M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_31505

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31505 1235 25.72 Mlig455_017485, Mlig455_059757

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.382/0.00001

 MTHFD1

Mlig455_017485 {REF} {Length: 444} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.9, Expect=3e-07]} {RNA815_63158}

Mlig455_059757 {REF} {Length: 2319} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=784.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=108.8]; FAD dependent oxidoreductase [PF01266.26, score=105.3]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1026, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1024, Expect=0.0]} {RNA1509_17611, RNA1509_20397} {RNA1310_1725.2, RNA1509_20397} {RNA1509_20397, RNA815_946}

Cumulative graph for MligTC455_31505

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.078 4.895 0.92762 1.00000
RegionR2 -0.627 4.895 0.12147 0.43134
RegionR3 0.726 4.895 0.01421 0.19064
RegionR4 0.845 4.895 0.01223 0.07094
RegionR5 1.382 4.895 0.00000 0.00001
RegionR6 0.812 4.895 0.00720 0.13706
RegionR7 -1.453 4.895 0.00291 0.07530
RegionR8 -1.607 4.895 0.00750 0.16043

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.687 4.895 0.24113 0.96582
RegenerationR2 0.057 4.895 0.87336 1.00000
RegenerationR3 0.193 4.895 0.55823 0.88771
RegenerationR4 0.384 4.895 0.25553 0.70359
RegenerationR5 0.128 4.895 0.66838 0.94029
RegenerationR6 0.5 4.895 0.12726 0.43852
RegenerationBL 0.779 4.895 0.09700 0.36558
RegenerationTP 1.017 4.895 0.06558 0.41259


Genes with expression patterns similar to MligTC455_31505

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31505 1235 25.72 Mlig455_017485, Mlig455_059757

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.382/0.00001

 MTHFD1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_017485 {REF} {Length: 444} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=48.9, Expect=3e-07]} {RNA815_63158}

Mlig455_059757 {REF} {Length: 2319} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=784.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=108.8]; FAD dependent oxidoreductase [PF01266.26, score=105.3]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1026, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1024, Expect=0.0]} {RNA1509_17611, RNA1509_20397} {RNA1310_1725.2, RNA1509_20397} {RNA1509_20397, RNA815_946}
2. MligTC455_31504 1242 25.88 Mlig455_054990

Neo: -

Age: -

Region-enriched R5: 1.408/0.00000

 MTHFD1 5.992 1.000 1.000 0.997 0.998 0.999 0.998 Mlig455_054990 {REF} {Length: 5294} {TRANSSPLICED} {Pfam: Formate--tetrahydrofolate ligase [PF01268.21, score=784.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain [PF02882.21, score=216.4]; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain [PF00763.25, score=108.8]; FAD dependent oxidoreductase [PF01266.26, score=105.3]} {Human: ENSG00000100714, MTHFD1, methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000021048, Mthfd1, methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase, [RH, Score=1065, Expect=0.0]} {Dmel: FBgn0020385, pug, pugilist, [RH, Score=1026, Expect=0.0]} {Celegans: WBGene00019492, K07E3.4, [RH, Score=729, Expect=0.0]} {Smed: dd_Smed_v6_1858_0_1, dd_Smed_v6_1858_0_1, [RH, Score=1024, Expect=0.0]} {RNA1509_1569} {RNA1310_1725.1} {RNA815_946}
3. MligTC455_23529 2903 60.49 Mlig455_008938

Neo: -

Age: -

Region-enriched R4: 1.642/0.00496
Region-enriched R5: 1.368/0.00492

 PYCR2 2.751 - - - 0.963 0.902 0.886 Mlig455_008938 {REF} {Length: 2504} {TRANSSPLICED} {Pfam: Pyrroline-5-carboxylate reductase dimerisation [PF14748.8, score=123.3]; NADP oxidoreductase coenzyme F420-dependent [PF03807.19, score=81.5]; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus [PF01210.25, score=28.6]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=24.0]; Ornithine cyclodeaminase/mu-crystallin family [PF02423.17, score=21.2]} {Human: ENSG00000143811, PYCR2, pyrroline-5-carboxylate reductase 2, [Score=224, Expect=1e-71]; ENSG00000183010, PYCR1, pyrroline-5-carboxylate reductase 1, [Score=224, Expect=1e-71]} {Mouse: ENSMUSG00000025140, Pycr1, pyrroline-5-carboxylate reductase 1, [RH, Score=224, Expect=7e-72]} {Dmel: FBgn0038516, P5cr-2, Pyrroline-5-carboxylate reductase-like 2, [Score=209, Expect=9e-67]} {Celegans: WBGene00010924, M153.1, [Score=209, Expect=1e-66]} {Smed: dd_Smed_v6_3217_0_2, dd_Smed_v6_3217_0_2, [Score=158, Expect=5e-47]} {RNA1509_2371} {RNA1310_13686.1} {RNA815_4810}
4. MligTC455_53355 1190 24.78 Mlig455_033338, Mlig455_033357

Neo: -

Age: -

Region-enriched R4: 1.851/0.00149

 2.675 - - - 0.783 0.940 0.952

Mlig455_033338 {REF} {Length: 1291} {RNA1509_14712, RNA1509_46611} {RNA1310_36401.2, RNA1509_46611} {RNA1509_46611, RNA815_17710}

Mlig455_033357 {REF} {Length: 973} {TRANSSPLICED} {RNA1509_14712} {RNA1310_36401.2} {RNA815_17710}
5. MligTC455_34038 7911 164.82 Mlig455_000054, Mlig455_063725

Neo: -

Age: Down-Down-Up

Region-enriched R6: 1.527/0.00058
Region-enriched R5: 1.047/0.01224

 RDX 2.625 - - - 0.798 0.950 0.877

Mlig455_000054 {REF} {Length: 2630} {TRANSSPLICED} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=125.9]; FERM C-terminal PH-like domain [PF09380.12, score=89.9]; FERM central domain [PF00373.20, score=82.0]; FERM N-terminal domain [PF09379.12, score=63.7]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=607, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=598, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=607, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=588, Expect=0.0]; ENSMUSG00000052397, Ezr, ezrin, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=588, Expect=0.0]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_375} {RNA1310_7432.1} {RNA815_2296.1}

Mlig455_063725 {REF} {Length: 2614} {TRANSSPLICED} {Pfam: Ezrin/radixin/moesin family [PF00769.21, score=125.9]; FERM C-terminal PH-like domain [PF09380.12, score=89.9]; FERM central domain [PF00373.20, score=82.0]; FERM N-terminal domain [PF09379.12, score=63.7]} {Human: ENSG00000137710, RDX, radixin, [RH, Score=607, Expect=0.0]; ENSG00000092820, EZR, ezrin, [RH, Score=598, Expect=0.0]; ENSG00000147065, MSN, moesin, [RH, Score=592, Expect=0.0]} {Mouse: ENSMUSG00000032050, Rdx, radixin, [RH, Score=607, Expect=0.0]; ENSMUSG00000031207, Msn, moesin, [RH, Score=588, Expect=0.0]; ENSMUSG00000052397, Ezr, ezrin, [RH, Score=588, Expect=0.0]} {Dmel: FBgn0011661, Moe, Moesin, [RH, Score=588, Expect=0.0]} {Celegans: WBGene00001333, erm-1, ERM-1B; Ezrin/Radixin/Moesin, [RH, Score=580, Expect=0.0]} {Smed: dd_Smed_v6_8101_0_1, dd_Smed_v6_8101_0_1, [RH, Score=525, Expect=0.0]} {RNA1509_375} {RNA1310_7432.1} {RNA815_2296.1}
6. MligTC455_43535 5822 121.29 Mlig455_025114

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.664

Region-enriched R5: 1.507/0.00005
Region-enriched R4: 1.394/0.00195

 PAPSS2 2.58 - - 0.727 0.965 0.888 - Mlig455_025114 {REF} {Length: 4910} {Pfam: Adenylylsulphate kinase [PF01583.22, score=241.9]; ATP-sulfurylase [PF01747.19, score=233.5]; PUA-like domain [PF14306.8, score=132.0]; AAA domain [PF13671.8, score=32.0]; AAA domain [PF13238.8, score=21.3]} {Human: ENSG00000198682, PAPSS2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [RH, Score=810, Expect=0.0]; ENSG00000138801, PAPSS1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [RH, Score=803, Expect=0.0]} {Mouse: ENSMUSG00000024899, Papss2, 3'-phosphoadenosine 5'-phosphosulfate synthase 2, [RH, Score=807, Expect=0.0]; ENSMUSG00000028032, Papss1, 3'-phosphoadenosine 5'-phosphosulfate synthase 1, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0020389, Papss, PAPS synthetase, [RH, Score=777, Expect=0.0]} {Celegans: WBGene00004091, pps-1, 3'-Phosphoadenosine 5'-Phosphosulfate Synthetase, [RH, Score=709, Expect=0.0]} {Smed: dd_Smed_v6_2536_0_1, dd_Smed_v6_2536_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659} {RNA1310_5399, RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659} {RNA1509_11572, RNA1509_14633, RNA1509_31280, RNA1509_49104, RNA1509_59659, RNA815_4222.1}
7. MligTC455_22573 911 18.98 Mlig455_025361, Mlig455_025414

Neo: -

Age: -

Region-enriched R4: 1.522/0.00386

 CASK 2.555 - 0.857 - 0.735 - 0.963

Mlig455_025361 {REF} {Length: 4440} {Pfam: Protein kinase domain [PF00069.27, score=219.5]; Guanylate kinase [PF00625.23, score=204.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.6]; PDZ domain [PF00595.26, score=57.2]; L27 domain [PF02828.18, score=49.8]; Variant SH3 domain [PF07653.19, score=27.1]; SH3 domain [PF00018.30, score=22.2]; PDZ domain [PF17820.3, score=21.3]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [RH, Score=1127, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [RH, Score=1127, Expect=0.0]} {Dmel: FBgn0013759, CASK, [RH, Score=998, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=781, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_1, dd_Smed_v6_7723_0_1, [Score=1216, Expect=0.0]} {RNA1509_16531} {RNA1310_3775.3} {RNA815_11719.1}

Mlig455_025414 {REF} {Length: 4564} {Pfam: Guanylate kinase [PF00625.23, score=203.9]; PDZ domain [PF00595.26, score=57.6]; L27 domain [PF02828.18, score=33.4]; Variant SH3 domain [PF07653.19, score=26.9]; SH3 domain [PF00018.30, score=22.0]; PDZ domain [PF17820.3, score=21.2]} {Human: ENSG00000147044, CASK, calcium/calmodulin dependent serine protein kinase, [Score=619, Expect=0.0]} {Mouse: ENSMUSG00000031012, Cask, calcium/calmodulin-dependent serine protein kinase (MAGUK family), [Score=619, Expect=0.0]} {Dmel: FBgn0013759, CASK, [Score=616, Expect=0.0]} {Celegans: WBGene00002991, lin-2, [RH, Score=543, Expect=0.0]} {Smed: dd_Smed_v6_7723_0_4, dd_Smed_v6_7723_0_4, [Score=733, Expect=0.0]} {RNA1509_22896} {RNA1310_3775.1} {RNA815_32232}
8. MligTC455_51037 3327 69.32 Mlig455_003845

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.213

 MAT2B 2.527 - - - 0.744 0.823 0.960 Mlig455_003845 {REF} {Length: 1361} {TRANSSPLICED} {Pfam: RmlD substrate binding domain [PF04321.19, score=189.1]; NAD dependent epimerase/dehydratase family [PF01370.23, score=69.3]; GDP-mannose 4,6 dehydratase [PF16363.7, score=35.7]; Polysaccharide biosynthesis protein [PF02719.17, score=33.0]; Male sterility protein [PF07993.14, score=29.9]} {Human: ENSG00000038274, MAT2B, methionine adenosyltransferase 2B, [RH, Score=239, Expect=4e-77]} {Mouse: ENSMUSG00000042032, Mat2b, methionine adenosyltransferase II, beta, [RH, Score=247, Expect=2e-80]} {Smed: dd_Smed_v6_4260_0_1, dd_Smed_v6_4260_0_1, [RH, Score=248, Expect=4e-81]} {RNA1509_1125} {RNA1310_6401} {RNA815_10189}
9. MligTC455_43797 2681 55.85 Mlig455_051343

Neo: -

Age: logFC(26M/2M)=0.181

Region-enriched R5: 1.067/0.00046

 SHMT2 2.482 - - - 0.799 0.963 0.720 Mlig455_051343 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Serine hydroxymethyltransferase [PF00464.21, score=614.7]} {Human: ENSG00000182199, SHMT2, serine hydroxymethyltransferase 2, [RH, Score=653, Expect=0.0]} {Mouse: ENSMUSG00000025403, Shmt2, serine hydroxymethyltransferase 2 (mitochondrial), [RH, Score=657, Expect=0.0]} {Dmel: FBgn0029823, Shmt, Serine hydroxymethyl transferase, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00003214, mel-32, Serine hydroxymethyltransferase, [RH, Score=567, Expect=0.0]} {Smed: dd_Smed_v6_7793_0_1, dd_Smed_v6_7793_0_1, [RH, Score=638, Expect=0.0]} {RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642} {RNA1310_15013, RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642} {RNA1509_15664, RNA1509_23750, RNA1509_31482, RNA1509_4642, RNA815_5372}
10. MligTC455_36144 1899 39.57 Mlig455_029382

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.364

Region-enriched R5: 1.838/0.00000
Region-enriched R4: 1.288/0.00565

 KPNA2 1.862 - - - 0.967 0.895 - Mlig455_029382 {REF} {Length: 2476} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=191.5]; Importin beta binding domain [PF01749.22, score=66.2]; HEAT-like repeat [PF13513.8, score=63.2]; Atypical Arm repeat [PF16186.7, score=62.2]; HEAT repeats [PF13646.8, score=51.2]; HEAT repeat [PF02985.24, score=34.0]} {Human: ENSG00000182481, KPNA2, karyopherin subunit alpha 2, [Score=458, Expect=4e-156]} {Mouse: ENSMUSG00000018362, Kpna2, karyopherin (importin) alpha 2, [Score=451, Expect=2e-153]; ENSMUSG00000066878, Gm10184, predicted pseudogene 10184, [Score=451, Expect=2e-153]; ENSMUSG00000027782, Kpna4, karyopherin (importin) alpha 4, [Score=431, Expect=1e-145]} {Dmel: FBgn0267727, Pen, Pendulin, [RH, Score=397, Expect=2e-132]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=376, Expect=1e-124]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=419, Expect=2e-141]} {RNA1509_1276} {RNA1310_8995.1} {RNA815_2897}
11. MligTC455_49295 3159 65.82 Mlig455_031008

Neo: -

Age: -

Region-enriched R3: 1.314/0.00141
Region-enriched R6: 1.121/0.02181

 SERPINB1 1.822 - - - - 0.953 0.869 Mlig455_031008 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: Serpin (serine protease inhibitor) [PF00079.22, score=370.9]} {Human: ENSG00000021355, SERPINB1, serpin family B member 1, [RH, Score=248, Expect=8e-79]; ENSG00000206072, SERPINB11, serpin family B member 11 (gene/pseudogene), [RH, Score=238, Expect=1e-74]} {Mouse: ENSMUSG00000052180, Serpinb6c, serine (or cysteine) peptidase inhibitor, clade B, member 6c, [RH, Score=256, Expect=3e-82]; ENSMUSG00000044734, Serpinb1a, serine (or cysteine) peptidase inhibitor, clade B, member 1a, [RH, Score=254, Expect=1e-81]; ENSMUSG00000047889, Serpinb6d, serine (or cysteine) peptidase inhibitor, clade B, member 6d, [RH, Score=246, Expect=3e-78]} {Dmel: FBgn0028983, Spn55B, Serpin 55B, [RH, Score=195, Expect=8e-59]} {Celegans: WBGene00005648, srp-7, SeRPin; Serine or cysteine protease inhibitor, [RH, Score=186, Expect=2e-55]} {Smed: dd_Smed_v6_3824_0_1, dd_Smed_v6_3824_0_1, [RH, Score=241, Expect=1e-76]} {RNA1509_14486, RNA1509_44242} {RNA1310_18852, RNA1509_44242} {RNA1509_44242, RNA815_2173}
12. MligTC455_48615 3747 78.07 Mlig455_018900, Mlig455_064933

Neo: -

Age: Down-Down-Up

Region-enriched R3: 1.362/0.00080

 ACAA2 1.78 - - - 0.823 - 0.957

Mlig455_018900 {REF} {Length: 1899} {TRANSSPLICED} {Pfam: Thiolase, N-terminal domain [PF00108.25, score=279.8]; Thiolase, C-terminal domain [PF02803.20, score=155.7]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=20.1]} {Human: ENSG00000167315, ACAA2, acetyl-CoA acyltransferase 2, [RH, Score=495, Expect=2e-175]} {Mouse: ENSMUSG00000036880, Acaa2, acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase), [RH, Score=495, Expect=2e-175]} {Dmel: FBgn0040064, yip2, yippee interacting protein 2, [RH, Score=436, Expect=2e-152]} {Celegans: WBGene00009952, acaa-2, ACetyl-CoA Acyltransferase 2 homolog, [RH, Score=456, Expect=1e-160]} {Smed: dd_Smed_v6_1411_0_1, dd_Smed_v6_1411_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_2553} {RNA1310_14783, RNA1509_2553} {RNA1509_2553, RNA815_9850}

Mlig455_064933 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: Thiolase, N-terminal domain [PF00108.25, score=279.8]; Thiolase, C-terminal domain [PF02803.20, score=155.7]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=20.1]} {Human: ENSG00000167315, ACAA2, acetyl-CoA acyltransferase 2, [RH, Score=495, Expect=2e-175]} {Mouse: ENSMUSG00000036880, Acaa2, acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase), [RH, Score=495, Expect=2e-175]} {Dmel: FBgn0040064, yip2, yippee interacting protein 2, [RH, Score=436, Expect=2e-152]} {Celegans: WBGene00009952, acaa-2, ACetyl-CoA Acyltransferase 2 homolog, [RH, Score=456, Expect=1e-160]} {Smed: dd_Smed_v6_1411_0_1, dd_Smed_v6_1411_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_22057, RNA1509_2553, RNA1509_30195, RNA1509_36053, RNA1509_7180} {RNA1310_14783, RNA1509_22057, RNA1509_30195, RNA1509_36053, RNA1509_7180} {RNA1509_22057, RNA1509_30195, RNA1509_36053, RNA1509_7180, RNA815_9850}
13. MligTC455_32462 801 16.68 Mlig455_066536

Neo: -

Age: logFC(26M/2M)=0.522

Region-enriched R4: 1.701/0.00633
Region-enriched R5: 1.405/0.00472

 BLVRB 1.757 - - - 0.807 0.950 - Mlig455_066536 {REF} {Length: 1037} {TRANSSPLICED} {Pfam: NAD(P)H-binding [PF13460.8, score=121.3]; NmrA-like family [PF05368.15, score=41.7]} {Human: ENSG00000090013, BLVRB, biliverdin reductase B, [RH, Score=63.9, Expect=6e-12]} {Mouse: ENSMUSG00000040466, Blvrb, biliverdin reductase B (flavin reductase (NADPH)), [RH, Score=63.5, Expect=6e-12]} {RNA1509_19997} {RNA1310_35613.1} {RNA815_16010.1}
14. MligTC455_33892 1719 35.82 Mlig455_017173

Neo: -

Age: logFC(26M/2M)=0.665

Region-enriched R5: 1.201/0.00598

 SHMT2 1.727 - - - 0.765 0.962 - Mlig455_017173 {REF} {Length: 2241} {TRANSSPLICED} {Pfam: Serine hydroxymethyltransferase [PF00464.21, score=445.7]} {Human: ENSG00000182199, SHMT2, serine hydroxymethyltransferase 2, [Score=432, Expect=2e-148]} {Mouse: ENSMUSG00000025403, Shmt2, serine hydroxymethyltransferase 2 (mitochondrial), [Score=427, Expect=1e-146]} {Dmel: FBgn0029823, Shmt, Serine hydroxymethyl transferase, [Score=417, Expect=3e-143]} {Celegans: WBGene00003214, mel-32, Serine hydroxymethyltransferase, [Score=435, Expect=4e-150]} {Smed: dd_Smed_v6_2312_0_1, dd_Smed_v6_2312_0_1, [Score=425, Expect=1e-146]} {RNA1509_2637} {RNA1310_8717.1} {RNA815_3601}
15. MligTC455_54219 1004 20.92 Mlig455_056207

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.346

Regeneration-upregulated R6: 1.561

Regeneration-enriched R6: 1.561

 NUP93 1.713 - - - - 0.963 0.750 Mlig455_056207 {REF} {Length: 3132} {Pfam: Nup93/Nic96 [PF04097.16, score=370.6]} {Human: ENSG00000102900, NUP93, nucleoporin 93, [RH, Score=436, Expect=7e-140]} {Mouse: ENSMUSG00000032939, Nup93, nucleoporin 93, [RH, Score=440, Expect=1e-141]} {Dmel: FBgn0027537, Nup93-1, Nucleoporin 93kD-1, [RH, Score=295, Expect=4e-87]} {Smed: dd_Smed_v6_9207_0_1, dd_Smed_v6_9207_0_1, [RH, Score=318, Expect=8e-96]} {RNA1509_8355} {RNA1310_4739, RNA1509_8355} {RNA1509_8355, RNA815_23464}
16. MligTC455_48968 2833 59.01 Mlig455_068344

Neo: -

Age: -

 1.677 - - - - 0.727 0.950 Mlig455_068344 {REF} {Length: 680} {TRANSSPLICED} {Pfam: Type III secretion system lipoprotein chaperone (YscW) [PF09619.12, score=24.2]} {RNA1509_52356} {RNA1310_19739.1} {RNA815_20380}
17. MligTC455_19942 770 16.04 Mlig455_045672

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.530/0.00045

Regeneration-upregulated BL: 2.332

Regeneration-enriched BL: 2.332

 RNPS1 1.666 0.709 - - - 0.957 - Mlig455_045672 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.9]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=88.2, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=103, Expect=1e-25]} {RNA1509_14792} {RNA1310_28374, RNA1509_14792} {RNA1509_14792, RNA815_13087}
18. MligTC455_30394 279 5.8 Mlig455_029592

Neo: -

Age: -

 ALDH18A1 0.97 - - - - 0.970 - Mlig455_029592 {REF} {Length: 2910} {TRANSSPLICED} {Pfam: Amino acid kinase family [PF00696.30, score=138.8]; Aldehyde dehydrogenase family [PF00171.24, score=56.3]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=813, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=808, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=915, Expect=0.0]} {RNA1509_1671, RNA1509_34684} {RNA1310_2413, RNA1509_34684} {RNA1509_34684, RNA815_1917}
19. MligTC455_30395 108 2.25 Mlig455_070650

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.875

 ALDH18A1 0.961 - - - - 0.961 - Mlig455_070650 {REF} {Length: 3857} {Pfam: Amino acid kinase family [PF00696.30, score=138.7]; Aldehyde dehydrogenase family [PF00171.24, score=57.0]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=815, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=811, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=916, Expect=0.0]} {RNA1509_1671} {RNA1310_2413} {RNA815_1917}
20. MligTC455_46522 5260 109.58 Mlig455_015803

Neo: -

Age: -

Region-enriched R6: 1.388/0.00900
Region-enriched R5: 1.193/0.00785

 SNRNP35 0.957 - - - 0.957 - - Mlig455_015803 {REF} {Length: 2705} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=65.0]} {Human: ENSG00000184209, SNRNP35, small nuclear ribonucleoprotein U11/U12 subunit 35, [RH, Score=112, Expect=2e-29]} {Mouse: ENSMUSG00000029402, Snrnp35, small nuclear ribonucleoprotein 35 (U11/U12), [RH, Score=112, Expect=7e-30]} {Dmel: FBgn0016978, snRNP-U1-70K, small ribonucleoprotein particle U1 subunit 70K, [Score=60.1, Expect=3e-10]} {Celegans: WBGene00004390, rnp-7, RNP (RRM RNA binding domain) containing, [Score=77.4, Expect=2e-16]} {Smed: dd_Smed_v6_9913_0_1, dd_Smed_v6_9913_0_1, [RH, Score=92.4, Expect=5e-23]} {RNA1509_21956, RNA1509_31946, RNA1509_33728} {RNA1310_19688, RNA1509_31946, RNA1509_33728} {RNA1509_31946, RNA1509_33728, RNA815_15791}
21. MligTC455_38689 1379 28.72 Mlig455_026080

Neo: Irradiation

Age: -

Region-enriched R5: 1.494/0.00002

 RREB1 0.954 - - - - 0.954 - Mlig455_026080 {REF} {Length: 5502} {Pfam: C2H2-type zinc finger [PF13894.8, score=56.7]; Zinc finger, C2H2 type [PF00096.28, score=31.4]; Zinc-finger double domain [PF13465.8, score=30.3]} {Human: ENSG00000124782, RREB1, ras responsive element binding protein 1, [RH, Score=101, Expect=6e-24]} {Mouse: ENSMUSG00000039087, Rreb1, ras responsive element binding protein 1, [RH, Score=99.0, Expect=3e-20]} {Dmel: FBgn0003053, peb, pebbled, [RH, Score=90.5, Expect=9e-18]} {Celegans: WBGene00018567, F47E1.3, [Score=69.3, Expect=1e-11]} {Smed: dd_Smed_v6_10103_0_1, dd_Smed_v6_10103_0_1, [RH, Score=125, Expect=1e-29]} {RNA1509_22185, RNA1509_25375} {RNA1310_1106.1, RNA1509_25375} {RNA1509_25375, RNA815_1479.1}
22. MligTC455_18090 507 10.55 Mlig455_033017, Mlig455_041837, Mlig455_044075

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_033017 {REF} {Length: 1833} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27245, RNA1509_27830} {RNA1310_8544.1, RNA1509_27245, RNA1509_27830} {RNA1509_27245, RNA1509_27830, RNA815_7930.1}

Mlig455_041837 {REF} {Length: 1787} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=21.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}

Mlig455_044075 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: Eukaryotic protein of unknown function (DUF829) [PF05705.16, score=63.0]} {RNA1509_27830} {RNA1310_8544.1} {RNA815_7930.1}
23. MligTC455_20964 298 6.21 Mlig455_000193

Neo: -

Age: -

 FDPS 0.95 - - - - 0.950 - Mlig455_000193 {REF} {Length: 2070} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=237.7]} {Human: ENSG00000160752, FDPS, farnesyl diphosphate synthase, [RH, Score=220, Expect=2e-68]} {Mouse: ENSMUSG00000059743, Fdps, farnesyl diphosphate synthetase, [RH, Score=223, Expect=5e-70]} {Dmel: FBgn0025373, Fpps, Farnesyl pyrophosphate synthase, [RH, Score=235, Expect=6e-74]} {Celegans: WBGene00011058, fdps-1, Farnesyl DiPhosphate Synthetase, [RH, Score=189, Expect=5e-57]} {Smed: dd_Smed_v6_13592_0_1, dd_Smed_v6_13592_0_1, [RH, Score=223, Expect=2e-70]} {RNA1509_46820} {RNA1310_13210} {RNA815_12356}
24. MligTC455_27061 3819 79.56 Mlig455_004699, Mlig455_004771, Mlig455_004859

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.994

Region-enriched R5: 1.934/0.03216

 ANK1 0.95 - - - 0.950 - -

Mlig455_004699 {REF} {Length: 3824} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=212.9]; Ankyrin repeats (many copies) [PF13637.8, score=175.6]; Ankyrin repeats (many copies) [PF13857.8, score=156.5]; Ankyrin repeat [PF00023.32, score=144.9]; Ankyrin repeat [PF13606.8, score=127.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=181, Expect=2e-47]; ENSG00000145362, ANK2, ankyrin 2, [Score=172, Expect=9e-45]; ENSG00000151150, ANK3, ankyrin 3, [Score=172, Expect=2e-44]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=173, Expect=2e-45]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=171, Expect=2e-44]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=169, Expect=6e-44]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=171, Expect=1e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=161, Expect=2e-41]} {Smed: dd_Smed_v6_2072_0_6, dd_Smed_v6_2072_0_6, [Score=153, Expect=7e-39]} {RNA1509_13499} {RNA1310_202} {RNA815_923}

Mlig455_004771 {REF} {Length: 5267} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=202.2]; Ankyrin repeats (many copies) [PF13857.8, score=138.4]; Ankyrin repeats (many copies) [PF13637.8, score=138.2]; Ankyrin repeat [PF00023.32, score=128.1]; Ankyrin repeat [PF13606.8, score=112.1]; Mab-21 protein [PF03281.16, score=28.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=161, Expect=8e-41]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=153, Expect=2e-38]} {Dmel: FBgn0031473, CG3104, [Score=153, Expect=3e-41]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=145, Expect=5e-36]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=139, Expect=3e-34]} {RNA1509_13499} {RNA1310_202, RNA1509_13499} {RNA1509_13499, RNA815_923}

Mlig455_004859 {REF} {Length: 4392} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.8]; Ankyrin repeats (many copies) [PF13637.8, score=168.0]; Ankyrin repeats (many copies) [PF13857.8, score=148.4]; Ankyrin repeat [PF00023.32, score=138.4]; Ankyrin repeat [PF13606.8, score=122.1]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=179, Expect=3e-45]; ENSG00000151150, ANK3, ankyrin 3, [Score=173, Expect=3e-43]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=173, Expect=2e-43]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=172, Expect=6e-43]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=165, Expect=5e-41]} {Dmel: FBgn0031473, CG3104, [Score=163, Expect=4e-44]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=162, Expect=2e-40]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=152, Expect=4e-37]} {RNA1509_13499} {RNA1310_202} {RNA815_923}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA