TomoSeq data search

Data search

Results for MligTC455_18001

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18001

30

0.62

Mlig455_049734

Neo: -

Age: -

Mlig455_049734 {REF} {Length: 684} {NoTransDecoderORF}

Cumulative graph for MligTC455_18001

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.763	0.944	0.99972	1.00000
RegionR2	-0.514	0.944	0.99987	1.00000
RegionR3	1.442	0.944	0.99985	1.00000
RegionR4	2.094	0.944	0.99986	1.00000
RegionR5	2.561	0.944	0.99990	1.00000
RegionR6	0.964	0.944	0.99996	1.00000
RegionR7	-0.351	0.944	1.00000	1.00000
RegionR8	-2.432	0.944	0.99995	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.739	0.944	0.99996	1.00000
RegenerationR2	3.454	0.944	0.07909	0.45359
RegenerationR3	2.78	0.944	0.02288	0.27349
RegenerationR4	0.968	0.944	0.37910	0.80062
RegenerationR5	0.532	0.944	0.38816	0.79019
RegenerationR6	3.559	0.944	0.06811	0.32708
RegenerationBL	3.187	0.944	0.30228	0.66573
RegenerationTP	3.691	0.944	0.52099	0.91480

Genes with expression patterns similar to MligTC455_18001

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18001	30	0.62	Mlig455_049734	Neo: - Age: -		2	-	-	-	1.000	1.000	-	Mlig455_049734 {REF} {Length: 684} {NoTransDecoderORF}
2.	MligTC455_04981	7	0.14	Mlig455_017960	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.185		0.968	-	-	-	-	0.968	-	Mlig455_017960 {REF} {Length: 1150} {RNA1509_49386} {RNA1310_62890, RNA1509_49386} {RNA1509_49386, RNA815_18096}
3.	MligTC455_11510	13	0.27	Mlig455_028783	Neo: Germline Age: Down-Down-Down, logFC(26M/2M)=-1.963		0.968	-	-	-	-	0.968	-	Mlig455_028783 {REF} {Length: 855} {Pfam: CDC45-like protein [PF02724.16, score=19.2]} {RNA1310_71340}
4.	MligTC455_10298	10	0.21	Mlig455_023027	Neo: - Age: -	ANGPTL7	0.967	-	-	-	-	0.967	-	Mlig455_023027 {REF} {Length: 1281} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.3]; PAN domain [PF00024.28, score=20.0]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=106, Expect=4e-26]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=101, Expect=2e-24]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=98.2, Expect=1e-22]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=97.1, Expect=2e-22]} {Dmel: FBgn0034160, CG5550, [Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=104, Expect=3e-25]} {RNA1310_39646} {RNA815_17918.1}
5.	MligTC455_29180	18	0.38	Mlig455_048888	Neo: - Age: Up-Up-Down	PHKG1	0.964	-	-	-	-	0.964	-	Mlig455_048888 {REF} {Length: 5051} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.3]; Kinase-like [PF14531.8, score=33.2]; Ternary complex associated domain 9 [PF19974.1, score=24.2]; PhoP regulatory network protein YrbL [PF10707.11, score=22.2]; Fungal protein kinase [PF17667.3, score=20.2]; Phosphotransferase enzyme family [PF01636.25, score=20.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.8]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=19.0]; Haspin like kinase domain [PF12330.10, score=18.5]} {Human: ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [RH, Score=390, Expect=8e-133]} {Mouse: ENSMUSG00000025537, Phkg1, phosphorylase kinase gamma 1, [RH, Score=384, Expect=2e-130]; ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=370, Expect=5e-125]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [RH, Score=395, Expect=3e-135]} {Celegans: WBGene00021753, Y50D7A.3, [RH, Score=314, Expect=3e-102]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=201, Expect=8e-59]} {RNA1509_38006} {RNA1310_13257.1} {RNA815_5265.1}
6.	MligTC455_39728	8	0.17	Mlig455_066150	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_066150 {REF} {Length: 561} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_102766} {RNA815_55083}
7.	MligTC455_04859	11	0.22	Mlig455_024950	Neo: - Age: - Region-enriched R4: 3.504/0.04750		0.963	-	-	-	-	0.963	-	Mlig455_024950 {REF} {Length: 3538} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=44.0]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [RH, Score=124, Expect=5e-31]} {RNA1509_18844} {RNA1310_42298.1} {RNA815_43979}
8.	MligTC455_30814	51	1.07	Mlig455_003105, Mlig455_003106	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_003105 {REF} {Length: 1284} {TRANSSPLICED} {RNA1509_58333} {RNA1310_55385.1} {RNA815_38567} Mlig455_003106 {REF} {Length: 2903} {RNA1509_25856} {RNA1310_27220} {RNA815_18032}
9.	MligTC455_30815	30	0.62	Mlig455_062786	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_062786 {REF} {Length: 2818} {RNA1509_25856} {RNA1310_18000.1} {RNA815_10283}
10.	MligTC455_56539	5	0.1	Mlig455_007812	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_007812 {REF} {Length: 211} {NoTransDecoderORF}
11.	MligTC455_31812	19	0.4	Mlig455_026262	Neo: - Age: -	TRIM3	0.956	-	-	-	-	0.956	-	Mlig455_026262 {REF} {Length: 2016} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=35.6]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=65.1, Expect=2e-10]; ENSG00000109654, TRIM2, tripartite motif containing 2, [Score=65.1, Expect=2e-10]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=65.1, Expect=1e-10]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=65.1, Expect=1e-10]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=53.9, Expect=2e-07]} {RNA1509_15622} {RNA1310_14145.1} {RNA815_3900.1}

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