Data search
Results for MligTC455_18372
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18372 | 329 | 6.86 | Mlig455_046428, Mlig455_046471 | Neo: - Age: - Region-enriched R2: 2.381/0.02014 |
Mlig455_046428 {REF} {Length: 4464} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=46.6]; Zinc finger, C2H2 type [PF00096.28, score=32.8]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.3]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=20.6]} {RNA1509_21763} {RNA1310_9886.1, RNA1509_21763} {RNA1509_21763, RNA815_7892} Mlig455_046471 {REF} {Length: 3283} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc finger, C2H2 type [PF00096.28, score=32.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.4]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=20.3]} {RNA1509_21763} {RNA1310_9886.1} {RNA815_7892} |
Cumulative graph for MligTC455_18372
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.372 | 3.241 | 0.03197 | 0.45399 | |
| RegionR2 | 2.381 | 3.241 | 0.00089 | 0.02014 | |
| RegionR3 | 1.434 | 3.241 | 0.04495 | 0.37103 | |
| RegionR4 | 1.539 | 3.241 | 0.03119 | 0.13967 | |
| RegionR5 | 1.62 | 3.241 | 0.00906 | 0.05372 | |
| RegionR6 | 0.526 | 3.241 | 0.56946 | 1.00000 | |
| RegionR7 | 1.47 | 3.241 | 0.08113 | 0.54803 | |
| RegionR8 | -1.6 | 3.241 | 0.99715 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.346 | 3.241 | 0.99996 | 1.00000 | |
| RegenerationR2 | -0.961 | 3.241 | 0.01223 | 0.18055 | |
| RegenerationR3 | -0.204 | 3.241 | 0.65430 | 0.93077 | |
| RegenerationR4 | -0.523 | 3.241 | 0.26393 | 0.71167 | |
| RegenerationR5 | -0.133 | 3.241 | 0.73400 | 0.96530 | |
| RegenerationR6 | 1.194 | 3.241 | 0.02028 | 0.17588 | |
| RegenerationBL | 1.782 | 3.241 | 0.00474 | 0.06335 | |
| RegenerationTP | 0.266 | 3.241 | 0.78098 | 1.00000 |
Genes with expression patterns similar to MligTC455_18372
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18372 | 329 | 6.86 | Mlig455_046428, Mlig455_046471 | Neo: - Age: - Region-enriched R2: 2.381/0.02014 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046428 {REF} {Length: 4464} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=46.6]; Zinc finger, C2H2 type [PF00096.28, score=32.8]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.3]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=20.6]} {RNA1509_21763} {RNA1310_9886.1, RNA1509_21763} {RNA1509_21763, RNA815_7892} Mlig455_046471 {REF} {Length: 3283} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=47.2]; Zinc finger, C2H2 type [PF00096.28, score=32.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=23.4]; C2H2 type zinc-finger (1 copy) [PF16293.7, score=20.3]} {RNA1509_21763} {RNA1310_9886.1} {RNA815_7892} |
|
| 2. | MligTC455_18219 | 159 | 3.31 | Mlig455_030558 | Neo: - Age: logFC(26M/2M)=0.671 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_030558 {REF} {Length: 1656} {TRANSSPLICED} {RNA1310_40507.1} {RNA815_32588} | |
| 3. | MligTC455_33344 | 32 | 0.66 | Mlig455_002534 | Neo: - Age: Up-Down-Down |
0.964 | - | - | - | - | - | 0.964 | Mlig455_002534 {REF} {Length: 4448} {RNA1509_26266} {RNA1310_121715} {RNA815_60971} | |
| 4. | MligTC455_24930 | 43 | 0.89 | Mlig455_013159 | Neo: - Age: - |
AKAP7 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_013159 {REF} {Length: 1625} {TRANSSPLICED} {Pfam: AKAP7 2'5' RNA ligase-like domain [PF10469.11, score=91.6]; 2'-5' RNA ligase superfamily [PF13563.8, score=31.0]} {Human: ENSG00000118507, AKAP7, A-kinase anchoring protein 7, [Score=68.6, Expect=5e-13]} {RNA1509_38665} {RNA1310_8587.1} {RNA815_36346} |
| 5. | MligTC455_50019 | 248 | 5.17 | Mlig455_050542 | Neo: Int S/G2/M Age: Up-Up-Down |
NSD2 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849} |
| 6. | MligTC455_36605 | 27369 | 570.18 | Mlig455_009517 | Neo: Int S/G2/M |
RPS4X | 0.955 | - | - | - | - | - | 0.955 | Mlig455_009517 {REF} {Length: 1028} {TRANSSPLICED} {Pfam: Ribosomal family S4e [PF00900.22, score=115.2]; 40S ribosomal protein S4 C-terminus [PF16121.7, score=93.2]; RS4NT (NUC023) domain [PF08071.14, score=66.7]; KOW motif [PF00467.31, score=29.3]} {Human: ENSG00000198034, RPS4X, ribosomal protein S4 X-linked, [RH, Score=399, Expect=8e-142]; ENSG00000129824, RPS4Y1, ribosomal protein S4 Y-linked 1, [RH, Score=388, Expect=2e-137]} {Mouse: ENSMUSG00000031320, Rps4x, ribosomal protein S4, X-linked, [RH, Score=399, Expect=5e-142]} {Dmel: FBgn0011284, RpS4, Ribosomal protein S4, [RH, Score=372, Expect=3e-131]} {Celegans: WBGene00004473, rps-4, 40S ribosomal protein S4, [RH, Score=342, Expect=1e-119]} {Smed: dd_Smed_v6_82_0_1, dd_Smed_v6_82_0_1, [RH, Score=333, Expect=2e-116]} {RNA1509_1299, RNA1509_5828} {RNA1310_34304, RNA1509_1299, RNA1509_5828} {RNA1509_1299, RNA1509_5828, RNA815_15889.1} |
| 7. | MligTC455_48048 | 304 | 6.34 | Mlig455_065143 | Neo: Irradiation Age: Up-Down-Down |
0.954 | - | - | - | - | - | 0.954 | Mlig455_065143 {REF} {Length: 4336} {TRANSSPLICED} {RNA1509_46828} {RNA1310_6402.1, RNA1509_46828} {RNA1509_46828, RNA815_12174} | |
| 8. | MligTC455_20613 | 183 | 3.81 | Mlig455_030457 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.203/0.02582 |
ERCC6L | 0.952 | - | - | - | - | - | 0.952 | Mlig455_030457 {REF} {Length: 4294} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=194.8]; Helicase conserved C-terminal domain [PF00271.33, score=68.3]; Type III restriction enzyme, res subunit [PF04851.17, score=29.1]} {Human: ENSG00000186871, ERCC6L, ERCC excision repair 6 like, spindle assembly checkpoint helicase, [RH, Score=675, Expect=0.0]} {Mouse: ENSMUSG00000051220, Ercc6l, excision repair cross-complementing rodent repair deficiency complementation group 6 like, [RH, Score=696, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [Score=267, Expect=2e-75]} {Celegans: WBGene00004204, swsn-4, SWI/SNF nucleosome remodeling complex component; SWI2/SNF2-like protein, [Score=248, Expect=1e-66]} {Smed: dd_Smed_v6_11583_0_1, dd_Smed_v6_11583_0_1, [RH, Score=599, Expect=0.0]} {RNA1509_15313} {RNA1310_2005, RNA1509_15313} {RNA1509_15313, RNA815_13735} |
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