNA815_12658}
8.	MligTC455_45598	1174	24.46	Mlig455_020219	Neo: - Age: Up-Down-Down Region-enriched R8: 4.023/0.00000		0.954	-	-	-	0.954	-	-	Mlig455_020219 {REF} {Length: 4562} {RNA1509_16423} {RNA1310_11001} {RNA815_16188}
9.	MligTC455_15712	181	3.76	Mlig455_030495	Neo: - Age: - Region-enriched R8: 3.854/0.00430	PAX6	0.951	-	-	-	0.951	-	-	Mlig455_030495 {REF} {Length: 4633} {Pfam: 'Paired box' domain [PF00292.20, score=231.0]; Homeodomain [PF00046.31, score=76.2]; Homeodomain-like domain [PF13384.8, score=21.2]} {Human: ENSG00000007372, PAX6, paired box 6, [RH, Score=259, Expect=5e-80]} {Mouse: ENSMUSG00000027168, Pax6, paired box 6, [RH, Score=258, Expect=2e-78]} {Dmel: FBgn0019650, toy, twin of eyeless, [RH, Score=243, Expect=6e-72]} {Celegans: WBGene00006870, vab-3, MAB-18, [RH, Score=236, Expect=2e-70]} {Smed: dd_Smed_v6_17726_0_1, dd_Smed_v6_17726_0_1, [RH, Score=431, Expect=9e-144]} {RNA1310_37223} {RNA815_52287.1}
10.	MligTC455_21641	362	7.53	Mlig455_052610	Neo: Irradiation Age: -	SLC6A5	0.95	-	-	-	0.950	-	-	Mlig455_052610 {REF} {Length: 3682} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=239.7]; BTB/POZ domain [PF00651.33, score=60.3]; BTB And C-terminal Kelch [PF07707.17, score=45.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=192, Expect=1e-50]; ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [Score=189, Expect=3e-50]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=191, Expect=1e-50]; ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [Score=183, Expect=7e-51]} {Dmel: FBgn0034911, CG5549, [Score=203, Expect=4e-54]} {Celegans: WBGene00004905, snf-6, Sodium-dependent acetylcholine transporter, [Score=173, Expect=4e-45]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=191, Expect=2e-51]} {RNA1509_27437} {RNA1310_11200.1} {RNA815_3821}

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