M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_19090

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19090 545 11.36 Mlig455_002101

Neo: -

Age: Down-Down-Up

 Mlig455_002101 {REF} {Length: 2098} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=43.2]; Tight junction protein, Claudin-like [PF06653.13, score=21.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.4]; Protein of unknown function (DUF2723) [PF11028.10, score=20.4]} {Dmel: FBgn0013720, pck, pickel, [Score=102, Expect=7e-26]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [Score=160, Expect=3e-48]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192}

Cumulative graph for MligTC455_19090

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.141 3.637 0.90076 1.00000
RegionR2 0.415 3.637 0.40617 0.80017
RegionR3 -0.645 3.637 0.15620 0.66831
RegionR4 -0.505 3.637 0.36167 0.68471
RegionR5 -0.472 3.637 0.26658 0.59003
RegionR6 -0.521 3.637 0.25973 0.84759
RegionR7 0.695 3.637 0.15428 0.72714
RegionR8 1.174 3.637 0.03469 0.36556

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.178 3.637 0.08782 0.79439
RegenerationR2 -1.148 3.637 0.01767 0.21835
RegenerationR3 -1.061 3.637 0.05853 0.41430
RegenerationR4 -1.101 3.637 0.05338 0.37111
RegenerationR5 -0.48 3.637 0.35622 0.76854
RegenerationR6 -0.341 3.637 0.54402 0.83507
RegenerationBL -0.32 3.637 0.55855 0.91382
RegenerationTP -0.602 3.637 0.28733 0.73329


Genes with expression patterns similar to MligTC455_19090

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19090 545 11.36 Mlig455_002101

Neo: -

Age: Down-Down-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_002101 {REF} {Length: 2098} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=43.2]; Tight junction protein, Claudin-like [PF06653.13, score=21.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.4]; Protein of unknown function (DUF2723) [PF11028.10, score=20.4]} {Dmel: FBgn0013720, pck, pickel, [Score=102, Expect=7e-26]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [Score=160, Expect=3e-48]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192}
2. MligTC455_19089 645 13.43 Mlig455_002210

Neo: -

Age: -

Region-enriched R7: 2.068/0.03789

 MEGF6 3.551 0.994 0.992 - 0.769 - 0.796 Mlig455_002210 {REF} {Length: 7790} {Pfam: Coagulation Factor Xa inhibitory site [PF14670.8, score=117.5]; Laminin EGF domain [PF00053.26, score=111.7]; Calcium-binding EGF domain [PF07645.17, score=84.0]; Complement Clr-like EGF-like [PF12662.9, score=74.8]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=41.3]; Human growth factor-like EGF [PF12661.9, score=21.3]; Tight junction protein, Claudin-like [PF06653.13, score=20.1]; EGF domain [PF12947.9, score=19.0]} {Human: ENSG00000162591, MEGF6, multiple EGF like domains 6, [RH, Score=974, Expect=0.0]} {Mouse: ENSMUSG00000057751, Megf6, multiple EGF-like-domains 6, [RH, Score=1023, Expect=0.0]} {Dmel: FBgn0027594, drpr, draper, [RH, Score=446, Expect=1e-133]} {Celegans: WBGene00013416, Y64G10A.7, [RH, Score=1100, Expect=0.0]} {Smed: dd_Smed_v6_5630_0_1, dd_Smed_v6_5630_0_1, [Score=758, Expect=0.0]} {RNA1509_42688} {RNA1310_2807} {RNA815_1132}
3. MligTC455_19088 635 13.23 Mlig455_002010

Neo: -

Age: -

 3.514 0.995 0.992 - 0.744 - 0.783 Mlig455_002010 {REF} {Length: 1783} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=50.9]; Tight junction protein, Claudin-like [PF06653.13, score=29.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=24.1]; Protein of unknown function (DUF2723) [PF11028.10, score=20.5]} {Dmel: FBgn0013720, pck, pickel, [RH, Score=111, Expect=5e-29]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [RH, Score=172, Expect=1e-52]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192}
4. MligTC455_18991 10967 228.47 Mlig455_037440, Mlig455_037464, Mlig455_037503

Neo: -

Age: logFC(26M/2M)=-0.211

Regeneration-upregulated BL: 1.902

Regeneration-enriched BL: 1.902

 CHRNA6 1.805 - - 0.848 0.957 - -

Mlig455_037440 {REF} {Length: 2692} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=70.7]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=47.1]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=117, Expect=2e-28]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=112, Expect=5e-27]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=108, Expect=4e-25]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=108, Expect=2e-25]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=112, Expect=1e-26]} {Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=110, Expect=3e-26]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=113, Expect=2e-27]} {RNA1509_24940, RNA1509_3092} {RNA1310_30196.2, RNA1509_24940} {RNA1509_24940, RNA815_25568}

Mlig455_037464 {REF} {Length: 2686} {RNA1509_3092} {RNA1310_30196.2} {RNA815_6516}

Mlig455_037503 {REF} {Length: 1172} {RNA1509_3092} {RNA1310_28554} {RNA815_6516}
5. MligTC455_25529 321 6.69 Mlig455_037673, Mlig455_037779

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.763

 1.799 0.842 - - 0.957 - -

Mlig455_037673 {REF} {Length: 4400} {RNA1509_19526} {RNA1310_4986.1} {RNA815_14607}

Mlig455_037779 {REF} {Length: 4337} {RNA1509_19526} {RNA1310_4986.1} {RNA815_14607}
6. MligTC455_17844 6149 128.11 Mlig455_024338, Mlig455_024457

Neo: -

Age: -

 ARL1 1.78 - - - 0.963 0.817 -

Mlig455_024338 {REF} {Length: 1215} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_59399} {RNA1310_27992, RNA1509_59399} {RNA1509_59399, RNA815_12253}

Mlig455_024457 {REF} {Length: 1207} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=254.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=55.1]; Ras family [PF00071.24, score=52.3]; G-protein alpha subunit [PF00503.22, score=42.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=33.3]; 50S ribosome-binding GTPase [PF01926.25, score=25.1]; RsgA GTPase [PF03193.18, score=19.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.6]} {Human: ENSG00000120805, ARL1, ADP ribosylation factor like GTPase 1, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060904, Arl1, ADP-ribosylation factor-like 1, [Score=284, Expect=5e-99]} {Dmel: FBgn0000115, Arl1, ADP ribosylation factor-like 1, [Score=296, Expect=5e-104]} {Celegans: WBGene00000187, arl-1, ADP-ribosylation factor-like protein 1, [Score=293, Expect=1e-102]} {Smed: dd_Smed_v6_5310_0_1, dd_Smed_v6_5310_0_1, [RH, Score=330, Expect=4e-117]} {RNA1509_11836, RNA1509_5255} {RNA1310_27992, RNA1509_11836, RNA1509_5255} {RNA1509_11836, RNA1509_5255, RNA815_12253}
7. MligTC455_11888 142 2.96 Mlig455_065110

Neo: -

Age: -

 PCDH11X 1.717 - - - 0.962 - 0.755 Mlig455_065110 {REF} {Length: 4103} {Pfam: Cadherin domain [PF00028.19, score=207.8]; Cadherin-like [PF16184.7, score=34.7]; Cadherin-like [PF08266.14, score=23.4]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=273, Expect=3e-74]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=271, Expect=1e-73]} {Mouse: ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=278, Expect=6e-76]} {Dmel: FBgn0261574, kug, kugelei, [Score=177, Expect=4e-44]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=144, Expect=2e-34]} {Smed: dd_Smed_v6_12023_0_1, dd_Smed_v6_12023_0_1, [Score=322, Expect=1e-92]} {RNA1509_38191} {RNA1310_74429} {RNA815_12734}
8. MligTC455_24134 222 4.63 Mlig455_032958

Neo: -

Age: -

Region-enriched R5: 1.728/0.03718

 1.713 - - - 0.953 - 0.760 Mlig455_032958 {REF} {Length: 4207} {TRANSSPLICED} {Pfam: Autophagy-related protein 13 [PF10033.11, score=33.0]} {Dmel: FBgn0261108, Atg13, Autophagy-related 13, [Score=62.4, Expect=3e-10]} {Smed: dd_Smed_v6_4306_0_1, dd_Smed_v6_4306_0_1, [RH, Score=83.2, Expect=2e-17]} {RNA1509_53407} {RNA1310_19264} {RNA815_25372}
9. MligTC455_17358 192 4.01 Mlig455_015662

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_015662 {REF} {Length: 1607} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_21460, RNA1509_36891} {RNA1310_16370, RNA1509_36891} {RNA1509_36891, RNA815_12658}
10. MligTC455_13091 105 2.18 Mlig455_005443

Neo: -

Age: -

 0.963 - - - 0.963 - - Mlig455_005443 {REF} {Length: 2879} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=31.3]} {RNA1509_41201} {RNA1310_51571} {RNA815_38501}
11. MligTC455_53096 1330 27.71 Mlig455_068899

Neo: -

Age: Down-Up-Down

 SEC14L2 0.963 - - - 0.963 - - Mlig455_068899 {REF} {Length: 1803} {Pfam: CRAL/TRIO domain [PF00650.22, score=99.2]; Golgi-dynamics membrane-trafficking [PF13897.8, score=36.4]} {Human: ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [RH, Score=278, Expect=1e-89]; ENSG00000133488, SEC14L4, SEC14 like lipid binding 4, [RH, Score=269, Expect=4e-86]; ENSG00000100012, SEC14L3, SEC14 like lipid binding 3, [RH, Score=266, Expect=6e-85]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0035146, CG13893, [RH, Score=190, Expect=5e-56]} {Celegans: WBGene00019268, H41C03.1, [RH, Score=119, Expect=1e-29]} {Smed: dd_Smed_v6_11513_1_1, dd_Smed_v6_11513_1_1, [RH, Score=282, Expect=3e-92]} {RNA1509_13482} {RNA1310_16456, RNA1509_13482} {RNA1509_13482, RNA815_6612}
12. MligTC455_41411 20038 417.45 Mlig455_034270, Mlig455_034308

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=-1.434

 0.96 - - - 0.960 - -

Mlig455_034270 {REF} {Length: 1150} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_29224} {RNA1310_35556} {RNA815_17023}

Mlig455_034308 {REF} {Length: 1449} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556} {RNA815_17023}
13. MligTC455_41412 20050 417.71 Mlig455_067306, Mlig455_067322

Neo: -

Age: Down-Up-Down

 0.959 - - - 0.959 - -

Mlig455_067306 {REF} {Length: 1224} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556} {RNA815_17023}

Mlig455_067322 {REF} {Length: 1115} {Pfam: Dynein light chain type 1 [PF01221.20, score=64.4]; EF-hand domain pair [PF13499.8, score=32.5]; EF hand [PF00036.34, score=31.3]; EF-hand domain [PF13405.8, score=27.7]; EF-hand domain [PF14658.8, score=20.7]; EF-hand domain pair [PF13833.8, score=18.8]} {Dmel: FBgn0011760, ctp, cut up, [Score=43.5, Expect=1e-05]} {Celegans: WBGene00010888, dlc-2, Probable dynein light chain 2, cytoplasmic, [Score=45.4, Expect=1e-06]} {Smed: dd_Smed_v6_6707_0_3, dd_Smed_v6_6707_0_3, [RH, Score=153, Expect=6e-47]} {RNA1509_57533} {RNA1310_35556, RNA1509_57533} {RNA1509_57533, RNA815_17023}
14. MligTC455_52186 74 1.54 Mlig455_052561

Neo: -

Age: -

 0.959 - - - 0.959 - - Mlig455_052561 {REF} {Length: 2048} {TRANSSPLICED} {RNA1509_39228} {RNA1310_14919.1} {RNA815_10182}
15. MligTC455_28577 810 16.88 Mlig455_008000

Neo: -

Age: logFC(26M/2M)=0.283

Region-enriched R5: 1.167/0.00070

 NFYC 0.958 - - - 0.958 - - Mlig455_008000 {REF} {Length: 3111} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=53.9]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=44.7]} {Human: ENSG00000066136, NFYC, nuclear transcription factor Y subunit gamma, [RH, Score=147, Expect=5e-39]} {Mouse: ENSMUSG00000032897, Nfyc, nuclear transcription factor-Y gamma, [RH, Score=146, Expect=1e-39]} {Dmel: FBgn0029905, Nf-YC, Nuclear factor Y-box C, [RH, Score=135, Expect=2e-34]} {Celegans: WBGene00017742, nfyc-1, Nuclear transcription factor Y subunit gamma, [RH, Score=102, Expect=5e-25]} {Smed: dd_Smed_v6_5610_0_1, dd_Smed_v6_5610_0_1, [Score=166, Expect=3e-47]} {RNA1509_12703} {RNA1310_30593, RNA1509_12703} {RNA1509_12703, RNA815_21912}
16. MligTC455_26629 820 17.09 Mlig455_011082

Neo: -

Age: -

 ACVR1 0.957 - - - 0.957 - - Mlig455_011082 {REF} {Length: 3798} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=93.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=88.2]; Activin types I and II receptor domain [PF01064.25, score=21.4]} {Human: ENSG00000115170, ACVR1, activin A receptor type 1, [RH, Score=325, Expect=2e-104]} {Mouse: ENSMUSG00000026836, Acvr1, activin A receptor, type 1, [Score=322, Expect=3e-103]; ENSMUSG00000052430, Bmpr1b, bone morphogenetic protein receptor, type 1B, [Score=310, Expect=2e-98]} {Dmel: FBgn0003317, sax, saxophone, [Score=300, Expect=1e-94]} {Celegans: WBGene00004860, sma-6, Serine/threonine-protein kinase sma-6, [RH, Score=232, Expect=8e-68]} {Smed: dd_Smed_v6_7151_0_1, dd_Smed_v6_7151_0_1, [RH, Score=320, Expect=2e-101]} {RNA1509_17349, RNA1509_43249, RNA1509_43389} {RNA1310_7324, RNA1509_17349, RNA1509_43249, RNA1509_43389} {RNA1509_17349, RNA1509_43249, RNA1509_43389, RNA815_2768.1}
17. MligTC455_44780 158 3.3 Mlig455_033996

Neo: -

Age: -

 0.957 - - - 0.957 - - Mlig455_033996 {REF} {Length: 3484} {RNA1509_24113} {RNA1310_4423, RNA1509_24113} {RNA1509_24113, RNA815_4918.1}
18. MligTC455_44781 316 6.59 Mlig455_034005, Mlig455_060385

Neo: -

Age: -

 0.957 - - - 0.957 - -

Mlig455_034005 {REF} {Length: 3206} {RNA1509_24113} {RNA1310_4423} {RNA815_4918.1}

Mlig455_060385 {REF} {Length: 3645} {RNA1509_24113} {RNA1310_4423} {RNA815_4918.1}
19. MligTC455_45908 12042 250.87 Mlig455_024683, Mlig455_044066

Neo: -

Age: Down-Up-Up

Regeneration-upregulated BL: 1.085

Regeneration-enriched BL: 1.085

 0.957 - - - 0.957 - -

Mlig455_024683 {REF} {Length: 2263} {RNA1509_24674, RNA1509_2704} {RNA1310_28299.1, RNA1509_24674, RNA1509_2704} {RNA1509_24674, RNA1509_2704, RNA815_13103}

Mlig455_044066 {REF} {Length: 1264} {RNA1509_12941, RNA1509_48414} {RNA1310_28299.1, RNA1509_12941, RNA1509_48414} {RNA1509_12941, RNA1509_48414, RNA815_13103}
20. MligTC455_49026 215 4.48 Mlig455_037206

Neo: -

Age: Down-Up-Down

 HSPG2 0.957 - - - 0.957 - - Mlig455_037206 {REF} {Length: 4399} {Pfam: Immunoglobulin domain [PF13927.8, score=184.9]; Immunoglobulin domain [PF13895.8, score=134.5]; Immunoglobulin I-set domain [PF07679.18, score=112.6]; Immunoglobulin domain [PF00047.27, score=95.1]; Immunoglobulin V-set domain [PF07686.19, score=61.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.0]; Fibronectin type III domain [PF00041.23, score=37.5]; Immunoglobulin domain [PF18452.3, score=35.0]; C17orf99 Ig domain [PF17736.3, score=23.3]} {Human: ENSG00000142798, HSPG2, heparan sulfate proteoglycan 2, [Score=117, Expect=8e-26]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=132, Expect=2e-30]} {Dmel: FBgn0000547, ed, echinoid, [Score=217, Expect=3e-57]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=138, Expect=6e-33]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=162, Expect=2e-40]} {RNA1509_31910} {RNA1310_43699} {RNA815_44505}
21. MligTC455_21641 362 7.53 Mlig455_052610

Neo: Irradiation

Age: -

 SLC6A5 0.956 - - - 0.956 - - Mlig455_052610 {REF} {Length: 3682} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=239.7]; BTB/POZ domain [PF00651.33, score=60.3]; BTB And C-terminal Kelch [PF07707.17, score=45.9]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=22.0]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=192, Expect=1e-50]; ENSG00000196517, SLC6A9, solute carrier family 6 member 9, [Score=189, Expect=3e-50]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=191, Expect=1e-50]; ENSMUSG00000028542, Slc6a9, solute carrier family 6 (neurotransmitter transporter, glycine), member 9, [Score=183, Expect=7e-51]} {Dmel: FBgn0034911, CG5549, [Score=203, Expect=4e-54]} {Celegans: WBGene00004905, snf-6, Sodium-dependent acetylcholine transporter, [Score=173, Expect=4e-45]} {Smed: dd_Smed_v6_10458_0_1, dd_Smed_v6_10458_0_1, [Score=191, Expect=2e-51]} {RNA1509_27437} {RNA1310_11200.1} {RNA815_3821}
22. MligTC455_47436 119 2.48 Mlig455_049081

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.598

 SYT14 0.952 - - - 0.952 - - Mlig455_049081 {REF} {Length: 1963} {Pfam: C2 domain [PF00168.32, score=35.1]} {Human: ENSG00000143469, SYT14, synaptotagmin 14, [Score=173, Expect=7e-48]; ENSG00000139973, SYT16, synaptotagmin 16, [Score=169, Expect=2e-45]} {Mouse: ENSMUSG00000016200, Syt14, synaptotagmin XIV, [Score=169, Expect=2e-46]} {Dmel: FBgn0261086, Syt14, Synaptotagmin 14, [Score=135, Expect=2e-34]} {Smed: dd_Smed_v6_9164_0_3, dd_Smed_v6_9164_0_3, [Score=103, Expect=5e-24]} {RNA1509_43544} {RNA1310_28789} {RNA815_16692}
23. MligTC455_09482 43 0.89 Mlig455_057221

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_057221 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_70094} {RNA815_13624.1}
24. MligTC455_18472 662 13.79 Mlig455_065928

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_065928 {REF} {Length: 2444} {RNA1509_24487} {RNA1310_16089.1} {RNA815_13960}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA