Data search
Results for MligTC455_18141
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18141 | 29 | 0.61 | Mlig455_017538 | Neo: - Age: - |
Mlig455_017538 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_73960} {RNA815_49287} |
Cumulative graph for MligTC455_18141
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_18141
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18141 | 29 | 0.61 | Mlig455_017538 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_017538 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_73960} {RNA815_49287} | |
| 2. | MligTC455_34460 | 1343 | 27.99 | Mlig455_008843, Mlig455_008945 | Neo: - Age: - Region-enriched R7: 4.606/0.00000 |
CELF3, CELF6 | 0.971 | - | - | - | - | - | 0.971 | Mlig455_008843 {REF} {Length: 4989} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=180.7]; RNA recognition motif [PF16367.7, score=26.7]} {Human: ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=419, Expect=2e-142]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=433, Expect=5e-148]} {Dmel: FBgn0262475, bru2, bruno 2, [Score=350, Expect=2e-112]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=270, Expect=8e-85]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [Score=442, Expect=5e-151]} {RNA1509_31520, RNA1509_34271} {RNA1310_10251.1, RNA1509_31520, RNA1509_34271} {RNA1509_31520, RNA1509_34271, RNA815_6403.2} Mlig455_008945 {REF} {Length: 2838} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.6]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=311, Expect=5e-101]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=309, Expect=4e-100]; ENSG00000273025, AC009690.3, novel transcript, [Score=306, Expect=8e-99]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=306, Expect=8e-99]} {Mouse: ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=315, Expect=5e-102]; ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=310, Expect=1e-101]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=308, Expect=1e-99]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=305, Expect=1e-99]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=172, Expect=1e-48]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=358, Expect=6e-120]} {RNA1509_34271} {RNA1310_10251.1} {RNA815_6403.2} |
| 3. | MligTC455_25910 | 1497 | 31.19 | Mlig455_060391 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.272 Region-enriched R4: 3.104/0.00216 |
ACSL6 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_060391 {REF} {Length: 5004} {Pfam: AMP-binding enzyme [PF00501.30, score=326.0]; AMP-binding enzyme C-terminal domain [PF13193.8, score=21.7]} {Human: ENSG00000164398, ACSL6, acyl-CoA synthetase long chain family member 6, [Score=547, Expect=0.0]; ENSG00000197142, ACSL5, acyl-CoA synthetase long chain family member 5, [Score=542, Expect=0.0]; ENSG00000151726, ACSL1, acyl-CoA synthetase long chain family member 1, [Score=530, Expect=0.0]} {Mouse: ENSMUSG00000020333, Acsl6, acyl-CoA synthetase long-chain family member 6, [Score=542, Expect=0.0]; ENSMUSG00000018796, Acsl1, acyl-CoA synthetase long-chain family member 1, [Score=533, Expect=0.0]; ENSMUSG00000024981, Acsl5, acyl-CoA synthetase long-chain family member 5, [Score=532, Expect=0.0]} {Dmel: FBgn0036821, CG3961, [Score=522, Expect=2e-178]} {Celegans: WBGene00022037, acs-13, Fatty Acid CoA Synthetase family, [Score=493, Expect=6e-167]} {Smed: dd_Smed_v6_2009_0_2, dd_Smed_v6_2009_0_2, [RH, Score=462, Expect=7e-155]} {RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194} {RNA1310_9820, RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194} {RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194, RNA815_3547} |
| 4. | MligTC455_27963 | 8653 | 180.26 | Mlig455_039688 | Neo: - Age: Down-Up-Up Region-enriched R7: 2.206/0.00003 Regeneration-downregulated BL: -3.093 Regeneration-depleted BL: -3.093 |
0.967 | - | - | - | - | - | 0.967 | Mlig455_039688 {REF} {Length: 1076} {Smed: dd_Smed_v6_2575_0_1, dd_Smed_v6_2575_0_1, [Score=49.7, Expect=2e-08]} {RNA1509_36512, RNA1509_55770} {RNA1310_68229, RNA1509_36512} {RNA1509_36512, RNA815_28504} | |
| 5. | MligTC455_27520 | 1983 | 41.32 | Mlig455_050045, Mlig455_054023 | Neo: - Age: logFC(26M/2M)=-0.596 |
ABCG2 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_050045 {REF} {Length: 2545} {Pfam: ABC-2 type transporter [PF01061.26, score=101.6]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=89.7, Expect=9e-19]} {Mouse: ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [Score=87.4, Expect=4e-18]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=157, Expect=9e-42]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=78.2, Expect=2e-15]} {Smed: dd_Smed_v6_4142_0_1, dd_Smed_v6_4142_0_1, [Score=76.3, Expect=2e-15]} {RNA1509_2777} {RNA1310_8975.1} {RNA815_1994.2} Mlig455_054023 {REF} {Length: 3295} {Pfam: ABC transporter [PF00005.29, score=96.5]; ABC-2 type transporter [PF01061.26, score=79.8]; ABC-2 type transporter [PF19055.2, score=50.3]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=25.7]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=212, Expect=1e-60]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=212, Expect=5e-61]; ENSMUSG00000024254, Abcg8, ATP binding cassette subfamily G member 8, [Score=202, Expect=7e-57]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=333, Expect=4e-103]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=204, Expect=3e-58]} {Smed: dd_Smed_v6_8560_0_1, dd_Smed_v6_8560_0_1, [Score=196, Expect=7e-55]} {RNA1509_2777} {RNA1310_8975.1, RNA1509_2777} {RNA1509_2777, RNA815_1994.2} |
| 6. | MligTC455_24028 | 4831 | 100.64 | Mlig455_045099 | Neo: - Age: Down-Up-Up Region-enriched R7: 4.473/0.00000 Regeneration-downregulated BL: -5.638 Regeneration-depleted BL: -5.638 |
0.963 | - | - | - | - | - | 0.963 | Mlig455_045099 {REF} {Length: 970} {Pfam: FMRFamide related peptide family [PF01581.18, score=27.3]} {Celegans: WBGene00001449, flp-6, FMRFamide-like neuropeptides 6 QQDSEVEREMM KSAYMRF-amide 1 KSAYMRF-amide 2 KSAYMRF-amide 3 KSAYMRF-amide 4 KSAYMRF-amide 5 KSAYMRF-amide 6, [Score=45.8, Expect=5e-06]} {Smed: dd_Smed_v6_1724_0_1, dd_Smed_v6_1724_0_1, [Score=43.5, Expect=5e-06]} {RNA1509_13084} {RNA1310_66177} {RNA815_9232.1} | |
| 7. | MligTC455_19719 | 160 | 3.32 | Mlig455_062741 | Neo: - Age: - |
ANKUB1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_062741 {REF} {Length: 2758} {Pfam: Ubiquitin family [PF00240.25, score=30.6]} {Human: ENSG00000206199, ANKUB1, ankyrin repeat and ubiquitin domain containing 1, [Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000074591, Ankub1, ankrin repeat and ubiquitin domain containing 1, [Score=248, Expect=3e-74]} {Smed: dd_Smed_v6_9027_0_1, dd_Smed_v6_9027_0_1, [Score=470, Expect=8e-159]} {RNA1509_38601} {RNA1310_11316.1} {RNA815_657.1} |