Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_17982 | 97 | 2.01 | Mlig455_002775 | Neo: Int S/G2/M Age: Up-Down-Up |
HMCES | Mlig455_002775 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: SOS response associated peptidase (SRAP) [PF02586.16, score=191.8]} {Human: ENSG00000183624, HMCES, 5-hydroxymethylcytosine binding, ES cell specific, [RH, Score=172, Expect=4e-50]} {Mouse: ENSMUSG00000030060, Hmces, 5-hydroxymethylcytosine (hmC) binding, ES cell specific, [RH, Score=166, Expect=6e-48]} {Dmel: FBgn0037656, CG11986, [RH, Score=147, Expect=6e-41]} {Smed: dd_Smed_v6_10093_0_1, dd_Smed_v6_10093_0_1, [RH, Score=155, Expect=3e-45]} {RNA1509_52799} {RNA1310_25228, RNA1509_52799} {RNA1509_52799, RNA815_18744} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -5.865 | 2.125 | 0.19529 | 0.83003 | |
RegionR2 | 1.923 | 2.125 | 0.09886 | 0.38631 | |
RegionR3 | 0.37 | 2.125 | 0.70031 | 1.00000 | |
RegionR4 | 0.706 | 2.125 | 0.54893 | 0.87007 | |
RegionR5 | 0.915 | 2.125 | 0.33939 | 0.68633 | |
RegionR6 | 0.274 | 2.125 | 0.75441 | 1.00000 | |
RegionR7 | 1.529 | 2.125 | 0.19382 | 0.79936 | |
RegionR8 | 0.148 | 2.125 | 0.83471 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 2.346 | 2.125 | 1.00000 | 1.00000 | |
RegenerationR2 | -1.876 | 2.125 | 0.05134 | 0.37425 | |
RegenerationR3 | 0.558 | 2.125 | 0.53351 | 0.87419 | |
RegenerationR4 | -0.462 | 2.125 | 0.62488 | 0.92200 | |
RegenerationR5 | -0.041 | 2.125 | 0.97585 | 1.00000 | |
RegenerationR6 | 0.702 | 2.125 | 0.46668 | 0.78221 | |
RegenerationBL | 0.647 | 2.125 | 0.61994 | 0.96274 | |
RegenerationTP | -0.251 | 2.125 | 0.85199 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_17982 | 97 | 2.01 | Mlig455_002775 | Neo: Int S/G2/M Age: Up-Down-Up |
HMCES | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002775 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: SOS response associated peptidase (SRAP) [PF02586.16, score=191.8]} {Human: ENSG00000183624, HMCES, 5-hydroxymethylcytosine binding, ES cell specific, [RH, Score=172, Expect=4e-50]} {Mouse: ENSMUSG00000030060, Hmces, 5-hydroxymethylcytosine (hmC) binding, ES cell specific, [RH, Score=166, Expect=6e-48]} {Dmel: FBgn0037656, CG11986, [RH, Score=147, Expect=6e-41]} {Smed: dd_Smed_v6_10093_0_1, dd_Smed_v6_10093_0_1, [RH, Score=155, Expect=3e-45]} {RNA1509_52799} {RNA1310_25228, RNA1509_52799} {RNA1509_52799, RNA815_18744} |
2. | MligTC455_08633 | 45 | 0.93 | Mlig455_012424 | Neo: - Age: - Region-enriched R4: 6.767/0.01731 |
1.679 | - | - | 0.727 | 0.952 | - | - | Mlig455_012424 {REF} {Length: 975} {TRANSSPLICED} {RNA1509_43208} {RNA1310_19732} {RNA815_10956} | |
3. | MligTC455_34523 | 67 | 1.39 | Mlig455_018670, Mlig455_038483, Mlig455_046083, Mlig455_046711, Mlig455_052309, Mlig455_070731 | Neo: - Age: - |
0.993 | - | - | - | 0.993 | - | - | Mlig455_018670 {REF} {Length: 384} {NoTransDecoderORF} {RNA1509_20661} {RNA1310_34086} {RNA815_25565} Mlig455_038483 {REF} {Length: 265} {NoTransDecoderORF} {RNA815_25565} Mlig455_046083 {REF} {Length: 197} {NoTransDecoderORF} {RNA815_25565} Mlig455_046711 {REF} {Length: 734} {NoTransDecoderORF} {RNA1310_82893} {RNA815_25565} Mlig455_052309 {REF} {Length: 778} {NoTransDecoderORF} {RNA815_25565} Mlig455_070731 {REF} {Length: 204} {NoTransDecoderORF} {RNA815_25565} |
|
4. | MligTC455_11767 | 58 | 1.22 | Mlig455_045883 | Neo: - Age: Down-Down-Up |
0.987 | - | - | 0.987 | - | - | - | Mlig455_045883 {REF} {Length: 1461} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=32.6]} {RNA1310_37718} {RNA815_38330} | |
5. | MligTC455_17784 | 11 | 0.23 | Mlig455_001273 | Neo: - Age: - Region-enriched R4: 2.910/0.04306 |
GABBR1 | 0.971 | - | - | 0.971 | - | - | - | Mlig455_001273 {REF} {Length: 1909} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=119.7]; Receptor family ligand binding region [PF01094.30, score=29.4]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=3e-43]; ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=166, Expect=1e-43]; ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=165, Expect=5e-43]} {Dmel: FBgn0260446, GABA-B-R1, metabotropic GABA-B receptor subtype 1, [Score=175, Expect=1e-46]} {Celegans: WBGene00021528, gbb-1, GABA B receptor subunit; GABAB1 receptor subunit, [Score=159, Expect=2e-41]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=97.1, Expect=2e-22]} {RNA1509_32781} {RNA1310_75354} {RNA815_28313} |
6. | MligTC455_17596 | 37 | 0.77 | Mlig455_007172 | Neo: - Age: - |
0.97 | - | - | - | 0.970 | - | - | Mlig455_007172 {REF} {Length: 1102} {RNA1509_49095} {RNA1310_50088} {RNA815_56889.1} | |
7. | MligTC455_18573 | 71 | 1.47 | Mlig455_056936 | Neo: Irradiation Age: - |
INTS14 | 0.97 | - | - | 0.970 | - | - | - | Mlig455_056936 {REF} {Length: 2141} {TRANSSPLICED} {Pfam: Integrator complex subunit 14 [PF19435.1, score=219.0]; von Willebrand factor type A domain [PF13519.8, score=35.9]} {Human: ENSG00000138614, INTS14, integrator complex subunit 14, [RH, Score=220, Expect=2e-64]} {Mouse: ENSMUSG00000034263, Ints14, integrator complex subunit 14, [RH, Score=221, Expect=2e-65]} {Dmel: FBgn0031314, IntS14, Integrator 14, [RH, Score=149, Expect=7e-39]} {Smed: dd_Smed_v6_10096_0_1, dd_Smed_v6_10096_0_1, [RH, Score=82.4, Expect=1e-16]} {RNA1509_5972} {RNA1310_3852.1, RNA1509_5972} {RNA1509_5972, RNA815_12770} |
8. | MligTC455_09066 | 20 | 0.41 | Mlig455_009778, Mlig455_054927 | Neo: - Age: - |
MON1A | 0.969 | - | - | - | 0.969 | - | - | Mlig455_009778 {REF} {Length: 2317} {Pfam: First Longin domain of FUZ, MON1 and HPS1 [PF19036.2, score=92.2]; Second Longin domain of FUZ, MON1 and HPS1 [PF19037.2, score=77.2]; Third Longin domain of FUZ, MON1 and HPS1 [PF19038.2, score=74.2]} {Human: ENSG00000164077, MON1A, MON1 homolog A, secretory trafficking associated, [RH, Score=354, Expect=3e-114]} {Mouse: ENSMUSG00000032583, Mon1a, MON1 homolog A, secretory traffciking associated, [RH, Score=356, Expect=4e-115]} {Dmel: FBgn0031640, Mon1, Monensin sensitivity 1, [RH, Score=324, Expect=2e-103]} {Celegans: WBGene00018321, sand-1, SAND endocytosis protein family, [RH, Score=160, Expect=5e-43]} {Smed: dd_Smed_v6_8868_0_2, dd_Smed_v6_8868_0_2, [RH, Score=319, Expect=7e-102]} {RNA1509_13646} {RNA1310_8997} {RNA815_2959} Mlig455_054927 {REF} {Length: 2344} {Pfam: First Longin domain of FUZ, MON1 and HPS1 [PF19036.2, score=92.2]; Second Longin domain of FUZ, MON1 and HPS1 [PF19037.2, score=77.1]; Third Longin domain of FUZ, MON1 and HPS1 [PF19038.2, score=74.0]} {Human: ENSG00000164077, MON1A, MON1 homolog A, secretory trafficking associated, [RH, Score=354, Expect=3e-114]} {Mouse: ENSMUSG00000032583, Mon1a, MON1 homolog A, secretory traffciking associated, [RH, Score=355, Expect=6e-115]} {Dmel: FBgn0031640, Mon1, Monensin sensitivity 1, [RH, Score=324, Expect=2e-103]} {Celegans: WBGene00018321, sand-1, SAND endocytosis protein family, [RH, Score=160, Expect=7e-43]} {Smed: dd_Smed_v6_8868_0_2, dd_Smed_v6_8868_0_2, [RH, Score=321, Expect=1e-102]} {RNA1509_13646, RNA1509_54857} {RNA1310_8997, RNA1509_54857} {RNA1509_54857, RNA815_2959} |
9. | MligTC455_54150 | 45 | 0.93 | Mlig455_040594 | Neo: - Age: - |
0.964 | - | - | - | 0.964 | - | - | Mlig455_040594 {REF} {Length: 2865} {TRANSSPLICED} {RNA1310_34799.1} {RNA815_13806} | |
10. | MligTC455_37763 | 46 | 0.95 | Mlig455_039133 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_039133 {REF} {Length: 822} {NoTransDecoderORF} | |
11. | MligTC455_11858 | 35 | 0.72 | Mlig455_005232 | Neo: - Age: - |
0.959 | - | - | - | 0.959 | - | - | Mlig455_005232 {REF} {Length: 2074} {Pfam: Zinc knuckle [PF00098.25, score=31.3]} {RNA1509_38224, RNA1509_57674} {RNA1310_13132, RNA1509_38224, RNA1509_57674} {RNA1509_38224, RNA1509_57674, RNA815_23258.1} | |
12. | MligTC455_18384 | 52 | 1.08 | Mlig455_033464, Mlig455_033480 | Neo: - Age: - |
CHRNB3 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_033464 {REF} {Length: 3273} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=101.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=28.0]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=112, Expect=2e-26]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=107, Expect=4e-25]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=102, Expect=2e-23]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=95.5, Expect=5e-21]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=98.2, Expect=5e-22]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=90.5, Expect=1e-19]} {RNA1509_28510} {RNA1310_44183.1} {RNA815_32188} Mlig455_033480 {REF} {Length: 904} {RNA1310_131495} |
13. | MligTC455_44551 | 119 | 2.48 | Mlig455_064247 | Neo: - Age: Up-Down-Down |
PRDX1 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_064247 {REF} {Length: 1961} {TRANSSPLICED} {Pfam: AhpC/TSA family [PF00578.23, score=130.3]; Redoxin [PF08534.12, score=67.5]; C-terminal domain of 1-Cys peroxiredoxin [PF10417.11, score=56.0]} {Human: ENSG00000117450, PRDX1, peroxiredoxin 1, [RH, Score=298, Expect=8e-102]} {Mouse: ENSMUSG00000028691, Prdx1, peroxiredoxin 1, [RH, Score=294, Expect=1e-100]} {Dmel: FBgn0040309, Jafrac1, thioredoxin peroxidase 1, [RH, Score=281, Expect=8e-96]} {Celegans: WBGene00006434, prdx-2, PeRoxireDoXin, [RH, Score=282, Expect=4e-96]} {Smed: dd_Smed_v6_7781_0_2, dd_Smed_v6_7781_0_2, [RH, Score=291, Expect=7e-100]} {RNA1509_29776} {RNA1310_37433} {RNA815_22691} |
14. | MligTC455_18132 | 9 | 0.19 | Mlig455_000420 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_000420 {REF} {Length: 3732} {Pfam: Myb-like DNA-binding domain [PF00249.33, score=22.3]} {Smed: dd_Smed_v6_6124_0_1, dd_Smed_v6_6124_0_1, [Score=110, Expect=3e-26]} {RNA1509_20088} {RNA1310_14330} {RNA815_29842} | |
15. | MligTC455_33896 | 34 | 0.7 | Mlig455_055659 | Neo: Irradiation Age: Up-Down-Up |
TEX14 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_055659 {REF} {Length: 6086} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.8]; Protein kinase domain [PF00069.27, score=65.3]; Ankyrin repeats (many copies) [PF13637.8, score=52.6]; Ankyrin repeat [PF00023.32, score=51.3]; Ankyrin repeats (3 copies) [PF12796.9, score=50.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.1]; Ankyrin repeat [PF13606.8, score=32.0]} {Human: ENSG00000121101, TEX14, testis expressed 14, intercellular bridge forming factor, [RH, Score=169, Expect=1e-41]} {Mouse: ENSMUSG00000010342, Tex14, testis expressed gene 14, [RH, Score=167, Expect=4e-41]} {Dmel: FBgn0036801, MYPT-75D, [Score=68.6, Expect=4e-11]} {Celegans: WBGene00000565, cnt-1, Arf-GAP with ANK repeat and PH domain-containing protein cnt-1 Truncated ctn-1, [RH, Score=68.9, Expect=6e-12]} {Smed: dd_Smed_v6_10115_0_1, dd_Smed_v6_10115_0_1, [Score=69.3, Expect=2e-11]} {RNA1509_12042} {RNA1310_1137.2} {RNA815_6538} |
16. | MligTC455_45864 | 149 | 3.1 | Mlig455_041438 | Neo: Int S/G2/M Age: Down-Up-Up |
0.952 | - | - | - | 0.952 | - | - | Mlig455_041438 {REF} {Length: 4261} {RNA1509_59330} {RNA1310_2367} {RNA815_1531} | |
17. | MligTC455_25157 | 40 | 0.84 | Mlig455_046185 | Neo: - Age: - |
YWHAE | 0.951 | - | - | - | - | - | 0.951 | Mlig455_046185 {REF} {Length: 1390} {TRANSSPLICED} {Pfam: 14-3-3 protein [PF00244.22, score=348.0]; Sodium:neurotransmitter symporter family [PF00209.20, score=222.5]} {Human: ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]; ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [RH, Score=384, Expect=2e-132]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [RH, Score=384, Expect=1e-132]} {Dmel: FBgn0020238, 14-3-3epsilon, [RH, Score=384, Expect=1e-132]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=311, Expect=6e-104]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [RH, Score=347, Expect=4e-118]} {RNA1509_5197} {RNA1310_6272.1} {RNA815_5359.1} |
18. | MligTC455_26038 | 13 | 0.26 | Mlig455_026530 | Neo: - Age: Up-Down-Up |
0.95 | - | - | - | 0.950 | - | - | Mlig455_026530 {REF} {Length: 9189} {Pfam: Transcription factor BRX N-terminal domain [PF13713.8, score=20.0]} {RNA1509_12133} {RNA1310_11930} {RNA815_40541} |