TomoSeq data search

Data search

Results for MligTC455_17994

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17994

372

7.75

Mlig455_007243

Neo: -

Age: logFC(26M/2M)=0.335

PRR9

Mlig455_007243 {REF} {Length: 1587} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=4e-06]} {RNA1509_25887} {RNA1310_52256, RNA1509_25887} {RNA1509_25887, RNA815_10052.1}

Cumulative graph for MligTC455_17994

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.64	3.395	0.27774	0.92881
RegionR2	0.072	3.395	0.91485	1.00000
RegionR3	0.436	3.395	0.37741	0.91059
RegionR4	-0.117	3.395	0.83006	1.00000
RegionR5	1.074	3.395	0.01079	0.06099
RegionR6	0.745	3.395	0.13495	0.66007
RegionR7	0.293	3.395	0.65544	1.00000
RegionR8	-0.863	3.395	0.39215	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.934	3.395	0.38392	1.00000
RegenerationR2	0.1	3.395	0.85046	1.00000
RegenerationR3	-0.178	3.395	0.74204	0.96149
RegenerationR4	-0.239	3.395	0.64953	0.93318
RegenerationR5	-0.484	3.395	0.29270	0.72076
RegenerationR6	-0.168	3.395	0.74904	0.95166
RegenerationBL	0.182	3.395	0.80294	1.00000
RegenerationTP	0.799	3.395	0.30490	0.75017

Genes with expression patterns similar to MligTC455_17994

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17994	372	7.75	Mlig455_007243	Neo: - Age: logFC(26M/2M)=0.335	PRR9	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007243 {REF} {Length: 1587} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=4e-06]} {RNA1509_25887} {RNA1310_52256, RNA1509_25887} {RNA1509_25887, RNA815_10052.1}
2.	MligTC455_00880	281	5.85	Mlig455_053748	Neo: - Age: -		0.975	-	-	-	-	-	0.975	Mlig455_053748 {REF} {Length: 2977} {RNA1509_44311, RNA1509_44706} {RNA1310_11174, RNA1509_44706} {RNA1509_44706, RNA815_18954}
3.	MligTC455_29555	57	1.19	Mlig455_045524	Neo: - Age: Up-Down-Down		0.971	-	-	-	-	-	0.971	Mlig455_045524 {REF} {Length: 3468} {RNA1509_43258} {RNA1310_5727.1, RNA1509_43258} {RNA1509_43258, RNA815_4906.1}
4.	MligTC455_24322	131	2.73	Mlig455_019412	Neo: - Age: Down-Down-Up Region-enriched R5: 2.189/0.04298	ANKMY2	0.966	-	-	-	-	-	0.966	Mlig455_019412 {REF} {Length: 2261} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.3]; MYND finger [PF01753.20, score=32.0]; Ankyrin repeat [PF13606.8, score=31.2]; Ankyrin repeat [PF00023.32, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [RH, Score=254, Expect=3e-78]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [RH, Score=251, Expect=4e-77]} {Dmel: FBgn0036096, CG8003, [RH, Score=192, Expect=2e-55]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [RH, Score=137, Expect=1e-35]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [RH, Score=231, Expect=2e-70]} {RNA1509_3934} {RNA1310_13185} {RNA815_18603}
5.	MligTC455_51467	156	3.24	Mlig455_069128	Neo: - Age: Up-Up-Up, logFC(26M/2M)=1.343	TRAM1	0.963	-	-	-	-	-	0.963	Mlig455_069128 {REF} {Length: 2915} {Pfam: TLC domain [PF03798.18, score=73.6]; TRAM1-like protein [PF08390.13, score=68.0]} {Human: ENSG00000067167, TRAM1, translocation associated membrane protein 1, [RH, Score=307, Expect=5e-102]} {Mouse: ENSMUSG00000025935, Tram1, translocating chain-associating membrane protein 1, [RH, Score=311, Expect=2e-103]} {Dmel: FBgn0040340, TRAM, [RH, Score=229, Expect=8e-72]} {Celegans: WBGene00007696, tram-1, Translocating chain-associated membrane protein, [RH, Score=220, Expect=2e-68]} {Smed: dd_Smed_v6_1740_0_1, dd_Smed_v6_1740_0_1, [RH, Score=402, Expect=1e-139]} {RNA1509_14820, RNA1509_2218} {RNA1310_8399, RNA1509_14820} {RNA1509_14820, RNA815_5690}
6.	MligTC455_39242	206	4.3	Mlig455_042010	Neo: Int S/G2/M Age: -	NEK2	0.953	-	-	-	-	-	0.953	Mlig455_042010 {REF} {Length: 2678} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.1]; Kinase-like [PF14531.8, score=25.9]; ABC1 atypical kinase-like domain [PF03109.18, score=24.7]} {Human: ENSG00000117650, NEK2, NIMA related kinase 2, [RH, Score=335, Expect=4e-110]} {Mouse: ENSMUSG00000110797, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]; ENSMUSG00000026622, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [RH, Score=324, Expect=3e-106]} {Dmel: FBgn0029970, Nek2, [RH, Score=263, Expect=2e-79]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=179, Expect=3e-52]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=187, Expect=2e-55]} {RNA1509_56527} {RNA1310_29373, RNA1509_56527} {RNA1509_56527, RNA815_3391.1}
7.	MligTC455_16548	434	9.05	Mlig455_066936	Neo: - Age: Up-Down-Down	ZSWIM8	0.95	-	-	-	-	-	0.950	Mlig455_066936 {REF} {Length: 10171} {Pfam: SWIM zinc finger [PF04434.19, score=24.1]} {Human: ENSG00000214655, ZSWIM8, zinc finger SWIM-type containing 8, [RH, Score=410, Expect=2e-122]} {Mouse: ENSMUSG00000021819, Zswim8, zinc finger SWIM-type containing 8, [RH, Score=411, Expect=6e-123]} {Dmel: FBgn0085430, CG34401, [RH, Score=396, Expect=3e-117]} {Celegans: WBGene00004140, ebax-1, Elongin-B/C E3 ligase in AXon guidance, [RH, Score=249, Expect=3e-68]} {Smed: dd_Smed_v6_5222_0_1, dd_Smed_v6_5222_0_1, [RH, Score=343, Expect=1e-99]} {RNA1509_4235} {RNA1310_396.1} {RNA815_11285}

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