Data search
Results for MligTC455_34460
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34460 | 1343 | 27.99 | Mlig455_008843, Mlig455_008945 | Neo: - Age: - Region-enriched R7: 4.606/0.00000 |
CELF3, CELF6 | Mlig455_008843 {REF} {Length: 4989} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=180.7]; RNA recognition motif [PF16367.7, score=26.7]} {Human: ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=419, Expect=2e-142]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=433, Expect=5e-148]} {Dmel: FBgn0262475, bru2, bruno 2, [Score=350, Expect=2e-112]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=270, Expect=8e-85]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [Score=442, Expect=5e-151]} {RNA1509_31520, RNA1509_34271} {RNA1310_10251.1, RNA1509_31520, RNA1509_34271} {RNA1509_31520, RNA1509_34271, RNA815_6403.2} Mlig455_008945 {REF} {Length: 2838} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.6]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=311, Expect=5e-101]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=309, Expect=4e-100]; ENSG00000273025, AC009690.3, novel transcript, [Score=306, Expect=8e-99]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=306, Expect=8e-99]} {Mouse: ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=315, Expect=5e-102]; ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=310, Expect=1e-101]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=308, Expect=1e-99]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=305, Expect=1e-99]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=172, Expect=1e-48]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=358, Expect=6e-120]} {RNA1509_34271} {RNA1310_10251.1} {RNA815_6403.2} |
Cumulative graph for MligTC455_34460
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -8.108 | 4.99 | 0.00944 | 0.28571 | |
| RegionR2 | 1.605 | 4.99 | 0.10706 | 0.40351 | |
| RegionR3 | -0.183 | 4.99 | 0.90152 | 1.00000 | |
| RegionR4 | -0.83 | 4.99 | 0.97932 | 1.00000 | |
| RegionR5 | -0.944 | 4.99 | 0.98434 | 1.00000 | |
| RegionR6 | 1.811 | 4.99 | 0.02764 | 0.30550 | |
| RegionR7 | 4.606 | 4.99 | 0.00000 | 0.00000 | |
| RegionR8 | 2.043 | 4.99 | 0.01815 | 0.26190 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.472 | 4.99 | 0.99995 | 1.00000 | |
| RegenerationR2 | -0.584 | 4.99 | 0.44465 | 0.84291 | |
| RegenerationR3 | -0.102 | 4.99 | 0.89761 | 1.00000 | |
| RegenerationR4 | -0.551 | 4.99 | 0.52139 | 0.87970 | |
| RegenerationR5 | -0.184 | 4.99 | 0.82337 | 0.99527 | |
| RegenerationR6 | -1.264 | 4.99 | 0.11571 | 0.41892 | |
| RegenerationBL | -1.576 | 4.99 | 0.04129 | 0.23114 | |
| RegenerationTP | -1.857 | 4.99 | 0.02092 | 0.24756 |
Genes with expression patterns similar to MligTC455_34460
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34460 | 1343 | 27.99 | Mlig455_008843, Mlig455_008945 | Neo: - Age: - Region-enriched R7: 4.606/0.00000 |
CELF3, CELF6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008843 {REF} {Length: 4989} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=180.7]; RNA recognition motif [PF16367.7, score=26.7]} {Human: ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [RH, Score=419, Expect=2e-142]} {Mouse: ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [RH, Score=433, Expect=5e-148]} {Dmel: FBgn0262475, bru2, bruno 2, [Score=350, Expect=2e-112]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=270, Expect=8e-85]} {Smed: dd_Smed_v6_14010_0_2, dd_Smed_v6_14010_0_2, [Score=442, Expect=5e-151]} {RNA1509_31520, RNA1509_34271} {RNA1310_10251.1, RNA1509_31520, RNA1509_34271} {RNA1509_31520, RNA1509_34271, RNA815_6403.2} Mlig455_008945 {REF} {Length: 2838} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=128.6]} {Human: ENSG00000159409, CELF3, CUGBP Elav-like family member 3, [Score=311, Expect=5e-101]; ENSG00000161082, CELF5, CUGBP Elav-like family member 5, [Score=309, Expect=4e-100]; ENSG00000273025, AC009690.3, novel transcript, [Score=306, Expect=8e-99]; ENSG00000140488, CELF6, CUGBP Elav-like family member 6, [Score=306, Expect=8e-99]} {Mouse: ENSMUSG00000024268, Celf4, CUGBP, Elav-like family member 4, [Score=315, Expect=5e-102]; ENSMUSG00000028137, Celf3, CUGBP, Elav-like family member 3, [Score=310, Expect=1e-101]; ENSMUSG00000032297, Celf6, CUGBP, Elav-like family member 6, [Score=308, Expect=1e-99]} {Dmel: FBgn0264001, bru3, bruno 3, [Score=305, Expect=1e-99]} {Celegans: WBGene00006807, unc-75, Putative RNA-binding protein, [RH, Score=172, Expect=1e-48]} {Smed: dd_Smed_v6_11349_0_1, dd_Smed_v6_11349_0_1, [Score=358, Expect=6e-120]} {RNA1509_34271} {RNA1310_10251.1} {RNA815_6403.2} |
| 2. | MligTC455_19719 | 160 | 3.32 | Mlig455_062741 | Neo: - Age: - |
ANKUB1 | 1.753 | - | - | - | - | 0.779 | 0.974 | Mlig455_062741 {REF} {Length: 2758} {Pfam: Ubiquitin family [PF00240.25, score=30.6]} {Human: ENSG00000206199, ANKUB1, ankyrin repeat and ubiquitin domain containing 1, [Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000074591, Ankub1, ankrin repeat and ubiquitin domain containing 1, [Score=248, Expect=3e-74]} {Smed: dd_Smed_v6_9027_0_1, dd_Smed_v6_9027_0_1, [Score=470, Expect=8e-159]} {RNA1509_38601} {RNA1310_11316.1} {RNA815_657.1} |
| 3. | MligTC455_25910 | 1497 | 31.19 | Mlig455_060391 | Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.272 Region-enriched R4: 3.104/0.00216 |
ACSL6 | 1.723 | - | - | - | 0.758 | - | 0.965 | Mlig455_060391 {REF} {Length: 5004} {Pfam: AMP-binding enzyme [PF00501.30, score=326.0]; AMP-binding enzyme C-terminal domain [PF13193.8, score=21.7]} {Human: ENSG00000164398, ACSL6, acyl-CoA synthetase long chain family member 6, [Score=547, Expect=0.0]; ENSG00000197142, ACSL5, acyl-CoA synthetase long chain family member 5, [Score=542, Expect=0.0]; ENSG00000151726, ACSL1, acyl-CoA synthetase long chain family member 1, [Score=530, Expect=0.0]} {Mouse: ENSMUSG00000020333, Acsl6, acyl-CoA synthetase long-chain family member 6, [Score=542, Expect=0.0]; ENSMUSG00000018796, Acsl1, acyl-CoA synthetase long-chain family member 1, [Score=533, Expect=0.0]; ENSMUSG00000024981, Acsl5, acyl-CoA synthetase long-chain family member 5, [Score=532, Expect=0.0]} {Dmel: FBgn0036821, CG3961, [Score=522, Expect=2e-178]} {Celegans: WBGene00022037, acs-13, Fatty Acid CoA Synthetase family, [Score=493, Expect=6e-167]} {Smed: dd_Smed_v6_2009_0_2, dd_Smed_v6_2009_0_2, [RH, Score=462, Expect=7e-155]} {RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194} {RNA1310_9820, RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194} {RNA1509_24613, RNA1509_34306, RNA1509_38551, RNA1509_44375, RNA1509_45423, RNA1509_51565, RNA1509_55637, RNA1509_9194, RNA815_3547} |
| 4. | MligTC455_15645 | 14723 | 306.72 | Mlig455_015733, Mlig455_049437 | Neo: - Age: Down-Down-Up Region-enriched R7: 1.492/0.00234 Regeneration-downregulated BL: -2.677 Regeneration-depleted BL: -2.677 |
1.706 | - | - | - | - | 0.752 | 0.954 | Mlig455_015733 {REF} {Length: 960} {Pfam: SLBB domain [PF10531.11, score=20.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} Mlig455_049437 {REF} {Length: 994} {Pfam: YtkA-like [PF13115.8, score=24.2]} {RNA1509_3484} {RNA1310_43598.2} {RNA815_17382} |
|
| 5. | MligTC455_46744 | 268 | 5.58 | Mlig455_018072 | Neo: - |
1.694 | - | 0.727 | 0.967 | - | - | - | Mlig455_018072 {REF} {Length: 1515} {Pfam: TNF(Tumour Necrosis Factor) family [PF00229.20, score=19.2]} {RNA1509_52366} {RNA1310_36796} {RNA815_38428} | |
| 6. | MligTC455_18141 | 29 | 0.61 | Mlig455_017538 | Neo: - Age: - |
0.971 | - | - | - | - | - | 0.971 | Mlig455_017538 {REF} {Length: 490} {NoTransDecoderORF} {RNA1310_73960} {RNA815_49287} | |
| 7. | MligTC455_19768 | 85 | 1.77 | Mlig455_024294 | Neo: - Age: Up-Down-Down |
0.967 | - | - | 0.967 | - | - | - | Mlig455_024294 {REF} {Length: 7503} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=45.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=27.8]} {RNA1509_39072} {RNA1310_19077.2} {RNA815_33603} | |
| 8. | MligTC455_27110 | 134 | 2.79 | Mlig455_035399, Mlig455_061038 | Neo: - Age: - Region-enriched R4: 5.163/0.00239 |
ANGPT4 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_035399 {REF} {Length: 860} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=112.3]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=96.3, Expect=5e-22]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=94.7, Expect=2e-21]; ENSG00000142748, FCN3, ficolin 3, [Score=94.0, Expect=5e-22]; ENSG00000085265, FCN1, ficolin 1, [Score=93.6, Expect=1e-21]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=93.6, Expect=4e-21]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=97.4, Expect=1e-22]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=94.7, Expect=1e-21]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=94.0, Expect=2e-21]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=93.2, Expect=3e-21]} {Dmel: FBgn0003326, sca, scabrous, [Score=90.1, Expect=4e-20]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=81.6, Expect=2e-17]} {RNA1509_28467} {RNA1310_63232} {RNA815_18070.1} Mlig455_061038 {REF} {Length: 1434} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=114.1]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=99.0, Expect=6e-23]; ENSG00000142748, FCN3, ficolin 3, [Score=98.6, Expect=1e-23]; ENSG00000085265, FCN1, ficolin 1, [Score=97.8, Expect=3e-23]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=96.3, Expect=5e-22]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=95.9, Expect=7e-22]; ENSG00000171557, FGG, fibrinogen gamma chain, [Score=94.4, Expect=2e-21]; ENSG00000160339, FCN2, ficolin 2, [Score=94.4, Expect=3e-22]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=98.6, Expect=6e-23]; ENSMUSG00000027460, Angpt4, angiopoietin 4, [Score=96.7, Expect=3e-22]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=96.3, Expect=4e-22]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=95.1, Expect=7e-22]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=94.0, Expect=6e-22]} {Dmel: FBgn0003326, sca, scabrous, [Score=92.8, Expect=6e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=83.6, Expect=4e-18]} {RNA1509_28467} {RNA1310_63232} {RNA815_18070.1} |
| 9. | MligTC455_18193 | 1385 | 28.85 | Mlig455_045570 | Neo: - Age: Down-Up-Down Region-enriched R2: 1.684/0.02988 |
0.965 | - | - | - | 0.965 | - | - | Mlig455_045570 {REF} {Length: 1473} {RNA1509_4681} {RNA1310_27199} {RNA815_12209} | |
| 10. | MligTC455_42699 | 1094 | 22.78 | Mlig455_014358 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.568 Region-enriched R2: 1.315/0.02072 |
YWHAE | 0.963 | - | - | - | - | 0.963 | - | Mlig455_014358 {REF} {Length: 1925} {Pfam: 14-3-3 protein [PF00244.22, score=229.3]} {Human: ENSG00000274474, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=275, Expect=3e-93]; ENSG00000108953, YWHAE, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon, [Score=275, Expect=3e-93]} {Mouse: ENSMUSG00000020849, Ywhae, tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide, [Score=275, Expect=2e-93]} {Dmel: FBgn0020238, 14-3-3epsilon, [Score=260, Expect=7e-88]} {Celegans: WBGene00001502, ftt-2, 14-3-3-like protein 2, [Score=208, Expect=1e-67]} {Smed: dd_Smed_v6_1702_0_1, dd_Smed_v6_1702_0_1, [Score=248, Expect=3e-83]} {RNA1509_43335} {RNA1310_15023.1} {RNA815_5579} |
| 11. | MligTC455_16176 | 76 | 1.58 | Mlig455_048486 | Neo: Int S/G2/M Age: - |
GCM1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_048486 {REF} {Length: 2372} {Pfam: GCM motif protein [PF03615.17, score=223.0]} {Human: ENSG00000137270, GCM1, glial cells missing homolog 1, [RH, Score=197, Expect=3e-57]; ENSG00000124827, GCM2, glial cells missing homolog 2, [RH, Score=191, Expect=2e-54]} {Mouse: ENSMUSG00000023333, Gcm1, glial cells missing homolog 1, [RH, Score=192, Expect=1e-55]; ENSMUSG00000021362, Gcm2, glial cells missing homolog 2, [RH, Score=189, Expect=1e-53]} {Dmel: FBgn0014179, gcm, glial cells missing, [RH, Score=230, Expect=2e-69]} {Smed: dd_Smed_v6_15107_0_1, dd_Smed_v6_15107_0_1, [RH, Score=186, Expect=3e-54]} {RNA1509_58813} {RNA1310_66943} {RNA815_43872} |
| 12. | MligTC455_43482 | 38 | 0.8 | Mlig455_025454 | Neo: - Age: - Region-enriched R7: 4.382/0.01218 |
NMBR | 0.957 | 0.957 | - | - | - | - | - | Mlig455_025454 {REF} {Length: 1900} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=90.7]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=81.3, Expect=3e-16]; ENSG00000186867, QRFPR, pyroglutamylated RFamide peptide receptor, [Score=79.0, Expect=2e-15]} {Mouse: ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=83.6, Expect=3e-17]; ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=80.1, Expect=6e-16]} {Dmel: FBgn0004842, RYa-R, RYamide receptor, [Score=65.9, Expect=2e-11]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=63.2, Expect=1e-10]} {Smed: dd_Smed_v6_43180_0_1, dd_Smed_v6_43180_0_1, [RH, Score=94.7, Expect=7e-22]} {RNA1310_40682.1} {RNA815_44468} |
| 13. | MligTC455_24786 | 300 | 6.25 | Mlig455_032143, Mlig455_049302 | Neo: - Age: logFC(26M/2M)=-0.528 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_032143 {REF} {Length: 358} {NoTransDecoderORF} {RNA1509_36687} {RNA1310_1894} {RNA815_5614.1} Mlig455_049302 {REF} {Length: 3378} {Pfam: PT repeat [PF04886.14, score=51.8]} {RNA1509_45844} {RNA1310_12902.2} {RNA815_515.1} |
|
| 14. | MligTC455_26251 | 74 | 1.54 | Mlig455_042876 | Neo: - Age: - |
0.951 | - | - | 0.951 | - | - | - | Mlig455_042876 {REF} {Length: 1584} {tRNA: Val(CAC),pseudo, score=36.5} {RNA1509_27801} {RNA1310_2677.1} {RNA815_43902} | |
| 15. | MligTC455_19250 | 57 | 1.18 | Mlig455_050978 | Neo: - Age: - |
RAC1 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_050978 {REF} {Length: 1505} {Pfam: Ras family [PF00071.24, score=152.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=64.4]; ADP-ribosylation factor family [PF00025.23, score=23.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=208, Expect=2e-68]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=203, Expect=2e-66]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=201, Expect=2e-65]; ENSG00000177105, RHOG, ras homolog family member G, [Score=199, Expect=7e-65]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=208, Expect=1e-68]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=203, Expect=1e-66]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=200, Expect=3e-65]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=199, Expect=5e-65]} {Dmel: FBgn0010333, Rac1, [Score=205, Expect=2e-67]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=211, Expect=6e-70]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=199, Expect=2e-65]} {RNA1310_32838} |