TomoSeq data search

Data search

Results for MligTC455_29180

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29180

18

0.38

Mlig455_048888

Neo: -

Age: Up-Up-Down

PHKG1

Mlig455_048888 {REF} {Length: 5051} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.3]; Kinase-like [PF14531.8, score=33.2]; Ternary complex associated domain 9 [PF19974.1, score=24.2]; PhoP regulatory network protein YrbL [PF10707.11, score=22.2]; Fungal protein kinase [PF17667.3, score=20.2]; Phosphotransferase enzyme family [PF01636.25, score=20.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.8]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=19.0]; Haspin like kinase domain [PF12330.10, score=18.5]} {Human: ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [RH, Score=390, Expect=8e-133]} {Mouse: ENSMUSG00000025537, Phkg1, phosphorylase kinase gamma 1, [RH, Score=384, Expect=2e-130]; ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=370, Expect=5e-125]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [RH, Score=395, Expect=3e-135]} {Celegans: WBGene00021753, Y50D7A.3, [RH, Score=314, Expect=3e-102]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=201, Expect=8e-59]} {RNA1509_38006} {RNA1310_13257.1} {RNA815_5265.1}

Cumulative graph for MligTC455_29180

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.214	0.661	1.00000	1.00000
RegionR2	1.918	0.661	0.99994	1.00000
RegionR3	-0.115	0.661	0.99994	1.00000
RegionR4	-2.295	0.661	0.99981	1.00000
RegionR5	-1.162	0.661	0.99992	1.00000
RegionR6	-0.56	0.661	0.99996	1.00000
RegionR7	1.198	0.661	0.99998	1.00000
RegionR8	2.23	0.661	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.095	0.661	1.00000	1.00000
RegenerationR2	1.446	0.661	0.99995	1.00000
RegenerationR3	2.414	0.661	1.00000	1.00000
RegenerationR4	0.895	0.661	1.00000	1.00000
RegenerationR5	-0.427	0.661	0.99965	1.00000
RegenerationR6	2.738	0.661	1.00000	1.00000
RegenerationBL	-1.947	0.661	1.00000	1.00000
RegenerationTP	-1.461	0.661	0.99993	1.00000

Genes with expression patterns similar to MligTC455_29180

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29180	18	0.38	Mlig455_048888	Neo: - Age: Up-Up-Down	PHKG1	1	-	-	-	-	1.000	-	Mlig455_048888 {REF} {Length: 5051} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.3]; Kinase-like [PF14531.8, score=33.2]; Ternary complex associated domain 9 [PF19974.1, score=24.2]; PhoP regulatory network protein YrbL [PF10707.11, score=22.2]; Fungal protein kinase [PF17667.3, score=20.2]; Phosphotransferase enzyme family [PF01636.25, score=20.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=19.8]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=19.0]; Haspin like kinase domain [PF12330.10, score=18.5]} {Human: ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [RH, Score=390, Expect=8e-133]} {Mouse: ENSMUSG00000025537, Phkg1, phosphorylase kinase gamma 1, [RH, Score=384, Expect=2e-130]; ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=370, Expect=5e-125]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [RH, Score=395, Expect=3e-135]} {Celegans: WBGene00021753, Y50D7A.3, [RH, Score=314, Expect=3e-102]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=201, Expect=8e-59]} {RNA1509_38006} {RNA1310_13257.1} {RNA815_5265.1}
2.	MligTC455_11510	13	0.27	Mlig455_028783	Neo: Germline Age: Down-Down-Down, logFC(26M/2M)=-1.963		0.994	-	-	-	-	0.994	-	Mlig455_028783 {REF} {Length: 855} {Pfam: CDC45-like protein [PF02724.16, score=19.2]} {RNA1310_71340}
3.	MligTC455_10298	10	0.21	Mlig455_023027	Neo: - Age: -	ANGPTL7	0.992	-	-	-	-	0.992	-	Mlig455_023027 {REF} {Length: 1281} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.3]; PAN domain [PF00024.28, score=20.0]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=106, Expect=4e-26]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=103, Expect=1e-24]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=101, Expect=2e-24]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=98.2, Expect=1e-22]; ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=97.1, Expect=2e-22]} {Dmel: FBgn0034160, CG5550, [Score=95.9, Expect=2e-23]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=104, Expect=3e-25]} {RNA1310_39646} {RNA815_17918.1}
4.	MligTC455_04981	7	0.14	Mlig455_017960	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.185		0.99	-	-	-	-	0.990	-	Mlig455_017960 {REF} {Length: 1150} {RNA1509_49386} {RNA1310_62890, RNA1509_49386} {RNA1509_49386, RNA815_18096}
5.	MligTC455_04859	11	0.22	Mlig455_024950	Neo: - Age: - Region-enriched R4: 3.504/0.04750		0.989	-	-	-	-	0.989	-	Mlig455_024950 {REF} {Length: 3538} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=44.0]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [RH, Score=124, Expect=5e-31]} {RNA1509_18844} {RNA1310_42298.1} {RNA815_43979}
6.	MligTC455_33363	8	0.16	Mlig455_063301	Neo: - Age: Up-Down-Down	ITPR1	0.976	-	-	-	-	0.976	-	Mlig455_063301 {REF} {Length: 5739} {Pfam: RIH domain [PF01365.23, score=103.3]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=76.2]; MIR domain [PF02815.21, score=59.9]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=207, Expect=8e-53]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=203, Expect=1e-51]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=200, Expect=8e-51]} {Mouse: ENSMUSG00000030287, Itpr2, inositol 1,4,5-triphosphate receptor 2, [Score=209, Expect=1e-53]; ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=208, Expect=3e-53]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=134, Expect=5e-31]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=170, Expect=3e-42]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1662, Expect=0.0]} {RNA1509_2159} {RNA1310_132.2} {RNA815_101}
7.	MligTC455_12560	18	0.37	Mlig455_059693	Neo: - Age: -		0.974	-	-	-	-	0.974	-	Mlig455_059693 {REF} {Length: 1160} {RNA1310_113662} {RNA815_53854}
8.	MligTC455_12999	17	0.34	Mlig455_056142	Neo: - Age: logFC(26M/2M)=-0.895		0.971	-	-	-	-	0.971	-	Mlig455_056142 {REF} {Length: 842} {NoTransDecoderORF} {RNA1509_2486} {RNA1310_82742} {RNA815_5954.1}
9.	MligTC455_18001	30	0.62	Mlig455_049734	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_049734 {REF} {Length: 684} {NoTransDecoderORF}
10.	MligTC455_35933	19	0.4	Mlig455_033271	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_033271 {REF} {Length: 1256} {RNA1310_22041} {RNA815_26444}
11.	MligTC455_10289	10	0.21	Mlig455_012272	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.129		0.961	-	-	-	-	0.961	-	Mlig455_012272 {REF} {Length: 2644} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=23.6]} {RNA1310_76907} {RNA815_46853}
12.	MligTC455_16163	16	0.32	Mlig455_020058	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_020058 {REF} {Length: 1273}
13.	MligTC455_17229	9	0.18	Mlig455_035586	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_035586 {REF} {Length: 1135} {NoTransDecoderORF} {RNA1509_13138} {RNA1310_14959.1} {RNA815_9852.1}
14.	MligTC455_50446	34	0.7	Mlig455_007560	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_007560 {REF} {Length: 764} {NoTransDecoderORF} {RNA1310_22923} {RNA815_27594}
15.	MligTC455_08937	6	0.13	Mlig455_018146	Neo: - Age: Up-Down-Down	GALR2	0.95	-	-	-	-	0.950	-	Mlig455_018146 {REF} {Length: 2783} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=147.1]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.7]; Serpentine type 7TM GPCR chemoreceptor Sru [PF10322.11, score=20.0]} {Human: ENSG00000182687, GALR2, galanin receptor 2, [Score=144, Expect=6e-39]} {Mouse: ENSMUSG00000020793, Galr2, galanin receptor 2, [Score=136, Expect=4e-36]} {Dmel: FBgn0036789, AstC-R2, Allatostatin C receptor 2, [Score=107, Expect=3e-25]} {Celegans: WBGene00013974, npr-9, Galanin-like G-protein coupled receptor npr-9, [Score=98.6, Expect=2e-22]} {Smed: dd_Smed_v6_15151_0_1, dd_Smed_v6_15151_0_1, [RH, Score=244, Expect=8e-77]} {RNA1310_87003} {RNA815_54694}

Berezikov Lab - 2020-2021 © ERIBA