Data search


search
Exact
Search

Results for MligTC455_18090

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18090 507 10.55 Mlig455_033017, Mlig455_041837, Mlig455_044075

Neo: -

Age: -

Mlig455_033017 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27245, RNA1509_27830} {RNA1310_8544.1, RNA1509_27245, RNA1509_27830} {RNA1509_27245, RNA1509_27830, RNA815_7930.1}

Mlig455_041837 {REF} {Length: 1787} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=21.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}

Mlig455_044075 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}

Cumulative graph for MligTC455_18090

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.126 3.856 0.46930 1.00000
RegionR2 0.111 3.856 0.86771 1.00000
RegionR3 0.461 3.856 0.34263 0.87851
RegionR4 0.367 3.856 0.54930 0.87028
RegionR5 0.228 3.856 0.61443 0.97149
RegionR6 0.638 3.856 0.20352 0.77738
RegionR7 0.361 3.856 0.55185 1.00000
RegionR8 -1.04 3.856 0.22173 0.82928

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.833 3.856 0.10795 0.83072
RegenerationR2 -0.723 3.856 0.21116 0.65850
RegenerationR3 -0.208 3.856 0.71806 0.95404
RegenerationR4 -0.003 3.856 0.99322 1.00000
RegenerationR5 0.115 3.856 0.82790 0.99697
RegenerationR6 -0.851 3.856 0.15397 0.48000
RegenerationBL 0.051 3.856 0.94250 1.00000
RegenerationTP -1.167 3.856 0.19681 0.63648


Genes with expression patterns similar to MligTC455_18090

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18090 507 10.55 Mlig455_033017, Mlig455_041837, Mlig455_044075

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_033017 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27245, RNA1509_27830} {RNA1310_8544.1, RNA1509_27245, RNA1509_27830} {RNA1509_27245, RNA1509_27830, RNA815_7930.1}

Mlig455_041837 {REF} {Length: 1787} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=21.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}

Mlig455_044075 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}
2. MligTC455_35362 1327 27.64 Mlig455_008538

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.718

Region-enriched R4: 1.957/0.01784
Region-enriched R5: 1.459/0.03051

HDHD5 0.972 - - - - - 0.972 Mlig455_008538 {REF} {Length: 1726} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=49.6]; HAD-hyrolase-like [PF13242.8, score=33.9]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [Score=285, Expect=8e-92]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [Score=271, Expect=1e-86]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=206, Expect=6e-62]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=430, Expect=3e-149]} {RNA1509_17924, RNA1509_51751} {RNA1310_18496, RNA1509_17924, RNA1509_51751} {RNA1509_17924, RNA1509_51751, RNA815_7610}
3. MligTC455_50158 531 11.07 Mlig455_032079

Neo: -

Age: Up-Down-Down

DHRS4 0.959 - - - - - 0.959 Mlig455_032079 {REF} {Length: 6289} {Pfam: AMP-binding enzyme [PF00501.30, score=257.3]; Male sterility protein [PF07993.14, score=180.5]; short chain dehydrogenase [PF00106.27, score=177.6]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=141.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=70.7]; Phosphopantetheine attachment site [PF00550.27, score=56.6]; KR domain [PF08659.12, score=45.1]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=42.2]; AMP-binding enzyme C-terminal domain [PF13193.8, score=37.1]; NAD(P)H-binding [PF13460.8, score=36.9]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.7]; RmlD substrate binding domain [PF04321.19, score=26.1]; Polysaccharide biosynthesis protein [PF02719.17, score=25.0]; NmrA-like family [PF05368.15, score=21.3]} {Human: ENSG00000284807, DHRS4, dehydrogenase/reductase 4, [Score=107, Expect=9e-25]; ENSG00000157326, DHRS4, dehydrogenase/reductase 4, [Score=107, Expect=9e-25]; ENSG00000278535, DHRS11, dehydrogenase/reductase 11, [Score=104, Expect=6e-24]; ENSG00000275397, DHRS11, dehydrogenase/reductase 11, [Score=104, Expect=6e-24]} {Mouse: ENSMUSG00000034449, Dhrs11, dehydrogenase/reductase (SDR family) member 11, [Score=103, Expect=7e-24]; ENSMUSG00000034528, Hsd17b13, hydroxysteroid (17-beta) dehydrogenase 13, [Score=99.4, Expect=4e-22]; ENSMUSG00000109482, Gm4756, predicted gene 4756, [Score=99.0, Expect=1e-21]; ENSMUSG00000022209, Dhrs2, dehydrogenase/reductase member 2, [Score=98.6, Expect=5e-22]; ENSMUSG00000027195, Hsd17b12, hydroxysteroid (17-beta) dehydrogenase 12, [Score=98.2, Expect=1e-21]} {Dmel: FBgn0000527, e, ebony, [RH, Score=184, Expect=2e-47]} {Celegans: WBGene00021646, Y47G6A.21, [Score=101, Expect=2e-23]} {Smed: dd_Smed_v6_7198_0_1, dd_Smed_v6_7198_0_1, [RH, Score=1223, Expect=0.0]} {RNA1509_4155, RNA1509_54472} {RNA1310_1184, RNA1509_54472} {RNA1509_54472, RNA815_1128}
4. MligTC455_46840 81 1.69 Mlig455_015487

Neo: -

Age: logFC(26M/2M)=0.334

LRG1 0.955 - - - - - 0.955 Mlig455_015487 {REF} {Length: 3538} {Pfam: Leucine rich repeat [PF13855.8, score=38.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=36.4]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=50.1, Expect=6e-06]; ENSG00000165383, LRRC18, leucine rich repeat containing 18, [Score=49.3, Expect=7e-06]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=53.9, Expect=4e-07]; ENSMUSG00000041673, Lrrc18, leucine rich repeat containing 18, [Score=53.1, Expect=4e-07]} {Dmel: FBgn0010452, trn, tartan, [Score=51.2, Expect=2e-06]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=52.8, Expect=7e-07]} {RNA1509_37547} {RNA1310_14038} {RNA815_17015}
5. MligTC455_50159 509 10.61 Mlig455_070281

Neo: -

Age: -

DHRS11 0.955 - - - - - 0.955 Mlig455_070281 {REF} {Length: 5640} {Pfam: AMP-binding enzyme [PF00501.30, score=260.9]; Male sterility protein [PF07993.14, score=180.4]; short chain dehydrogenase [PF00106.27, score=174.3]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=142.0]; NAD dependent epimerase/dehydratase family [PF01370.23, score=69.4]; Phosphopantetheine attachment site [PF00550.27, score=56.5]; KR domain [PF08659.12, score=46.7]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=42.6]; AMP-binding enzyme C-terminal domain [PF13193.8, score=36.7]; NAD(P)H-binding [PF13460.8, score=30.9]; GDP-mannose 4,6 dehydratase [PF16363.7, score=29.5]; RmlD substrate binding domain [PF04321.19, score=25.9]; Polysaccharide biosynthesis protein [PF02719.17, score=25.8]; NmrA-like family [PF05368.15, score=22.0]} {Human: ENSG00000278535, DHRS11, dehydrogenase/reductase 11, [Score=102, Expect=3e-23]; ENSG00000284807, DHRS4, dehydrogenase/reductase 4, [Score=102, Expect=4e-23]; ENSG00000275397, DHRS11, dehydrogenase/reductase 11, [Score=102, Expect=3e-23]; ENSG00000157326, DHRS4, dehydrogenase/reductase 4, [Score=102, Expect=4e-23]; ENSG00000145439, CBR4, carbonyl reductase 4, [Score=99.4, Expect=2e-22]} {Mouse: ENSMUSG00000034449, Dhrs11, dehydrogenase/reductase (SDR family) member 11, [Score=100, Expect=6e-23]; ENSMUSG00000034528, Hsd17b13, hydroxysteroid (17-beta) dehydrogenase 13, [Score=98.6, Expect=9e-22]; ENSMUSG00000029311, Hsd17b11, hydroxysteroid (17-beta) dehydrogenase 11, [Score=97.4, Expect=5e-22]; ENSMUSG00000109482, Gm4756, predicted gene 4756, [Score=97.1, Expect=5e-21]; ENSMUSG00000027195, Hsd17b12, hydroxysteroid (17-beta) dehydrogenase 12, [Score=95.9, Expect=9e-21]} {Dmel: FBgn0000527, e, ebony, [RH, Score=184, Expect=2e-47]} {Celegans: WBGene00008375, D1054.8, [Score=100, Expect=6e-23]} {Smed: dd_Smed_v6_7198_0_1, dd_Smed_v6_7198_0_1, [RH, Score=1224, Expect=0.0]} {RNA1509_4155, RNA1509_43840} {RNA1310_1184, RNA1509_43840} {RNA1509_43840, RNA815_1128}
6. MligTC455_31505 1235 25.72 Mlig455_017485, Mlig455_059757

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.382/0.00001

MTHFD1 0.953 - - - - - 0.953

Mlig455_017485 {REF} {Length: 444} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.9, Expect=3e-07]} {RNA815_63158}

Mlig455_059757 {REF} {Length: 2319} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=784.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=108.8]; FAD dependent oxidoreductase [PF01266.26, score=105.3]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1026, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1024, Expect=0.0]} {RNA1509_17611, RNA1509_20397} {RNA1310_1725.2, RNA1509_20397} {RNA1509_20397, RNA815_946}
7. MligTC455_33325 675 14.07 Mlig455_070522

Neo: -

Age: logFC(26M/2M)=4.497

Region-enriched R4: 1.992/0.01215

STS 0.952 - - - - - 0.952 Mlig455_070522 {REF} {Length: 2225} {TRANSSPLICED} {Pfam: Sulfatase [PF00884.25, score=269.5]; C-terminal region of aryl-sulfatase [PF14707.8, score=41.1]; Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=36.1]} {Human: ENSG00000101846, STS, steroid sulfatase, [Score=398, Expect=1e-132]} {Mouse: ENSMUSG00000020604, Arsg, arylsulfatase G, [RH, Score=206, Expect=1e-59]} {Dmel: FBgn0036765, CG7408, [RH, Score=143, Expect=1e-36]} {Celegans: WBGene00006309, sul-2, SULfatase domain protein, [RH, Score=151, Expect=3e-40]} {RNA1509_5297} {RNA1310_7885.1} {RNA815_3164.1}
8. MligTC455_31504 1242 25.88 Mlig455_054990

Neo: -

Age: -

Region-enriched R5: 1.408/0.00000

MTHFD1 0.951 - - - - - 0.951 Mlig455_054990 {REF} {Length: 5294} {TRANSSPLICED} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=784.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=108.8]; FAD dependent oxidoreductase [PF01266.26, score=105.3]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1026, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1024, Expect=0.0]} {RNA1509_1569} {RNA1310_1725.1} {RNA815_946}
9. MligTC455_35218 678 14.12 Mlig455_014318

Neo: -

Age: Down-Up-Up

0.951 - - - - - 0.951 Mlig455_014318 {REF} {Length: 1896} {TRANSSPLICED} {Pfam: Transferase family [PF02458.17, score=159.5]} {RNA1509_21563, RNA1509_4768} {RNA1310_7742.1, RNA1509_21563, RNA1509_4768} {RNA1509_21563, RNA1509_4768, RNA815_6411}
10. MligTC455_35905 4161 86.69 Mlig455_035334

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.493

ATP6V1A 0.95 - - - - - 0.950 Mlig455_035334 {REF} {Length: 3600} {TRANSSPLICED} {Pfam: ATP synthase alpha/beta family, nucleotide-binding domain [PF00006.27, score=353.9]; ATPsynthase alpha/beta subunit N-term extension [PF16886.7, score=141.5]; ATP synthase alpha/beta family, beta-barrel domain [PF02874.25, score=47.5]} {Human: ENSG00000114573, ATP6V1A, ATPase H+ transporting V1 subunit A, [RH, Score=999, Expect=0.0]} {Mouse: ENSMUSG00000052459, Atp6v1a, ATPase, H+ transporting, lysosomal V1 subunit A, [RH, Score=997, Expect=0.0]} {Dmel: FBgn0263598, Vha68-2, Vacuolar H[+] ATPase 68 kDa subunit 2, [RH, Score=1001, Expect=0.0]} {Celegans: WBGene00013025, vha-13, V-type proton ATPase catalytic subunit A, [RH, Score=963, Expect=0.0]} {Smed: dd_Smed_v6_959_0_1, dd_Smed_v6_959_0_1, [RH, Score=985, Expect=0.0]} {RNA1509_1406} {RNA1310_8083.1} {RNA815_2893}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA