TomoSeq data search

Data search

Results for MligTC455_18113

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_18113	419	8.72	Mlig455_056777	Neo: - Age: -	FCN2	Mlig455_056777 {REF} {Length: 1935} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=150.8]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=113, Expect=1e-28]; ENSG00000085265, FCN1, ficolin 1, [Score=112, Expect=3e-28]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [Score=112, Expect=2e-27]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=111, Expect=4e-27]} {Mouse: ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=114, Expect=2e-28]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=110, Expect=1e-27]} {Dmel: FBgn0003326, sca, scabrous, [Score=108, Expect=3e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=4e-26]} {RNA1310_36897.1} {RNA815_29373}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18113

419

8.72

Mlig455_056777

Neo: -

Age: -

FCN2

Mlig455_056777 {REF} {Length: 1935} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=150.8]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=113, Expect=1e-28]; ENSG00000085265, FCN1, ficolin 1, [Score=112, Expect=3e-28]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [Score=112, Expect=2e-27]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=111, Expect=4e-27]} {Mouse: ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=114, Expect=2e-28]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=110, Expect=1e-27]} {Dmel: FBgn0003326, sca, scabrous, [Score=108, Expect=3e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=4e-26]} {RNA1310_36897.1} {RNA815_29373}

Cumulative graph for MligTC455_18113

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.858	3.447	0.18331	0.81311
RegionR2	-0.774	3.447	0.19777	0.55693
RegionR3	-0.157	3.447	0.76271	1.00000
RegionR4	1.35	3.447	0.03004	0.13606
RegionR5	0.537	3.447	0.27566	0.60206
RegionR6	1.11	3.447	0.01928	0.24946
RegionR7	-0.092	3.447	0.88866	1.00000
RegionR8	-0.116	3.447	0.87828	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.871	3.447	0.26130	0.96822
RegenerationR2	-0.095	3.447	0.85452	1.00000
RegenerationR3	0.166	3.447	0.77217	0.97230
RegenerationR4	-0.778	3.447	0.19309	0.63772
RegenerationR5	-0.48	3.447	0.38140	0.78749
RegenerationR6	-1.226	3.447	0.03078	0.21893
RegenerationBL	-2.232	3.447	0.00397	0.05641
RegenerationTP	0.084	3.447	0.90594	1.00000

Genes with expression patterns similar to MligTC455_18113

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18113	419	8.72	Mlig455_056777	Neo: - Age: -	FCN2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_056777 {REF} {Length: 1935} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=150.8]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=113, Expect=1e-28]; ENSG00000085265, FCN1, ficolin 1, [Score=112, Expect=3e-28]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [Score=112, Expect=2e-27]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=111, Expect=4e-27]} {Mouse: ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=114, Expect=2e-28]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=110, Expect=1e-27]} {Dmel: FBgn0003326, sca, scabrous, [Score=108, Expect=3e-26]} {Celegans: WBGene00020516, T15B7.1, [Score=52.8, Expect=1e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=107, Expect=4e-26]} {RNA1310_36897.1} {RNA815_29373}
2.	MligTC455_17574	150	3.12	Mlig455_068350	Neo: - Age: Down-Up-Down		0.963	-	-	-	-	0.963	-	Mlig455_068350 {REF} {Length: 353} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_37276} {RNA1310_21851} {RNA815_12138.1}
3.	MligTC455_33086	335	6.97	Mlig455_067414, Mlig455_069549	Neo: - Age: Up-Down-Up Region-enriched R7: 2.760/0.00678	BRAF	0.961	-	-	-	-	-	0.961	Mlig455_067414 {REF} {Length: 2697} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_52842} {RNA815_31190} Mlig455_069549 {REF} {Length: 2704} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_12825} {RNA815_31190}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_18113

419

8.72

Mlig455_056777

Neo: -

Age: -

FCN2

1.000

MligTC455_17574

150

3.12

Mlig455_068350

Neo: -

Age: Down-Up-Down

0.963

Mlig455_068350 {REF} {Length: 353} {TRANSSPLICED} {Pfam: PET assembly of cytochrome c oxidase, mitochondrial [PF15786.7, score=45.7]} {RNA1509_37276} {RNA1310_21851} {RNA815_12138.1}

MligTC455_33086

335

6.97

Mlig455_067414, Mlig455_069549

Neo: -

Age: Up-Down-Up

Region-enriched R7: 2.760/0.00678

BRAF

0.961

Mlig455_067414 {REF} {Length: 2697} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_52842} {RNA815_31190}

Mlig455_069549 {REF} {Length: 2704} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=79.5]; Protein kinase domain [PF00069.27, score=54.0]; Kinase-like [PF14531.8, score=30.9]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=79.0, Expect=2e-16]; ENSG00000141068, KSR1, kinase suppressor of ras 1, [Score=77.4, Expect=8e-16]} {Mouse: ENSMUSG00000018334, Ksr1, kinase suppressor of ras 1, [Score=80.5, Expect=5e-17]; ENSMUSG00000002413, Braf, Braf transforming gene, [Score=79.0, Expect=1e-16]} {Dmel: FBgn0003079, Raf, Raf oncogene, [Score=79.3, Expect=8e-17]} {Celegans: WBGene00002239, ksr-1, Kinase suppressor of Ras A, [Score=87.8, Expect=8e-20]} {Smed: dd_Smed_v6_8845_0_1, dd_Smed_v6_8845_0_1, [Score=190, Expect=1e-56]} {RNA1509_56455} {RNA1310_12825} {RNA815_31190}