TomoSeq data search

Data search

Results for MligTC455_18016

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18016	454	9.45	Mlig455_039735, Mlig455_060893	Neo: - Age: -		Mlig455_039735 {REF} {Length: 1399} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1} Mlig455_060893 {REF} {Length: 1084} {TRANSSPLICED} {RNA1509_35561} {RNA1310_72970.1} {RNA815_18757.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_18016

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-7.09	3.624	0.04893	0.52660
RegionR2	1.932	3.624	0.04814	0.26059
RegionR3	0.999	3.624	0.28635	0.82809
RegionR4	0.389	3.624	0.67605	0.97121
RegionR5	-0.042	3.624	0.86547	1.00000
RegionR6	0.924	3.624	0.34188	0.92878
RegionR7	1.664	3.624	0.07112	0.51299
RegionR8	1.225	3.624	0.28821	0.91559

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.396	3.624	0.99996	1.00000
RegenerationR2	-1.932	3.624	0.00659	0.12936
RegenerationR3	-0.081	3.624	0.91230	1.00000
RegenerationR4	-0.022	3.624	0.97496	1.00000
RegenerationR5	0.501	3.624	0.48184	0.84718
RegenerationR6	-0.444	3.624	0.58038	0.85778
RegenerationBL	-0.71	3.624	0.38110	0.74962
RegenerationTP	-0.075	3.624	0.92202	1.00000

Genes with expression patterns similar to MligTC455_18016

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18016	454	9.45	Mlig455_039735, Mlig455_060893	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_039735 {REF} {Length: 1399} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1} Mlig455_060893 {REF} {Length: 1084} {TRANSSPLICED} {RNA1509_35561} {RNA1310_72970.1} {RNA815_18757.1}
2.	MligTC455_04187	261	5.45	Mlig455_041536	Neo: - Age: -	SLIT2	0.978	-	-	-	-	-	0.978	Mlig455_041536 {REF} {Length: 3233} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18016

454

9.45

Mlig455_039735, Mlig455_060893

Neo: -

Age: -

1.000

Mlig455_039735 {REF} {Length: 1399} {RNA1509_35561} {RNA1310_52621} {RNA815_21429.1}

Mlig455_060893 {REF} {Length: 1084} {TRANSSPLICED} {RNA1509_35561} {RNA1310_72970.1} {RNA815_18757.1}

MligTC455_04187

261

5.45

Mlig455_041536

Neo: -

Age: -

SLIT2

0.978

Mlig455_041536 {REF} {Length: 3233} {Pfam: EGF-like domain [PF00008.29, score=134.3]; Human growth factor-like EGF [PF12661.9, score=87.7]; Laminin G domain [PF00054.25, score=62.9]; Laminin G domain [PF02210.26, score=59.4]; Leucine rich repeat [PF13855.8, score=46.5]; EGF-like domain [PF07974.15, score=37.6]; EGF domain [PF12947.9, score=29.8]; Calcium-binding EGF domain [PF07645.17, score=25.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.3]} {Human: ENSG00000145147, SLIT2, slit guidance ligand 2, [Score=399, Expect=2e-122]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=388, Expect=1e-118]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=373, Expect=4e-113]} {Dmel: FBgn0264089, sli, slit, [Score=480, Expect=8e-153]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=413, Expect=2e-128]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=482, Expect=2e-153]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}