TomoSeq data search

Data search

Results for MligTC455_17864

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_17864	106	2.22	Mlig455_053276, Mlig455_068205	Neo: - Age: -	TRPM1	Mlig455_053276 {REF} {Length: 4440} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.3]; Ankyrin repeats (3 copies) [PF12796.9, score=56.1]; Ion transport protein [PF00520.33, score=48.5]; Ankyrin repeat [PF13606.8, score=45.7]; Ankyrin repeats (many copies) [PF13857.8, score=41.3]; Ankyrin repeat [PF00023.32, score=37.3]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=4e-25]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=3e-25]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=115, Expect=2e-25]} {Dmel: FBgn0260005, wtrw, water witch, [Score=54.3, Expect=8e-07]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080} Mlig455_068205 {REF} {Length: 4167} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.8]; Ankyrin repeats (3 copies) [PF12796.9, score=55.3]; Ion transport protein [PF00520.33, score=48.0]; Ankyrin repeat [PF13606.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=40.2]; Ankyrin repeat [PF00023.32, score=37.4]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=109, Expect=2e-23]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17864

106

2.22

Mlig455_053276, Mlig455_068205

Neo: -

Age: -

TRPM1

Mlig455_053276 {REF} {Length: 4440} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.3]; Ankyrin repeats (3 copies) [PF12796.9, score=56.1]; Ion transport protein [PF00520.33, score=48.5]; Ankyrin repeat [PF13606.8, score=45.7]; Ankyrin repeats (many copies) [PF13857.8, score=41.3]; Ankyrin repeat [PF00023.32, score=37.3]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=4e-25]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=3e-25]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=115, Expect=2e-25]} {Dmel: FBgn0260005, wtrw, water witch, [Score=54.3, Expect=8e-07]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080}

Mlig455_068205 {REF} {Length: 4167} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.8]; Ankyrin repeats (3 copies) [PF12796.9, score=55.3]; Ion transport protein [PF00520.33, score=48.0]; Ankyrin repeat [PF13606.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=40.2]; Ankyrin repeat [PF00023.32, score=37.4]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=109, Expect=2e-23]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080}

Cumulative graph for MligTC455_17864

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.643	2.215	0.41154	1.00000
RegionR2	1.469	2.215	0.25690	0.63738
RegionR3	2.185	2.215	0.03233	0.31076
RegionR4	0.199	2.215	0.62015	0.93018
RegionR5	1.441	2.215	0.12691	0.35998
RegionR6	1.186	2.215	0.24996	0.83605
RegionR7	-4.237	2.215	0.99978	1.00000
RegionR8	-3.886	2.215	0.99964	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.712	2.215	0.32162	1.00000
RegenerationR2	-0.38	2.215	0.64769	0.93520
RegenerationR3	-0.094	2.215	0.91282	1.00000
RegenerationR4	0.948	2.215	0.36677	0.79134
RegenerationR5	-0.223	2.215	0.78334	0.98259
RegenerationR6	0.154	2.215	0.86590	1.00000
RegenerationBL	-2.36	2.215	0.99969	1.00000
RegenerationTP	-0.338	2.215	0.99997	1.00000

Genes with expression patterns similar to MligTC455_17864

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17864	106	2.22	Mlig455_053276, Mlig455_068205	Neo: - Age: -	TRPM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053276 {REF} {Length: 4440} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.3]; Ankyrin repeats (3 copies) [PF12796.9, score=56.1]; Ion transport protein [PF00520.33, score=48.5]; Ankyrin repeat [PF13606.8, score=45.7]; Ankyrin repeats (many copies) [PF13857.8, score=41.3]; Ankyrin repeat [PF00023.32, score=37.3]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=4e-25]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=115, Expect=3e-25]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=115, Expect=2e-25]} {Dmel: FBgn0260005, wtrw, water witch, [Score=54.3, Expect=8e-07]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080} Mlig455_068205 {REF} {Length: 4167} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=58.8]; Ankyrin repeats (3 copies) [PF12796.9, score=55.3]; Ion transport protein [PF00520.33, score=48.0]; Ankyrin repeat [PF13606.8, score=44.5]; Ankyrin repeats (many copies) [PF13857.8, score=40.2]; Ankyrin repeat [PF00023.32, score=37.4]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=109, Expect=2e-23]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=177, Expect=4e-45]} {RNA1310_17511} {RNA815_39080}
2.	MligTC455_44497	236	4.91	Mlig455_031854, Mlig455_031940	Neo: - Age: - Region-enriched R3: 5.732/0.00003 Region-enriched R4: 3.324/0.03619 Regeneration-depleted R6: -7.561 Regeneration-depleted R3: -4.972		1.726	-	-	-	-	0.763	0.963	Mlig455_031854 {REF} {Length: 1155} {RNA1509_13951} {RNA1310_41432} {RNA815_19045.1} Mlig455_031940 {REF} {Length: 1141} {RNA1509_13951} {RNA1310_41432} {RNA815_19045.1}
3.	MligTC455_17649	19	0.4	Mlig455_035862, Mlig455_035900	Neo: - Age: -		1.673	-	0.718	-	-	-	0.955	Mlig455_035862 {REF} {Length: 1528} {RNA1310_61164} Mlig455_035900 {REF} {Length: 2152} {RNA1310_61164}
4.	MligTC455_09174	199	4.14	Mlig455_042361	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.434	FANK1	0.978	-	-	-	0.978	-	-	Mlig455_042361 {REF} {Length: 3829} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=68.0]; Ankyrin repeats (many copies) [PF13857.8, score=62.6]; Ankyrin repeats (many copies) [PF13637.8, score=51.9]; Ankyrin repeat [PF00023.32, score=44.3]; Ankyrin repeat [PF13606.8, score=41.9]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=70.9, Expect=2e-12]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [Score=65.9, Expect=8e-11]} {Dmel: FBgn0029137, Patsas, [Score=58.2, Expect=3e-08]} {Smed: dd_Smed_v6_2072_0_2, dd_Smed_v6_2072_0_2, [Score=53.9, Expect=5e-07]} {RNA1509_16273} {RNA1310_2568.2} {RNA815_919.1}
5.	MligTC455_42288	91	1.89	Mlig455_008158, Mlig455_008196	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_008158 {REF} {Length: 282} {NoTransDecoderORF} {RNA1310_118368} Mlig455_008196 {REF} {Length: 259} {NoTransDecoderORF} {RNA1310_118368}
6.	MligTC455_02476	16	0.33	Mlig455_045146, Mlig455_045180	Neo: - Age: - Region-enriched R4: 6.322/0.01348		0.964	-	-	-	-	-	0.964	Mlig455_045146 {REF} {Length: 412} {RNA1310_108476} {RNA815_36570} Mlig455_045180 {REF} {Length: 577} {TRANSSPLICED} {RNA1310_108476} {RNA815_36570}
7.	MligTC455_12217	33	0.68	Mlig455_068732	Neo: - Age: Down-Up-Up		0.964	-	-	-	-	-	0.964	Mlig455_068732 {REF} {Length: 3365} {Pfam: High molecular weight glutenin subunit [PF03157.15, score=22.1]} {RNA1310_29196.2} {RNA815_33399}
8.	MligTC455_45356	12	0.25	Mlig455_037521	Neo: - Age: Down-Up-Up		0.963	-	-	-	-	-	0.963	Mlig455_037521 {REF} {Length: 941} {Pfam: HYD1 signature containing ADP-ribosyltransferase [PF15633.8, score=34.8]} {RNA1509_7973} {RNA1310_51349} {RNA815_9390.1}
9.	MligTC455_33018	540	11.25	Mlig455_065016	Neo: Int S/G2/M Age: -	SLX4	0.95	-	-	-	-	0.950	-	Mlig455_065016 {REF} {Length: 3818} {TRANSSPLICED} {Human: ENSG00000188827, SLX4, SLX4 structure-specific endonuclease subunit, [RH, Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000039738, Slx4, SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae), [Score=50.1, Expect=1e-05]} {RNA1509_23641, RNA1509_23757} {RNA1310_6766, RNA1509_23641, RNA1509_23757} {RNA1509_23641, RNA1509_23757, RNA815_4724}