Data search
Results for MligTC455_16548
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16548 | 434 | 9.05 | Mlig455_066936 | Neo: - Age: Up-Down-Down |
ZSWIM8 | Mlig455_066936 {REF} {Length: 10171} {Pfam: SWIM zinc finger [PF04434.19, score=24.1]} {Human: ENSG00000214655, ZSWIM8, zinc finger SWIM-type containing 8, [RH, Score=410, Expect=2e-122]} {Mouse: ENSMUSG00000021819, Zswim8, zinc finger SWIM-type containing 8, [RH, Score=411, Expect=6e-123]} {Dmel: FBgn0085430, CG34401, [RH, Score=396, Expect=3e-117]} {Celegans: WBGene00004140, ebax-1, Elongin-B/C E3 ligase in AXon guidance, [RH, Score=249, Expect=3e-68]} {Smed: dd_Smed_v6_5222_0_1, dd_Smed_v6_5222_0_1, [RH, Score=343, Expect=1e-99]} {RNA1509_4235} {RNA1310_396.1} {RNA815_11285} |
Cumulative graph for MligTC455_16548
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.454 | 3.597 | 0.04825 | 0.52242 | |
| RegionR2 | 1.261 | 3.597 | 0.01516 | 0.13015 | |
| RegionR3 | 0.183 | 3.597 | 0.68176 | 1.00000 | |
| RegionR4 | 0.07 | 3.597 | 0.88235 | 1.00000 | |
| RegionR5 | 0.851 | 3.597 | 0.01697 | 0.08589 | |
| RegionR6 | 0.539 | 3.597 | 0.22710 | 0.80911 | |
| RegionR7 | 0.358 | 3.597 | 0.53732 | 1.00000 | |
| RegionR8 | 0.192 | 3.597 | 0.78196 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.69 | 3.597 | 0.67981 | 1.00000 | |
| RegenerationR2 | 0.001 | 3.597 | 0.99618 | 1.00000 | |
| RegenerationR3 | 0.394 | 3.597 | 0.34869 | 0.76991 | |
| RegenerationR4 | -0.022 | 3.597 | 0.95845 | 1.00000 | |
| RegenerationR5 | 0.356 | 3.597 | 0.27160 | 0.70301 | |
| RegenerationR6 | 0.47 | 3.597 | 0.26907 | 0.61945 | |
| RegenerationBL | 0.893 | 3.597 | 0.10713 | 0.38651 | |
| RegenerationTP | 0.297 | 3.597 | 0.63164 | 0.97826 |
Genes with expression patterns similar to MligTC455_16548
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16548 | 434 | 9.05 | Mlig455_066936 | Neo: - Age: Up-Down-Down |
ZSWIM8 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_066936 {REF} {Length: 10171} {Pfam: SWIM zinc finger [PF04434.19, score=24.1]} {Human: ENSG00000214655, ZSWIM8, zinc finger SWIM-type containing 8, [RH, Score=410, Expect=2e-122]} {Mouse: ENSMUSG00000021819, Zswim8, zinc finger SWIM-type containing 8, [RH, Score=411, Expect=6e-123]} {Dmel: FBgn0085430, CG34401, [RH, Score=396, Expect=3e-117]} {Celegans: WBGene00004140, ebax-1, Elongin-B/C E3 ligase in AXon guidance, [RH, Score=249, Expect=3e-68]} {Smed: dd_Smed_v6_5222_0_1, dd_Smed_v6_5222_0_1, [RH, Score=343, Expect=1e-99]} {RNA1509_4235} {RNA1310_396.1} {RNA815_11285} |
| 2. | MligTC455_16547 | 428 | 8.92 | Mlig455_002781 | Neo: - Age: Up-Down-Down |
ZSWIM8 | 4.981 | 1.000 | 1.000 | 0.988 | 0.994 | - | 0.999 | Mlig455_002781 {REF} {Length: 8373} {Pfam: SWIM zinc finger [PF04434.19, score=24.6]} {Human: ENSG00000214655, ZSWIM8, zinc finger SWIM-type containing 8, [Score=376, Expect=1e-105]} {Mouse: ENSMUSG00000021819, Zswim8, zinc finger SWIM-type containing 8, [Score=375, Expect=1e-105]} {Dmel: FBgn0085430, CG34401, [Score=377, Expect=4e-106]} {Celegans: WBGene00004140, ebax-1, Elongin-B/C E3 ligase in AXon guidance, [Score=235, Expect=6e-62]} {Smed: dd_Smed_v6_5222_0_1, dd_Smed_v6_5222_0_1, [Score=321, Expect=2e-88]} {RNA1509_4235} {RNA1310_396.1} {RNA815_11285} |
| 3. | MligTC455_42497 | 427 | 8.9 | Mlig455_025883, Mlig455_062264 | Neo: - Age: - Region-enriched R5: 1.978/0.02600 |
SOCS6 | 0.977 | - | - | - | - | - | 0.977 | Mlig455_025883 {REF} {Length: 2688} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.0]; SH2 domain [PF00017.26, score=26.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=77.4, Expect=4e-15]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=76.6, Expect=4e-15]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=77.0, Expect=3e-15]} {Celegans: WBGene00009556, F39B2.5, [Score=45.4, Expect=1e-05]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=94.4, Expect=1e-21]} {RNA1509_29098} {RNA1310_16429.1} {RNA815_12857} Mlig455_062264 {REF} {Length: 1811} {TRANSSPLICED} {Pfam: SOCS box [PF07525.18, score=33.1]; SH2 domain [PF00017.26, score=28.0]} {Human: ENSG00000170677, SOCS6, suppressor of cytokine signaling 6, [Score=80.9, Expect=3e-16]} {Mouse: ENSMUSG00000056153, Socs6, suppressor of cytokine signaling 6, [Score=80.5, Expect=2e-16]} {Dmel: FBgn0030869, Socs16D, Suppressor of Cytokine Signaling at 16D, [Score=79.0, Expect=7e-16]} {Celegans: WBGene00009556, F39B2.5, [Score=47.0, Expect=4e-06]} {Smed: dd_Smed_v6_13802_0_1, dd_Smed_v6_13802_0_1, [Score=95.1, Expect=5e-22]} {RNA1509_29098} {RNA1310_16429.1, RNA1509_29098} {RNA1509_29098, RNA815_12857} |
| 4. | MligTC455_22792 | 813 | 16.94 | Mlig455_006911 | Neo: - |
PPP1R10 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_006911 {REF} {Length: 4431} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=34.5} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=20.9]; Negative regulator of genetic competence (MecA) [PF05389.14, score=18.7]} {Human: ENSG00000204569, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000230995, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000238104, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000235291, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000206489, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000227804, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]; ENSG00000231737, PPP1R10, protein phosphatase 1 regulatory subunit 10, [RH, Score=98.6, Expect=2e-20]} {Mouse: ENSMUSG00000039220, Ppp1r10, protein phosphatase 1, regulatory subunit 10, [RH, Score=95.1, Expect=2e-19]} {Dmel: FBgn0053526, PNUTS, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_3726_0_1, dd_Smed_v6_3726_0_1, [Score=93.2, Expect=2e-19]} {RNA1509_35861, RNA1509_3759, RNA1509_41300} {RNA1310_6625, RNA1509_35861, RNA1509_41300} {RNA1509_35861, RNA1509_41300, RNA815_5489} |
| 5. | MligTC455_24322 | 131 | 2.73 | Mlig455_019412 | Neo: - Age: Down-Down-Up Region-enriched R5: 2.189/0.04298 |
ANKMY2 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_019412 {REF} {Length: 2261} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.3]; MYND finger [PF01753.20, score=32.0]; Ankyrin repeat [PF13606.8, score=31.2]; Ankyrin repeat [PF00023.32, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [RH, Score=254, Expect=3e-78]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [RH, Score=251, Expect=4e-77]} {Dmel: FBgn0036096, CG8003, [RH, Score=192, Expect=2e-55]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [RH, Score=137, Expect=1e-35]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [RH, Score=231, Expect=2e-70]} {RNA1509_3934} {RNA1310_13185} {RNA815_18603} |
| 6. | MligTC455_18094 | 181 | 3.78 | Mlig455_042157 | Neo: Int S/G2/M Age: Down-Down-Down Region-enriched R5: 2.086/0.01667 |
0.962 | - | - | - | - | - | 0.962 | Mlig455_042157 {REF} {Length: 1425} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=38.8]} {Dmel: FBgn0043002, Chrac-14, Chromatin accessibility complex 14kD protein, [RH, Score=55.8, Expect=9e-10]} {RNA1509_35988} {RNA1310_23246} {RNA815_18085} | |
| 7. | MligTC455_31541 | 217 | 4.53 | Mlig455_009621 | Neo: - Age: Up-Down-Down |
CPSF1 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_009621 {REF} {Length: 7493} {TRANSSPLICED} {Pfam: CPSF A subunit region [PF03178.17, score=217.3]; Mono-functional DNA-alkylating methyl methanesulfonate N-term [PF10433.11, score=80.2]} {Human: ENSG00000071894, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]; ENSG00000285049, CPSF1, cleavage and polyadenylation specific factor 1, [RH, Score=567, Expect=4e-173]} {Mouse: ENSMUSG00000034022, Cpsf1, cleavage and polyadenylation specific factor 1, [RH, Score=570, Expect=3e-174]} {Dmel: FBgn0024698, Cpsf160, Cleavage and polyadenylation specificity factor 160, [RH, Score=473, Expect=8e-140]} {Celegans: WBGene00022301, cpsf-1, Probable cleavage and polyadenylation specificity factor subunit 1, [RH, Score=364, Expect=5e-103]} {Smed: dd_Smed_v6_8644_0_1, dd_Smed_v6_8644_0_1, [RH, Score=468, Expect=1e-137]} {RNA1509_5909} {RNA1310_503.1} {RNA815_575.1} |
| 8. | MligTC455_32055 | 618 | 12.88 | Mlig455_040050 | Neo: - Age: - Region-enriched R5: 1.705/0.04238 |
0.957 | - | - | - | - | - | 0.957 | Mlig455_040050 {REF} {Length: 6034} {RNA1509_30489} {RNA1310_22669} {RNA815_17677} | |
| 9. | MligTC455_00880 | 281 | 5.85 | Mlig455_053748 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_053748 {REF} {Length: 2977} {RNA1509_44311, RNA1509_44706} {RNA1310_11174, RNA1509_44706} {RNA1509_44706, RNA815_18954} | |
| 10. | MligTC455_12932 | 233 | 4.86 | Mlig455_068053 | Neo: - Age: Down-Down-Up Region-enriched R2: 2.157/0.04323 |
ANKRD40 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_068053 {REF} {Length: 4350} {Pfam: OCRE domain [PF17780.3, score=45.6]; Ankyrin repeats (many copies) [PF13637.8, score=34.0]; Ankyrin repeat [PF00023.32, score=31.1]; Ankyrin repeats (3 copies) [PF12796.9, score=30.9]; Ankyrin repeats (many copies) [PF13857.8, score=25.7]; Ankyrin repeat [PF13606.8, score=19.8]} {Human: ENSG00000154945, ANKRD40, ankyrin repeat domain 40, [RH, Score=94.0, Expect=6e-20]} {Mouse: ENSMUSG00000020864, Ankrd40, ankyrin repeat domain 40, [RH, Score=93.2, Expect=7e-20]} {Dmel: FBgn0031319, CG4896, [Score=57.4, Expect=4e-08]} {Celegans: WBGene00011270, R31.2, [RH, Score=83.6, Expect=1e-16]} {Smed: dd_Smed_v6_2392_0_2, dd_Smed_v6_2392_0_2, [Score=58.2, Expect=1e-08]} {RNA1509_49616, RNA1509_49906} {RNA1310_18118, RNA1509_49906} {RNA1509_49906, RNA815_7502} |
| 11. | MligTC455_16410 | 313 | 6.52 | Mlig455_053945 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_053945 {REF} {Length: 550} {NoTransDecoderORF} {RNA1509_49687, RNA1509_58070} {RNA1310_67924, RNA1509_58070} {RNA1509_58070, RNA815_48743} | |
| 12. | MligTC455_17994 | 372 | 7.75 | Mlig455_007243 | Neo: - Age: logFC(26M/2M)=0.335 |
PRR9 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_007243 {REF} {Length: 1587} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=4e-06]} {RNA1509_25887} {RNA1310_52256, RNA1509_25887} {RNA1509_25887, RNA815_10052.1} |
Berezikov Lab - 2020-2021 © ERIBA