Data search
Results for MligTC455_18380
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18380 | 711 | 14.80 | Mlig455_009722 | Neo: - |
Mlig455_009722 {REF} {Length: 2730} {RNA1509_30117, RNA1509_49131} {RNA1310_33527, RNA1509_30117, RNA1509_49131} {RNA1509_30117, RNA1509_49131, RNA815_17493} |
Cumulative graph for MligTC455_18380
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.513 | 4.028 | 0.66863 | 1.00000 | |
| RegionR2 | 0.048 | 4.028 | 0.93673 | 1.00000 | |
| RegionR3 | 0.126 | 4.028 | 0.81257 | 1.00000 | |
| RegionR4 | 1.307 | 4.028 | 0.01692 | 0.09042 | |
| RegionR5 | 0.964 | 4.028 | 0.04091 | 0.16215 | |
| RegionR6 | -0.846 | 4.028 | 0.14946 | 0.68881 | |
| RegionR7 | 0.058 | 4.028 | 0.92586 | 1.00000 | |
| RegionR8 | -1.144 | 4.028 | 0.19286 | 0.78633 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.271 | 4.028 | 0.86167 | 1.00000 | |
| RegenerationR2 | 0.241 | 4.028 | 0.68042 | 0.94903 | |
| RegenerationR3 | 0.413 | 4.028 | 0.49925 | 0.85715 | |
| RegenerationR4 | 0.916 | 4.028 | 0.11462 | 0.51763 | |
| RegenerationR5 | 0.581 | 4.028 | 0.30644 | 0.73350 | |
| RegenerationR6 | 1.689 | 4.028 | 0.01137 | 0.13125 | |
| RegenerationBL | -0.203 | 4.028 | 0.79793 | 1.00000 | |
| RegenerationTP | 1.838 | 4.028 | 0.00765 | 0.14686 |
Genes with expression patterns similar to MligTC455_18380
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18380 | 711 | 14.8 | Mlig455_009722 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_009722 {REF} {Length: 2730} {RNA1509_30117, RNA1509_49131} {RNA1310_33527, RNA1509_30117, RNA1509_49131} {RNA1509_30117, RNA1509_49131, RNA815_17493} | |
| 2. | MligTC455_32355 | 3161 | 65.86 | Mlig455_039059, Mlig455_039064, Mlig455_042759 | Neo: - Age: logFC(26M/2M)=-0.376 |
1.696 | - | - | - | 0.740 | - | 0.956 | Mlig455_039059 {REF} {Length: 1573} {Pfam: SNO glutamine amidotransferase family [PF01174.21, score=157.3]; CobB/CobQ-like glutamine amidotransferase domain [PF07685.16, score=29.9]} {Smed: dd_Smed_v6_1595_0_1, dd_Smed_v6_1595_0_1, [RH, Score=164, Expect=1e-50]} {RNA1509_12607} {RNA1310_33530.1} {RNA815_15499.1} Mlig455_039064 {REF} {Length: 1299} {Pfam: SNO glutamine amidotransferase family [PF01174.21, score=157.3]; CobB/CobQ-like glutamine amidotransferase domain [PF07685.16, score=29.9]} {Smed: dd_Smed_v6_1595_0_1, dd_Smed_v6_1595_0_1, [RH, Score=164, Expect=1e-50]} {RNA1509_12607, RNA1509_19882, RNA1509_44819} {RNA1310_33530.1, RNA1509_19882, RNA1509_44819} {RNA1509_19882, RNA1509_44819, RNA815_15499.1} Mlig455_042759 {REF} {Length: 1247} {Pfam: SNO glutamine amidotransferase family [PF01174.21, score=157.6]; CobB/CobQ-like glutamine amidotransferase domain [PF07685.16, score=29.9]} {Smed: dd_Smed_v6_1595_0_1, dd_Smed_v6_1595_0_1, [RH, Score=165, Expect=3e-51]} {RNA1509_12607, RNA1509_22522} {RNA1310_33530.1, RNA1509_12607, RNA1509_22522} {RNA1509_12607, RNA1509_22522, RNA815_15499.1} |
|
| 3. | MligTC455_47761 | 494 | 10.28 | Mlig455_063306 | Neo: - Age: - |
NT5C3A | 0.962 | - | - | - | 0.962 | - | - | Mlig455_063306 {REF} {Length: 2529} {TRANSSPLICED} {Pfam: Pyrimidine 5'-nucleotidase (UMPH-1) [PF05822.14, score=255.4]; haloacid dehalogenase-like hydrolase [PF12710.9, score=26.5]} {Human: ENSG00000122643, NT5C3A, 5'-nucleotidase, cytosolic IIIA, [RH, Score=234, Expect=3e-74]} {Mouse: ENSMUSG00000029780, Nt5c3, 5'-nucleotidase, cytosolic III, [RH, Score=233, Expect=4e-74]} {Dmel: FBgn0034988, cN-IIIB, cytosolic 5'-nucleotidase IIIB, [RH, Score=184, Expect=5e-55]} {Celegans: WBGene00017775, F25B5.3, Putative cytosolic 5'-nucleotidase 3, [RH, Score=176, Expect=2e-51]} {Smed: dd_Smed_v6_3196_0_2, dd_Smed_v6_3196_0_2, [RH, Score=233, Expect=9e-74]} {RNA1509_27865, RNA1509_39066, RNA1509_45325} {RNA1310_20363, RNA1509_27865, RNA1509_39066, RNA1509_45325} {RNA1509_27865, RNA1509_39066, RNA1509_45325, RNA815_5383} |
| 4. | MligTC455_26893 | 269 | 5.61 | Mlig455_013044 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_013044 {REF} {Length: 350} {NoTransDecoderORF} {RNA1509_43421} {RNA1310_7853.1} {RNA815_5910} | |
| 5. | MligTC455_43744 | 1183 | 24.64 | Mlig455_067248 | Neo: - Age: - |
AASS | 0.951 | - | - | - | - | - | 0.951 | Mlig455_067248 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=155, Expect=2e-40]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=157, Expect=2e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=154, Expect=2e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=148, Expect=1e-38]} {RNA1509_8607} {RNA1310_22407.1} {RNA815_16220} |
Berezikov Lab - 2020-2021 © ERIBA