M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43744

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43744 1183 24.64 Mlig455_067248

Neo: -

Age: -

 AASS Mlig455_067248 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=155, Expect=2e-40]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=157, Expect=2e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=154, Expect=2e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=148, Expect=1e-38]} {RNA1509_8607} {RNA1310_22407.1} {RNA815_16220}

Cumulative graph for MligTC455_43744

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.392 4.826 0.59984 1.00000
RegionR2 -0.28 4.826 0.44976 0.83774
RegionR3 0.143 4.826 0.61938 1.00000
RegionR4 0.292 4.826 0.37488 0.69863
RegionR5 0.376 4.826 0.15068 0.40421
RegionR6 0.584 4.826 0.04104 0.38031
RegionR7 -0.347 4.826 0.36356 0.99897
RegionR8 -0.376 4.826 0.40979 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.312 4.826 0.78474 1.00000
RegenerationR2 -0.343 4.826 0.31335 0.75300
RegenerationR3 -0.324 4.826 0.35944 0.77619
RegenerationR4 -0.285 4.826 0.40985 0.82031
RegenerationR5 -0.313 4.826 0.33447 0.75412
RegenerationR6 -0.069 4.826 0.84041 0.99595
RegenerationBL -0.099 4.826 0.81284 1.00000
RegenerationTP 0.036 4.826 0.93843 1.00000


Genes with expression patterns similar to MligTC455_43744

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43744 1183 24.64 Mlig455_067248

Neo: -

Age: -

 AASS 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_067248 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=155, Expect=2e-40]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=157, Expect=2e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=154, Expect=2e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=148, Expect=1e-38]} {RNA1509_8607} {RNA1310_22407.1} {RNA815_16220}
2. MligTC455_39875 868 18.08 Mlig455_029063

Neo: Neoblast

Age: -

Regeneration-enriched TP: 2.429
Regeneration-enriched R6: 1.850

 EFTUD2 2.427 - - - 0.745 0.719 0.963 Mlig455_029063 {REF} {Length: 3992} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=123.8]; 116 kDa U5 small nuclear ribonucleoprotein component N-terminus [PF16004.7, score=123.1]; Elongation factor G, domain IV [PF03764.20, score=81.4]; Elongation factor G C-terminus [PF00679.26, score=74.7]; Elongation factor Tu domain 2 [PF03144.27, score=43.2]; Elongation Factor G, domain III [PF14492.8, score=26.8]} {Human: ENSG00000108883, EFTUD2, elongation factor Tu GTP binding domain containing 2, [RH, Score=1239, Expect=0.0]} {Mouse: ENSMUSG00000020929, Eftud2, elongation factor Tu GTP binding domain containing 2, [RH, Score=1242, Expect=0.0]} {Dmel: FBgn0039566, CG4849, [RH, Score=1254, Expect=0.0]} {Celegans: WBGene00001166, eftu-2, Elongation Factor TU family, [RH, Score=1177, Expect=0.0]} {Smed: dd_Smed_v6_4747_0_1, dd_Smed_v6_4747_0_1, [RH, Score=1150, Expect=0.0]} {RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163} {RNA1310_4304, RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163} {RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163, RNA815_1185}
3. MligTC455_38125 1068 22.25 Mlig455_039356

Neo: -

Age: logFC(26M/2M)=0.307

 SRPRA 2.368 - - - 0.704 0.704 0.960 Mlig455_039356 {REF} {Length: 3711} {TRANSSPLICED} {Pfam: Signal recognition particle, alpha subunit, N-terminal [PF04086.15, score=193.2]; SRP54-type protein, GTPase domain [PF00448.24, score=159.1]; SRP54-type protein, helical bundle domain [PF02881.21, score=32.5]; AAA ATPase domain [PF13191.8, score=25.2]; Methylmalonyl Co-A mutase-associated GTPase MeaB [PF03308.18, score=21.9]; CobQ/CobB/MinD/ParA nucleotide binding domain [PF01656.25, score=19.7]} {Human: ENSG00000182934, SRPRA, SRP receptor subunit alpha, [RH, Score=638, Expect=0.0]} {Mouse: ENSMUSG00000032042, Srpr, signal recognition particle receptor ('docking protein'), [Score=650, Expect=0.0]} {Dmel: FBgn0010391, Gtp-bp, GTP-binding protein, [Score=609, Expect=0.0]} {Celegans: WBGene00009521, F38A1.8, [RH, Score=524, Expect=2e-179]} {Smed: dd_Smed_v6_1375_0_1, dd_Smed_v6_1375_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_10861, RNA1509_7658, RNA1509_9355} {RNA1310_2507.1, RNA1509_10861, RNA1509_7658, RNA1509_9355} {RNA1509_10861, RNA1509_7658, RNA1509_9355, RNA815_944}
4. MligTC455_46090 1157 24.1 Mlig455_034703

Neo: -

Age: -

 KLF10 1.791 - - - 0.839 - 0.952 Mlig455_034703 {REF} {Length: 2186} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=46.9]; Zinc-finger double domain [PF13465.8, score=41.5]; C2H2-type zinc finger [PF13894.8, score=32.3]} {Human: ENSG00000155090, KLF10, Kruppel like factor 10, [Score=145, Expect=4e-39]; ENSG00000105610, KLF1, Kruppel like factor 1, [Score=139, Expect=1e-37]} {Mouse: ENSMUSG00000037465, Klf10, Kruppel-like factor 10, [RH, Score=143, Expect=2e-38]} {Dmel: FBgn0043364, cbt, cabut, [RH, Score=142, Expect=2e-38]} {Celegans: WBGene00018990, klf-1, Kruppel-Like Factor (Zinc finger protein), [Score=130, Expect=7e-34]} {Smed: dd_Smed_v6_3638_0_1, dd_Smed_v6_3638_0_1, [RH, Score=132, Expect=3e-37]} {RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717} {RNA1310_13888, RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717} {RNA1509_15495, RNA1509_53521, RNA1509_54191, RNA1509_55717, RNA815_19280}
5. MligTC455_22027 906 18.88 Mlig455_009586

Neo: -

Age: -

 USP49 1.747 - - - 0.793 - 0.954 Mlig455_009586 {REF} {Length: 4256} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=195.9]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=64.0]} {Human: ENSG00000164663, USP49, ubiquitin specific peptidase 49, [Score=278, Expect=3e-84]; ENSG00000136014, USP44, ubiquitin specific peptidase 44, [Score=273, Expect=6e-82]} {Mouse: ENSMUSG00000090115, Usp49, ubiquitin specific peptidase 49, [Score=284, Expect=2e-86]; ENSMUSG00000020020, Usp44, ubiquitin specific peptidase 44, [Score=283, Expect=6e-86]} {Dmel: FBgn0038862, Usp8, Ubiquitin specific protease 8, [Score=108, Expect=2e-25]} {Celegans: WBGene00010702, usp-33, Ubiquitin carboxyl-terminal hydrolase, [Score=94.0, Expect=8e-20]} {Smed: dd_Smed_v6_6489_0_1, dd_Smed_v6_6489_0_1, [Score=125, Expect=6e-30]} {RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809} {RNA1310_7678.1, RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809} {RNA1509_12069, RNA1509_24259, RNA1509_25953, RNA1509_39809, RNA815_3720}
6. MligTC455_14080 1422 29.63 Mlig455_014180, Mlig455_062760

Neo: -

Age: -

 TUSC3 1.745 - - - 0.795 - 0.950

Mlig455_014180 {REF} {Length: 2562} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=253.6]; Mitochondrial carrier protein [PF00153.29, score=183.3]} {Human: ENSG00000104723, TUSC3, tumor suppressor candidate 3, [RH, Score=302, Expect=5e-99]} {Mouse: ENSMUSG00000039530, Tusc3, tumor suppressor candidate 3, [Score=305, Expect=2e-99]; ENSMUSG00000031232, Magt1, magnesium transporter 1, [Score=295, Expect=3e-96]} {Dmel: FBgn0030218, CG1628, [RH, Score=315, Expect=6e-102]} {Celegans: WBGene00020422, T10F2.2, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_2352_0_1, dd_Smed_v6_2352_0_1, [Score=333, Expect=3e-111]} {RNA1509_16762, RNA1509_30199} {RNA1310_11980.2, RNA1509_30199} {RNA1509_30199, RNA815_5939}

Mlig455_062760 {REF} {Length: 2589} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=253.6]; Mitochondrial carrier protein [PF00153.29, score=183.3]} {Human: ENSG00000104723, TUSC3, tumor suppressor candidate 3, [RH, Score=302, Expect=5e-99]} {Mouse: ENSMUSG00000039530, Tusc3, tumor suppressor candidate 3, [Score=305, Expect=2e-99]; ENSMUSG00000031232, Magt1, magnesium transporter 1, [Score=295, Expect=3e-96]} {Dmel: FBgn0030218, CG1628, [RH, Score=315, Expect=6e-102]} {Celegans: WBGene00020422, T10F2.2, [RH, Score=305, Expect=3e-100]} {Smed: dd_Smed_v6_2352_0_1, dd_Smed_v6_2352_0_1, [Score=333, Expect=3e-111]} {RNA1509_16762} {RNA1310_11980.2} {RNA815_5939}
7. MligTC455_26894 254 5.29 Mlig455_013003

Neo: -

Age: -

Region-enriched R4: 4.231/0.00003
Region-enriched R5: 3.493/0.00001
Region-enriched R6: 2.802/0.00935

 1.735 - - - 0.781 - 0.954 Mlig455_013003 {REF} {Length: 782} {RNA1509_35352} {RNA1310_7853.1} {RNA815_5910}
8. MligTC455_49694 1017 21.19 Mlig455_048746

Neo: -

Age: logFC(26M/2M)=-0.252

 TAT 1.733 - - - 0.778 - 0.955 Mlig455_048746 {REF} {Length: 3838} {Pfam: Aminotransferase class I and II [PF00155.23, score=215.4]; Beta-eliminating lyase [PF01212.23, score=26.5]; Aminotransferase class-V [PF00266.21, score=26.4]; DegT/DnrJ/EryC1/StrS aminotransferase family [PF01041.19, score=25.4]; Cys/Met metabolism PLP-dependent enzyme [PF01053.22, score=22.1]} {Human: ENSG00000198650, TAT, tyrosine aminotransferase, [RH, Score=474, Expect=8e-165]} {Mouse: ENSMUSG00000001670, Tat, tyrosine aminotransferase, [RH, Score=483, Expect=2e-168]} {Dmel: FBgn0030558, CG1461, [RH, Score=448, Expect=2e-154]} {Celegans: WBGene00009628, tatn-1, Tyrosine AminoTraNsferase, [RH, Score=348, Expect=6e-116]} {Smed: dd_Smed_v6_1073_0_1, dd_Smed_v6_1073_0_1, [RH, Score=449, Expect=6e-156]} {RNA1509_38097, RNA1509_8811} {RNA1310_4309, RNA1509_38097, RNA1509_8811} {RNA1509_38097, RNA1509_8811, RNA815_5234}
9. MligTC455_29741 452 9.41 Mlig455_011625

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.646

 COX15 1.698 - - - 0.744 - 0.954 Mlig455_011625 {REF} {Length: 1980} {TRANSSPLICED} {Pfam: Cytochrome oxidase assembly protein [PF02628.17, score=312.0]} {Human: ENSG00000014919, COX15, cytochrome c oxidase assembly homolog COX15, [RH, Score=352, Expect=6e-118]} {Mouse: ENSMUSG00000040018, Cox15, cytochrome c oxidase assembly protein 15, [RH, Score=345, Expect=1e-115]} {Dmel: FBgn0034938, CG3803, [RH, Score=339, Expect=1e-113]} {Celegans: WBGene00011526, cox-15, Cytochrome OXidase assembly protein, [RH, Score=373, Expect=6e-127]} {Smed: dd_Smed_v6_5059_0_1, dd_Smed_v6_5059_0_1, [RH, Score=401, Expect=6e-138]} {RNA1509_14344} {RNA1310_20238} {RNA815_9503}
10. MligTC455_29381 347 7.22 Mlig455_005234, Mlig455_044030, Mlig455_068074

Neo: -

Age: logFC(26M/2M)=0.666

 1.689 - - - 0.735 - 0.954

Mlig455_005234 {REF} {Length: 1977} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}

Mlig455_044030 {REF} {Length: 7197} {RNA1509_34218} {RNA1310_18727} {RNA815_16176.1}

Mlig455_068074 {REF} {Length: 1624} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
11. MligTC455_44660 1073 22.35 Mlig455_065369

Neo: Neoblast

Age: -

Region-enriched R5: 1.108/0.00089

 1.67 - 0.704 - 0.966 - - Mlig455_065369 {REF} {Length: 2142} {TRANSSPLICED} {RNA1509_20744, RNA1509_21538} {RNA1310_25741, RNA1509_20744, RNA1509_21538} {RNA1509_20744, RNA1509_21538, RNA815_11214}
12. MligTC455_34699 581 12.11 Mlig455_009215

Neo: -

Age: -

 HGD 0.98 - - - 0.980 - - Mlig455_009215 {REF} {Length: 2257} {TRANSSPLICED} {Pfam: homogentisate 1,2-dioxygenase [PF04209.15, score=713.2]} {Human: ENSG00000113924, HGD, homogentisate 1,2-dioxygenase, [RH, Score=619, Expect=0.0]} {Mouse: ENSMUSG00000022821, Hgd, homogentisate 1, 2-dioxygenase, [RH, Score=621, Expect=0.0]} {Dmel: FBgn0040211, hgo, homogentisate 1,2-dioxygenase, [RH, Score=637, Expect=0.0]} {Celegans: WBGene00001843, hgo-1, Homogentisate 1,2-dioxygenase, [RH, Score=613, Expect=0.0]} {Smed: dd_Smed_v6_2908_0_1, dd_Smed_v6_2908_0_1, [RH, Score=586, Expect=0.0]} {RNA1509_15283, RNA1509_46787} {RNA1310_18945, RNA1509_46787} {RNA1509_46787, RNA815_2326}
13. MligTC455_47692 358 7.46 Mlig455_004798

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.250/0.00667

 0.971 - - - 0.971 - - Mlig455_004798 {REF} {Length: 1270} {NoTransDecoderORF} {RNA1509_31836} {RNA1310_47389, RNA1509_31836} {RNA1509_31836, RNA815_23742}
14. MligTC455_23756 324 6.75 Mlig455_015157

Neo: -

Age: -

 MOCS3 0.97 - - - - - 0.970 Mlig455_015157 {REF} {Length: 2497} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=204.2]; Rhodanese-like domain [PF00581.22, score=30.5]} {Human: ENSG00000124217, MOCS3, molybdenum cofactor synthesis 3, [RH, Score=342, Expect=1e-113]} {Mouse: ENSMUSG00000074576, Mocs3, molybdenum cofactor synthesis 3, [RH, Score=349, Expect=2e-116]} {Dmel: FBgn0032054, Uba4, Ubiquitin activating enzyme 4, [RH, Score=365, Expect=5e-123]} {Celegans: WBGene00018357, moc-3, Adenylyltransferase and sulfurtransferase MOCS3 Molybdopterin-synthase adenylyltransferase Molybdopterin-synthase sulfurtransferase, [RH, Score=325, Expect=4e-108]} {Smed: dd_Smed_v6_5985_0_1, dd_Smed_v6_5985_0_1, [RH, Score=345, Expect=2e-115]} {RNA1509_31779, RNA1509_4475} {RNA1310_9289.1, RNA1509_31779} {RNA1509_31779, RNA815_6343.1}
15. MligTC455_13179 625 13.03 Mlig455_006126

Neo: -

Age: logFC(26M/2M)=0.580

 RERE 0.966 - - - 0.966 - - Mlig455_006126 {REF} {Length: 3482} {TRANSSPLICED} {Pfam: BAH domain [PF01426.20, score=49.2]; ELM2 domain [PF01448.26, score=36.4]; BUD22 [PF09073.12, score=18.7]; Atrophin-1 family [PF03154.17, score=17.0]} {Human: ENSG00000142599, RERE, arginine-glutamic acid dipeptide repeats, [RH, Score=255, Expect=8e-70]} {Mouse: ENSMUSG00000039852, Rere, arginine glutamic acid dipeptide (RE) repeats, [RH, Score=254, Expect=2e-69]} {Dmel: FBgn0010825, Gug, Grunge, [RH, Score=157, Expect=8e-39]} {Celegans: WBGene00001194, egl-27, Egg-laying defective protein 27, [RH, Score=154, Expect=4e-38]} {Smed: dd_Smed_v6_6341_0_1, dd_Smed_v6_6341_0_1, [RH, Score=191, Expect=1e-49]} {RNA1509_37003, RNA1509_56991} {RNA1310_3861, RNA1509_56991} {RNA1509_56991, RNA815_1114.1}
16. MligTC455_45681 191 3.98 Mlig455_064284

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=8.087

 0.962 - - - - - 0.962 Mlig455_064284 {REF} {Length: 801} {NoTransDecoderORF} {RNA1509_2467} {RNA1310_27984.1} {RNA815_6585}
17. MligTC455_52578 318 6.62 Mlig455_060402

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 2.963

Regeneration-enriched BL: 2.963

 PEX1 0.962 - - - - - 0.962 Mlig455_060402 {REF} {Length: 3289} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=129.8]; AAA ATPase domain [PF13191.8, score=37.5]; NACHT domain [PF05729.14, score=26.5]; AAA domain (dynein-related subfamily) [PF07728.16, score=25.4]; AAA domain [PF13481.8, score=23.8]; AAA domain [PF13401.8, score=21.8]} {Human: ENSG00000127980, PEX1, peroxisomal biogenesis factor 1, [Score=207, Expect=7e-54]} {Mouse: ENSMUSG00000005907, Pex1, peroxisomal biogenesis factor 1, [Score=198, Expect=2e-51]} {Dmel: FBgn0013563, Pex1, Peroxin 1, [Score=210, Expect=1e-55]} {Celegans: WBGene00004191, prx-1, PeRoXisome assembly factor; Peroxin, [Score=202, Expect=3e-53]} {Smed: dd_Smed_v6_14189_0_1, dd_Smed_v6_14189_0_1, [Score=203, Expect=1e-53]} {RNA1509_12282} {RNA1310_3715.1} {RNA815_9596}
18. MligTC455_26835 1127 23.48 Mlig455_010954, Mlig455_033107, Mlig455_033135

Neo: -

Age: Down-Down-Up

 0.961 - - - - - 0.961

Mlig455_010954 {REF} {Length: 3832} {Pfam: Fibronectin type III domain [PF00041.23, score=20.8]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1}

Mlig455_033107 {REF} {Length: 3799} {Pfam: Immunoglobulin domain [PF13927.8, score=34.9]; Immunoglobulin I-set domain [PF07679.18, score=34.6]; Immunoglobulin domain [PF13895.8, score=31.0]; Immunoglobulin domain [PF00047.27, score=21.2]; Fibronectin type III domain [PF00041.23, score=21.0]} {RNA1509_13217} {RNA1310_2979.1, RNA1509_13217} {RNA1509_13217, RNA815_922.1}

Mlig455_033135 {REF} {Length: 3753} {Pfam: Immunoglobulin domain [PF13927.8, score=34.3]; Immunoglobulin I-set domain [PF07679.18, score=34.2]; Immunoglobulin domain [PF13895.8, score=30.9]; Fibronectin type III domain [PF00041.23, score=21.6]; Immunoglobulin domain [PF00047.27, score=20.3]} {RNA1509_13217} {RNA1310_2979.1} {RNA815_922.1}
19. MligTC455_36342 876 18.26 Mlig455_067427, Mlig455_069562

Neo: -

Age: Down-Up-Up

 TBX2 0.96 - - - - - 0.960

Mlig455_067427 {REF} {Length: 4570} {Pfam: T-box [PF00907.24, score=243.9]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=258, Expect=7e-79]; ENSG00000135111, TBX3, T-box 3, [Score=254, Expect=2e-77]} {Mouse: ENSMUSG00000000093, Tbx2, T-box 2, [Score=257, Expect=7e-79]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=254, Expect=1e-77]} {Dmel: FBgn0000179, bi, bifid, [Score=256, Expect=9e-77]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=242, Expect=3e-76]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=254, Expect=7e-79]} {RNA1509_22203} {RNA1310_19638, RNA1509_22203} {RNA1509_22203, RNA815_9309}

Mlig455_069562 {REF} {Length: 2538} {Pfam: T-box [PF00907.24, score=243.9]} {Human: ENSG00000121068, TBX2, T-box 2, [Score=258, Expect=7e-79]; ENSG00000135111, TBX3, T-box 3, [Score=254, Expect=2e-77]} {Mouse: ENSMUSG00000000093, Tbx2, T-box 2, [Score=257, Expect=7e-79]; ENSMUSG00000018604, Tbx3, T-box 3, [Score=254, Expect=1e-77]} {Dmel: FBgn0000179, bi, bifid, [Score=256, Expect=8e-77]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [Score=242, Expect=3e-76]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [Score=254, Expect=8e-79]} {RNA1509_22203} {RNA1310_19638} {RNA815_9309}
20. MligTC455_40449 1007 20.97 Mlig455_012604

Neo: -

Age: Down-Up-Down

 0.96 - - - - - 0.960 Mlig455_012604 {REF} {Length: 800} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=51.3]} {RNA1509_15023, RNA1509_51761} {RNA1310_43419.1, RNA1509_15023, RNA1509_51761} {RNA1509_15023, RNA1509_51761, RNA815_22350}
21. MligTC455_40776 712 14.84 Mlig455_000087

Neo: -

Age: -

 0.96 - - - - - 0.960 Mlig455_000087 {REF} {Length: 660} {NoTransDecoderORF} {RNA1509_37317, RNA1509_46432} {RNA1310_19375.2, RNA1509_46432} {RNA1509_46432, RNA815_7769}
22. MligTC455_31740 47 0.98 Mlig455_009305

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_009305 {REF} {Length: 2161} {RNA1509_41127} {RNA1310_45500} {RNA815_7423}
23. MligTC455_28365 270 5.63 Mlig455_068689

Neo: -

Age: Up-Down-Down

Region-enriched R5: 1.758/0.01074

 RTL1 0.958 - - - - - 0.958 Mlig455_068689 {REF} {Length: 9784} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=100.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]; Integrase core domain [PF00665.28, score=46.4]; Integrase zinc binding domain [PF17921.3, score=35.6]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.6]; Zinc knuckle [PF13696.8, score=21.3]; Zinc knuckle [PF00098.25, score=20.8]; Aspartyl protease [PF13650.8, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.4]; Aspartyl protease [PF09668.12, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.4, Expect=5e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=317, Expect=2e-94]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
24. MligTC455_30045 1464 30.5 Mlig455_067017, Mlig455_067057

Neo: -

Age: -

 UXS1 0.957 - - - - - 0.957

Mlig455_067017 {REF} {Length: 2328} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=198.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=168.4]; RmlD substrate binding domain [PF04321.19, score=40.6]; Male sterility protein [PF07993.14, score=39.1]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=32.7]; Polysaccharide biosynthesis protein [PF02719.17, score=31.5]} {Human: ENSG00000115652, UXS1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=2e-176]} {Mouse: ENSMUSG00000057363, Uxs1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=1e-176]} {Dmel: FBgn0035848, Uxs, UDP-xylose synthase, [RH, Score=483, Expect=6e-170]} {Celegans: WBGene00005019, sqv-1, SQuashed Vulva; UDP-glucuronic acid decarboxylase, [RH, Score=467, Expect=2e-163]} {Smed: dd_Smed_v6_8645_0_1, dd_Smed_v6_8645_0_1, [RH, Score=419, Expect=7e-146]} {RNA1509_12952, RNA1509_37901} {RNA1310_12806, RNA1509_12952, RNA1509_37901} {RNA1509_12952, RNA1509_37901, RNA815_9237}

Mlig455_067057 {REF} {Length: 2297} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=198.3]; NAD dependent epimerase/dehydratase family [PF01370.23, score=168.7]; RmlD substrate binding domain [PF04321.19, score=40.8]; Male sterility protein [PF07993.14, score=39.2]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=31.3]; Polysaccharide biosynthesis protein [PF02719.17, score=31.3]} {Human: ENSG00000115652, UXS1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=2e-176]} {Mouse: ENSMUSG00000057363, Uxs1, UDP-glucuronate decarboxylase 1, [RH, Score=499, Expect=1e-176]} {Dmel: FBgn0035848, Uxs, UDP-xylose synthase, [RH, Score=483, Expect=7e-170]} {Celegans: WBGene00005019, sqv-1, SQuashed Vulva; UDP-glucuronic acid decarboxylase, [RH, Score=467, Expect=2e-163]} {Smed: dd_Smed_v6_8645_0_1, dd_Smed_v6_8645_0_1, [RH, Score=419, Expect=7e-146]} {RNA1509_12952} {RNA1310_12806} {RNA815_9237}
25. MligTC455_47993 701 14.6 Mlig455_041093

Neo: -

Age: -

 LSM1 0.957 - - - 0.957 - - Mlig455_041093 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=48.3]} {Human: ENSG00000175324, LSM1, LSM1 homolog, mRNA degradation associated, [RH, Score=123, Expect=5e-36]} {Mouse: ENSMUSG00000037296, Lsm1, LSM1 homolog, mRNA degradation associated, [RH, Score=120, Expect=8e-35]} {Dmel: FBgn0261067, LSm1, Like Sm 1, [RH, Score=103, Expect=2e-28]} {Celegans: WBGene00003076, lsm-1, LSM Sm-like protein, [RH, Score=92.4, Expect=2e-24]} {Smed: dd_Smed_v6_6794_0_2, dd_Smed_v6_6794_0_2, [RH, Score=95.9, Expect=1e-25]} {RNA1509_23538} {RNA1310_19832.1} {RNA815_18339}
26. MligTC455_49106 1316 27.41 Mlig455_066709

Neo: -

Age: -

 LRMDA 0.957 - - - - - 0.957 Mlig455_066709 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=28.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.9]; Leucine rich repeat [PF13855.8, score=20.9]} {Human: ENSG00000148655, LRMDA, leucine rich melanocyte differentiation associated, [RH, Score=153, Expect=9e-46]} {Mouse: ENSMUSG00000063458, Lrmda, leucine rich melanocyte differentiation associated, [RH, Score=147, Expect=1e-43]} {Dmel: FBgn0051076, CG31076, [RH, Score=60.8, Expect=3e-11]} {Smed: dd_Smed_v6_1865_0_1, dd_Smed_v6_1865_0_1, [RH, Score=147, Expect=1e-43]} {RNA1509_11865} {RNA1310_18411} {RNA815_6884.1}
27. MligTC455_50452 856 17.83 Mlig455_061011

Neo: -

Age: -

Region-enriched R4: 1.811/0.02245
Region-enriched R5: 1.589/0.02679

 GPD2 0.957 - - - - - 0.957 Mlig455_061011 {REF} {Length: 2921} {TRANSSPLICED} {Pfam: FAD dependent oxidoreductase [PF01266.26, score=183.6]; C-terminal domain of alpha-glycerophosphate oxidase [PF16901.7, score=132.8]; EF-hand domain pair [PF13499.8, score=50.9]; FAD binding domain [PF00890.26, score=39.3]; EF hand [PF00036.34, score=35.9]; EF-hand domain [PF13405.8, score=32.7]; EF-hand domain pair [PF13833.8, score=28.8]; EF hand [PF13202.8, score=28.6]; FAD dependent oxidoreductase [PF12831.9, score=25.8]; FAD binding domain [PF01494.21, score=21.8]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.0]; Glucose inhibited division protein A [PF01134.24, score=19.8]} {Human: ENSG00000115159, GPD2, glycerol-3-phosphate dehydrogenase 2, [RH, Score=863, Expect=0.0]} {Mouse: ENSMUSG00000026827, Gpd2, glycerol phosphate dehydrogenase 2, mitochondrial, [RH, Score=847, Expect=0.0]} {Dmel: FBgn0022160, Gpo-1, Glycerophosphate oxidase-1, [RH, Score=822, Expect=0.0]} {Celegans: WBGene00012031, T25G3.4, Probable glycerol-3-phosphate dehydrogenase, mitochondrial, [RH, Score=776, Expect=0.0]} {Smed: dd_Smed_v6_4928_0_1, dd_Smed_v6_4928_0_1, [RH, Score=830, Expect=0.0]} {RNA1509_31434, RNA1509_3796} {RNA1310_6250.1, RNA1509_31434, RNA1509_3796} {RNA1509_31434, RNA1509_3796, RNA815_1850.1}
28. MligTC455_18430 222 4.62 Mlig455_037022

Neo: -

Age: -

Region-enriched R2: 3.547/0.02262
Region-enriched R6: 3.286/0.00457
Region-enriched R3: 3.022/0.00831

 0.955 - - - - - 0.955 Mlig455_037022 {REF} {Length: 1795} {RNA1509_34999} {RNA1310_18539} {RNA815_5633.1}
29. MligTC455_45534 2391 49.82 Mlig455_017306, Mlig455_045274

Neo: -

Age: -

 EXOC8 0.955 - - - - - 0.955

Mlig455_017306 {REF} {Length: 2676} {Pfam: Exocyst component 84 C-terminal [PF16528.7, score=84.7]; Vps51/Vps67 [PF08700.13, score=36.5]} {Human: ENSG00000116903, EXOC8, exocyst complex component 8, [RH, Score=214, Expect=5e-59]} {Mouse: ENSMUSG00000074030, Exoc8, exocyst complex component 8, [RH, Score=221, Expect=5e-62]} {Celegans: WBGene00013687, exoc-8, EXOCyst component, [RH, Score=104, Expect=5e-23]} {Smed: dd_Smed_v6_4043_0_1, dd_Smed_v6_4043_0_1, [RH, Score=203, Expect=5e-56]} {RNA1509_11766, RNA1509_31131, RNA1509_44329} {RNA1310_7711, RNA1509_11766, RNA1509_31131, RNA1509_44329} {RNA1509_11766, RNA1509_31131, RNA1509_44329, RNA815_7318}

Mlig455_045274 {REF} {Length: 2667} {Pfam: Exocyst component 84 C-terminal [PF16528.7, score=84.8]; Vps51/Vps67 [PF08700.13, score=36.5]} {Human: ENSG00000116903, EXOC8, exocyst complex component 8, [RH, Score=213, Expect=1e-58]} {Mouse: ENSMUSG00000074030, Exoc8, exocyst complex component 8, [RH, Score=219, Expect=3e-61]} {Smed: dd_Smed_v6_4043_0_1, dd_Smed_v6_4043_0_1, [RH, Score=201, Expect=2e-55]} {RNA1509_11766, RNA1509_19690} {RNA1310_7711, RNA1509_19690} {RNA1509_19690, RNA815_7318}
30. MligTC455_17327 681 14.19 Mlig455_013023, Mlig455_013072

Neo: Int S/G2/M

Age: -

 MLYCD 0.954 - - - - - 0.954

Mlig455_013023 {REF} {Length: 2671} {Pfam: Malonyl-CoA decarboxylase C-terminal domain [PF05292.13, score=268.5]; Malonyl-CoA decarboxylase N-terminal domain [PF17408.4, score=44.4]} {Human: ENSG00000103150, MLYCD, malonyl-CoA decarboxylase, [RH, Score=313, Expect=3e-102]} {Mouse: ENSMUSG00000074064, Mlycd, malonyl-CoA decarboxylase, [RH, Score=317, Expect=9e-104]} {Celegans: WBGene00009439, mlcd-1, MaLonyl CoA Decarboxylase, [RH, Score=223, Expect=3e-68]} {Smed: dd_Smed_v6_6439_0_1, dd_Smed_v6_6439_0_1, [RH, Score=302, Expect=7e-98]} {RNA1509_10767} {RNA1310_19073} {RNA815_8103.1}

Mlig455_013072 {REF} {Length: 3395} {Pfam: Malonyl-CoA decarboxylase C-terminal domain [PF05292.13, score=268.5]; Malonyl-CoA decarboxylase N-terminal domain [PF17408.4, score=44.8]} {Human: ENSG00000103150, MLYCD, malonyl-CoA decarboxylase, [RH, Score=313, Expect=3e-102]} {Mouse: ENSMUSG00000074064, Mlycd, malonyl-CoA decarboxylase, [RH, Score=317, Expect=1e-103]} {Celegans: WBGene00009439, mlcd-1, MaLonyl CoA Decarboxylase, [RH, Score=223, Expect=4e-68]} {Smed: dd_Smed_v6_6439_0_1, dd_Smed_v6_6439_0_1, [RH, Score=302, Expect=6e-98]} {RNA1509_10767, RNA1509_24671} {RNA1310_19073, RNA1509_10767, RNA1509_24671} {RNA1509_10767, RNA1509_24671, RNA815_8103.1}
31. MligTC455_45535 1051 21.89 Mlig455_045275

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_045275 {REF} {Length: 1529} {NoTransDecoderORF} {RNA1509_19690} {RNA1310_46357} {RNA815_25379}
32. MligTC455_04486 144 2.99 Mlig455_032800, Mlig455_058528

Neo: -

Age: -

 KIF26A 0.953 - - - - - 0.953

Mlig455_032800 {REF} {Length: 347} {Pfam: TMEM154 protein family [PF15102.8, score=19.8]}

Mlig455_058528 {REF} {Length: 5932} {Pfam: Kinesin motor domain [PF00225.25, score=150.1]; Microtubule binding [PF16796.7, score=38.9]} {Human: ENSG00000066735, KIF26A, kinesin family member 26A, [Score=333, Expect=4e-93]; ENSG00000162849, KIF26B, kinesin family member 26B, [Score=323, Expect=1e-89]; ENSG00000281216, KIF26B, kinesin family member 26B, [Score=323, Expect=8e-90]} {Mouse: ENSMUSG00000021294, Kif26a, kinesin family member 26A, [Score=366, Expect=6e-104]} {Dmel: FBgn0031955, CG14535, [Score=228, Expect=2e-60]} {Celegans: WBGene00006874, vab-8, Kinesin-like protein vab-8, [RH, Score=140, Expect=3e-33]} {Smed: dd_Smed_v6_13562_0_2, dd_Smed_v6_13562_0_2, [Score=370, Expect=4e-106]} {RNA1509_33919} {RNA1310_5463} {RNA815_17479}
33. MligTC455_25018 1343 27.99 Mlig455_008176

Neo: -

Age: Down-Up-Up

 TGM4 0.953 - - - - - 0.953 Mlig455_008176 {REF} {Length: 2648} {Pfam: Transglutaminase family [PF00868.22, score=57.4]; Transglutaminase-like superfamily [PF01841.21, score=54.3]; Transglutaminase family, C-terminal ig like domain [PF00927.24, score=38.6]} {Human: ENSG00000281886, TGM4, transglutaminase 4, [Score=348, Expect=2e-109]; ENSG00000163810, TGM4, transglutaminase 4, [Score=348, Expect=2e-109]; ENSG00000104055, TGM5, transglutaminase 5, [Score=331, Expect=1e-102]} {Mouse: ENSMUSG00000027401, Tgm3, transglutaminase 3, E polypeptide, [Score=327, Expect=1e-101]; ENSMUSG00000027403, Tgm6, transglutaminase 6, [Score=327, Expect=2e-101]; ENSMUSG00000025787, Tgm4, transglutaminase 4 (prostate), [Score=324, Expect=1e-100]; ENSMUSG00000022218, Tgm1, transglutaminase 1, K polypeptide, [Score=319, Expect=2e-97]; ENSMUSG00000053675, Tgm5, transglutaminase 5, [Score=314, Expect=3e-96]} {Dmel: FBgn0031975, Tg, Transglutaminase, [Score=343, Expect=7e-107]} {RNA1509_47119, RNA1509_8950} {RNA1310_8015.1, RNA1509_47119, RNA1509_8950} {RNA1509_47119, RNA1509_8950, RNA815_2840}
34. MligTC455_27004 325 6.76 Mlig455_030132

Neo: -

Age: -

 MGAT1 0.953 - - - - - 0.953 Mlig455_030132 {REF} {Length: 3167} {Pfam: GNT-I family [PF03071.17, score=239.3]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=149, Expect=3e-38]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=170, Expect=6e-46]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=164, Expect=7e-44]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_13024_0_1, dd_Smed_v6_13024_0_1, [Score=157, Expect=7e-42]} {RNA1509_17370} {RNA1310_6218.1} {RNA815_2982}
35. MligTC455_49105 1327 27.65 Mlig455_007366

Neo: -

Age: -

 LRMDA 0.953 - - - - - 0.953 Mlig455_007366 {REF} {Length: 2378} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=32.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=31.4]; Leucine rich repeat [PF13855.8, score=27.6]; Leucine Rich repeat [PF13516.8, score=19.8]} {Human: ENSG00000148655, LRMDA, leucine rich melanocyte differentiation associated, [RH, Score=156, Expect=9e-47]} {Mouse: ENSMUSG00000063458, Lrmda, leucine rich melanocyte differentiation associated, [RH, Score=150, Expect=9e-45]} {Dmel: FBgn0051076, CG31076, [RH, Score=63.2, Expect=4e-12]} {Smed: dd_Smed_v6_1865_0_1, dd_Smed_v6_1865_0_1, [RH, Score=152, Expect=4e-45]} {RNA1509_11865, RNA1509_18676, RNA1509_47182} {RNA1310_18411, RNA1509_11865, RNA1509_18676, RNA1509_47182} {RNA1509_11865, RNA1509_18676, RNA1509_47182, RNA815_6884.1}
36. MligTC455_49159 267 5.57 Mlig455_062353, Mlig455_062366

Neo: -

Age: -

Region-enriched R4: 3.582/0.01652

 0.953 - - - - - 0.953

Mlig455_062353 {REF} {Length: 739} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}

Mlig455_062366 {REF} {Length: 807} {RNA1509_34245} {RNA1310_30049} {RNA815_18326}
37. MligTC455_24161 394 8.22 Mlig455_014023

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_014023 {REF} {Length: 4313} {Pfam: Prominin [PF05478.13, score=32.3]} {Smed: dd_Smed_v6_6330_0_1, dd_Smed_v6_6330_0_1, [RH, Score=92.0, Expect=9e-19]} {RNA1509_15237, RNA1509_51109} {RNA1310_2052, RNA1509_15237, RNA1509_51109} {RNA1509_15237, RNA1509_51109, RNA815_750}
38. MligTC455_28361 440 9.16 Mlig455_040638

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.191/0.01323

Regeneration-upregulated R6: 2.081

Regeneration-enriched R6: 2.081

 RTL1 0.952 - - - - - 0.952 Mlig455_040638 {REF} {Length: 10716} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=102.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]; Integrase core domain [PF00665.28, score=46.4]; Integrase zinc binding domain [PF17921.3, score=36.9]; 'Cold-shock' DNA-binding domain [PF00313.24, score=29.1]; Zinc knuckle [PF13696.8, score=21.2]; Zinc knuckle [PF00098.25, score=20.9]; Aspartyl protease [PF13650.8, score=20.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.4]; H2C2 zinc finger [PF09337.12, score=19.7]; Aspartyl protease [PF09668.12, score=19.1]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=4e-20]} {Mouse: ENSMUSG00000033508, Asprv1, aspartic peptidase, retroviral-like 1, [Score=50.8, Expect=9e-06]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=317, Expect=3e-94]} {RNA1509_4878} {RNA1310_542.1} {RNA815_66.1}
39. MligTC455_30570 178 3.71 Mlig455_009373, Mlig455_009376, Mlig455_019017, Mlig455_022669, Mlig455_030380, Mlig455_051455

Neo: -

Age: Up-Down-Down

 NYNRIN 0.952 - - - - - 0.952

Mlig455_009373 {REF} {Length: 789} {Pfam: Retrotransposon gag protein [PF03732.19, score=22.8]; Winged helix DNA-binding domain [PF13601.8, score=19.6]} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=71.2, Expect=1e-15]} {RNA1509_8906} {RNA1310_4124} {RNA815_474.1}

Mlig455_009376 {REF} {Length: 442} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=103.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.3]; Integrase zinc binding domain [PF17921.3, score=56.6]; Integrase core domain [PF00665.28, score=45.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=39.5]; Aspartyl protease [PF13650.8, score=31.0]; Retrotransposon gag protein [PF03732.19, score=19.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=1e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.4, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=270, Expect=8e-75]} {RNA1509_8906} {RNA1310_4124} {RNA815_474.1}

Mlig455_019017 {REF} {Length: 3430} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.1]; Integrase zinc binding domain [PF17921.3, score=57.5]; Integrase core domain [PF00665.28, score=46.8]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=28.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=6e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=174, Expect=3e-48]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1}

Mlig455_022669 {REF} {Length: 3206} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.0]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=9e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=260, Expect=9e-73]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1}

Mlig455_030380 {REF} {Length: 4595} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=103.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.3]; Integrase zinc binding domain [PF17921.3, score=56.6]; Integrase core domain [PF00665.28, score=45.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=39.5]; Aspartyl protease [PF13650.8, score=31.0]; Retrotransposon gag protein [PF03732.19, score=19.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=1e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.4, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=270, Expect=8e-75]} {RNA1509_8906} {RNA1310_1712.2} {RNA815_474.1}

Mlig455_051455 {REF} {Length: 3023} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.8]; Integrase zinc binding domain [PF17921.3, score=57.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=56.6]; Integrase core domain [PF00665.28, score=46.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=7e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.4, Expect=2e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=259, Expect=7e-73]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1}
40. MligTC455_36626 996 20.75 Mlig455_019282

Neo: -

Age: Up-Down-Up

 0.952 - - - - - 0.952 Mlig455_019282 {REF} {Length: 2434} {Dmel: FBgn0032085, CG9555, [RH, Score=57.4, Expect=4e-09]} {RNA1509_28624} {RNA1310_8477} {RNA815_6363}
41. MligTC455_40932 906 18.88 Mlig455_051005

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R2: 1.781/0.01369

 MRPL41 0.952 - - - - - 0.952 Mlig455_051005 {REF} {Length: 1255} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L27 [PF09809.11, score=34.1]} {Human: ENSG00000182154, MRPL41, mitochondrial ribosomal protein L41, [RH, Score=45.8, Expect=2e-06]} {Mouse: ENSMUSG00000036850, Mrpl41, mitochondrial ribosomal protein L41, [RH, Score=50.1, Expect=3e-08]} {Smed: dd_Smed_v6_4151_0_1, dd_Smed_v6_4151_0_1, [RH, Score=67.4, Expect=6e-15]} {RNA1509_17563, RNA1509_20861, RNA1509_24532, RNA1509_33732, RNA1509_35091, RNA1509_48502} {RNA1310_55793.1, RNA1509_17563, RNA1509_20861, RNA1509_24532, RNA1509_33732, RNA1509_35091, RNA1509_48502} {RNA1509_17563, RNA1509_20861, RNA1509_24532, RNA1509_33732, RNA1509_35091, RNA1509_48502, RNA815_33856}
42. MligTC455_18380 711 14.8 Mlig455_009722

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.465

 0.951 - - - - - 0.951 Mlig455_009722 {REF} {Length: 2730} {RNA1509_30117, RNA1509_49131} {RNA1310_33527, RNA1509_30117, RNA1509_49131} {RNA1509_30117, RNA1509_49131, RNA815_17493}
43. MligTC455_31155 831 17.31 Mlig455_041818

Neo: Int S/G2/M

Age: Up-Down-Down

Region-enriched R4: 2.479/0.00098
Region-enriched R5: 2.397/0.00003

 RANBP2 0.951 - - - 0.951 - - Mlig455_041818 {REF} {Length: 8642} {TRANSSPLICED} {Pfam: RanBP1 domain [PF00638.20, score=351.3]; Tetratricopeptide repeat [PF13432.8, score=21.3]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=165, Expect=1e-39]} {Mouse: ENSMUSG00000003226, Ranbp2, RAN binding protein 2, [Score=243, Expect=1e-63]} {Dmel: FBgn0039302, Nup358, Nucleoporin 358kD, [RH, Score=261, Expect=2e-69]} {Celegans: WBGene00003795, npp-9, Nuclear Pore complex Protein, [RH, Score=251, Expect=8e-69]} {Smed: dd_Smed_v6_2979_0_1, dd_Smed_v6_2979_0_1, [RH, Score=143, Expect=7e-37]} {RNA1509_5818} {RNA1310_199.1} {RNA815_7098}
44. MligTC455_40279 259 5.4 Mlig455_026146

Neo: -

Age: Down-Up-Down

 0.951 - - - - - 0.951 Mlig455_026146 {REF} {Length: 2925} {Pfam: Delta serrate ligand [PF01414.21, score=30.7]} {RNA1509_39924} {RNA1310_12761.1, RNA1509_39924} {RNA1509_39924, RNA815_3894.1}
45. MligTC455_30822 74 1.54 Mlig455_009303

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_009303 {REF} {Length: 836} {Pfam: Commissureless [PF15957.7, score=22.5]} {RNA1310_50446.1} {RNA815_7423}
46. MligTC455_38242 389 8.09 Mlig455_029203

Neo: -

Age: logFC(26M/2M)=0.403

 RAB37 0.95 - - - - - 0.950 Mlig455_029203 {REF} {Length: 1188} {Pfam: Ras family [PF00071.24, score=178.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=104.8]; ADP-ribosylation factor family [PF00025.23, score=50.1]; 50S ribosome-binding GTPase [PF01926.25, score=23.0]; AAA domain [PF13479.8, score=21.5]} {Human: ENSG00000172794, RAB37, RAB37, member RAS oncogene family, [RH, Score=202, Expect=2e-65]; ENSG00000167964, RAB26, RAB26, member RAS oncogene family, [RH, Score=199, Expect=2e-63]} {Mouse: ENSMUSG00000020732, Rab37, RAB37, member RAS oncogene family, [RH, Score=203, Expect=1e-65]; ENSMUSG00000079657, Rab26, RAB26, member RAS oncogene family, [RH, Score=200, Expect=2e-63]} {Dmel: FBgn0086913, Rab26, [RH, Score=201, Expect=1e-62]} {Celegans: WBGene00004285, rab-37, RAB family, [RH, Score=177, Expect=2e-55]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=167, Expect=4e-52]} {RNA1509_41873} {RNA1310_29441, RNA1509_41873} {RNA1509_41873, RNA815_14790.1}
47. MligTC455_45604 2252 46.91 Mlig455_066910

Neo: Neoblast

Age: -

 GRPEL1 0.95 - - - 0.950 - - Mlig455_066910 {REF} {Length: 1287} {TRANSSPLICED} {Pfam: GrpE [PF01025.21, score=155.5]} {Human: ENSG00000109519, GRPEL1, GrpE like 1, mitochondrial, [RH, Score=161, Expect=5e-49]} {Mouse: ENSMUSG00000029198, Grpel1, GrpE-like 1, mitochondrial, [RH, Score=156, Expect=2e-47]} {Dmel: FBgn0014877, Roe1, [RH, Score=162, Expect=5e-50]} {Celegans: WBGene00007927, C34C12.8, GrpE protein homolog, mitochondrial, [RH, Score=137, Expect=7e-40]} {Smed: dd_Smed_v6_1172_0_1, dd_Smed_v6_1172_0_1, [RH, Score=154, Expect=8e-47]} {RNA1509_13899, RNA1509_16786} {RNA1310_25971, RNA1509_13899, RNA1509_16786} {RNA1509_13899, RNA1509_16786, RNA815_10875.1}
48. MligTC455_46525 451 9.4 Mlig455_058272

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.461

 0.95 - - - - - 0.950 Mlig455_058272 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: Ribosomal protein S15 [PF00312.24, score=27.0]} {RNA1509_10430, RNA1509_39368, RNA1509_40148} {RNA1310_25852, RNA1509_39368, RNA1509_40148} {RNA1509_39368, RNA1509_40148, RNA815_10720}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA