M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_18513

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18513 379 7.90 Mlig455_037306

Neo: -

Age: -

 CALM2 Mlig455_037306 {REF} {Length: 2151} {Pfam: EF hand [PF00036.34, score=110.6]; EF-hand domain pair [PF13499.8, score=108.5]; EF-hand domain [PF13405.8, score=88.7]; EF-hand domain pair [PF13833.8, score=86.3]; EF hand [PF13202.8, score=86.0]; EF-hand domain [PF14658.8, score=46.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=34.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=182, Expect=1e-58]; ENSG00000198668, CALM1, calmodulin 1, [Score=182, Expect=1e-58]; ENSG00000160014, CALM3, calmodulin 3, [Score=182, Expect=1e-58]; ENSG00000178363, CALML3, calmodulin like 3, [Score=177, Expect=6e-57]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=184, Expect=4e-59]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=182, Expect=7e-59]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=182, Expect=7e-59]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=181, Expect=2e-58]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=180, Expect=2e-58]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=179, Expect=3e-58]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=179, Expect=2e-58]} {RNA1509_20574} {RNA1310_23382} {RNA815_12969}

Cumulative graph for MligTC455_18513

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.917 3.269 0.04442 0.50707
RegionR2 0.81 3.269 0.16897 0.51437
RegionR3 0.53 3.269 0.22626 0.76797
RegionR4 -1.518 3.269 0.05374 0.20239
RegionR5 -3.714 3.269 0.00000 0.00000
RegionR6 -2.081 3.269 0.00080 0.03285
RegionR7 1.679 3.269 0.00202 0.05677
RegionR8 1.377 3.269 0.03997 0.39261

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.543 3.269 0.07150 0.75451
RegenerationR2 -0.724 3.269 0.14587 0.57740
RegenerationR3 0.148 3.269 0.80112 0.98293
RegenerationR4 0.389 3.269 0.59736 0.91242
RegenerationR5 2.044 3.269 0.01013 0.17788
RegenerationR6 0.123 3.269 0.88444 1.00000
RegenerationBL -1.369 3.269 0.13231 0.43368
RegenerationTP -0.272 3.269 0.67272 1.00000


Genes with expression patterns similar to MligTC455_18513

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18513 379 7.9 Mlig455_037306

Neo: -

Age: -

 CALM2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_037306 {REF} {Length: 2151} {Pfam: EF hand [PF00036.34, score=110.6]; EF-hand domain pair [PF13499.8, score=108.5]; EF-hand domain [PF13405.8, score=88.7]; EF-hand domain pair [PF13833.8, score=86.3]; EF hand [PF13202.8, score=86.0]; EF-hand domain [PF14658.8, score=46.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=34.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=182, Expect=1e-58]; ENSG00000198668, CALM1, calmodulin 1, [Score=182, Expect=1e-58]; ENSG00000160014, CALM3, calmodulin 3, [Score=182, Expect=1e-58]; ENSG00000178363, CALML3, calmodulin like 3, [Score=177, Expect=6e-57]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=184, Expect=4e-59]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=182, Expect=7e-59]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=182, Expect=7e-59]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=181, Expect=2e-58]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=180, Expect=2e-58]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=179, Expect=3e-58]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=179, Expect=2e-58]} {RNA1509_20574} {RNA1310_23382} {RNA815_12969}
2. MligTC455_19180 732 15.25 Mlig455_065589

Neo: -

Age: -

Region-enriched R8: 1.853/0.01583

 4.153 0.913 0.713 0.806 0.954 0.767 - Mlig455_065589 {REF} {Length: 1480} {Smed: dd_Smed_v6_5147_0_1, dd_Smed_v6_5147_0_1, [RH, Score=62.0, Expect=4e-11]} {RNA1509_38428} {RNA1310_38164} {RNA815_17603}
3. MligTC455_37537 203 4.23 Mlig455_047747

Neo: -

Age: -

Region-enriched R8: 3.525/0.01192

 KCNC2 3.181 0.760 0.955 0.740 - - 0.726 Mlig455_047747 {REF} {Length: 3532} {Pfam: Ion transport protein [PF00520.33, score=105.8]; BTB/POZ domain [PF02214.24, score=56.8]; Ion channel [PF07885.18, score=52.6]} {Human: ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=216, Expect=4e-60]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=215, Expect=5e-60]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [Score=207, Expect=1e-56]} {Mouse: ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=218, Expect=1e-60]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=214, Expect=6e-60]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=230, Expect=1e-65]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=211, Expect=5e-59]} {Smed: dd_Smed_v6_9740_0_2, dd_Smed_v6_9740_0_2, [Score=208, Expect=6e-58]} {RNA1509_26535} {RNA1310_14101} {RNA815_34993}
4. MligTC455_33072 230 4.8 Mlig455_052654

Neo: -

Age: -

Region-enriched R3: 2.742/0.03551

 2.73 - 0.941 - 0.960 0.829 - Mlig455_052654 {REF} {Length: 650} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57498} {RNA1310_24453.3} {RNA815_11507}
5. MligTC455_26773 225 4.68 Mlig455_038010

Neo: -

Age: logFC(26M/2M)=-0.420

Region-enriched R7: 3.223/0.00025
Region-enriched R2: 3.076/0.00620

 ANO7 2.6 0.807 - - 0.961 - 0.832 Mlig455_038010 {REF} {Length: 4566} {Pfam: Calcium-activated chloride channel [PF04547.14, score=519.7]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=242.9]} {Human: ENSG00000146205, ANO7, anoctamin 7, [RH, Score=874, Expect=0.0]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [RH, Score=885, Expect=0.0]} {Dmel: FBgn0038721, subdued, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=242, Expect=9e-68]} {Smed: dd_Smed_v6_4761_0_1, dd_Smed_v6_4761_0_1, [RH, Score=1090, Expect=0.0]} {RNA1509_15570} {RNA1310_5583.1, RNA1509_15570} {RNA1509_15570, RNA815_1646.1}
6. MligTC455_19179 442 9.21 Mlig455_059343

Neo: -

Age: Up-Down-Up

 2.385 - 0.703 0.730 0.952 - - Mlig455_059343 {REF} {Length: 1621} {Smed: dd_Smed_v6_5147_0_1, dd_Smed_v6_5147_0_1, [RH, Score=62.8, Expect=2e-11]} {RNA1509_38428} {RNA1310_38164} {RNA815_17603}
7. MligTC455_41856 833 17.36 Mlig455_021126, Mlig455_021127

Neo: -

Age: -

Region-enriched R8: 1.453/0.03195

 1.819 0.848 - - - - 0.971

Mlig455_021126 {REF} {Length: 1683} {Pfam: Profilin [PF00235.21, score=48.7]; Histone H1-like nucleoprotein HC2 [PF07382.13, score=29.2]} {RNA1509_36755} {RNA1310_41040} {RNA815_12700.1}

Mlig455_021127 {REF} {Length: 2189} {Pfam: Profilin [PF00235.21, score=49.0]} {RNA1509_11634, RNA1509_36755} {RNA1310_26877, RNA1509_11634, RNA1509_36755} {RNA1509_11634, RNA1509_36755, RNA815_12700.1}
8. MligTC455_33550 2612 54.42 Mlig455_009474

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-1.072

Region-enriched R2: 2.002/0.00035

 FBN2 1.804 - 0.963 - - 0.841 - Mlig455_009474 {REF} {Length: 17362} {Pfam: Calcium-binding EGF domain [PF07645.17, score=979.2]; EGF domain [PF12947.9, score=843.5]; Complement Clr-like EGF-like [PF12662.9, score=499.6]; EGF-like domain [PF00008.29, score=186.8]; von Willebrand factor type D domain [PF00094.27, score=136.1]; Human growth factor-like EGF [PF12661.9, score=131.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=37.5]; MSP1 EGF domain 1 [PF12946.9, score=22.6]; Pvs28 EGF domain [PF06247.13, score=20.7]; Coagulation Factor Xa inhibitory site [PF14670.8, score=20.0]} {Human: ENSG00000138829, FBN2, fibrillin 2, [RH, Score=597, Expect=5e-171]; ENSG00000166147, FBN1, fibrillin 1, [RH, Score=586, Expect=2e-167]; ENSG00000142449, FBN3, fibrillin 3, [RH, Score=575, Expect=4e-164]} {Mouse: ENSMUSG00000024598, Fbn2, fibrillin 2, [RH, Score=595, Expect=2e-170]} {Dmel: FBgn0053196, dpy, dumpy, [RH, Score=367, Expect=2e-100]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=246, Expect=3e-64]} {Smed: dd_Smed_v6_2649_0_1, dd_Smed_v6_2649_0_1, [RH, Score=2446, Expect=0.0]} {RNA1509_276} {RNA1310_12} {RNA815_32}
9. MligTC455_33549 2604 54.26 Mlig455_009464

Neo: -

Age: -

Region-enriched R2: 2.001/0.00039

 FBN2 1.803 - 0.963 - - 0.840 - Mlig455_009464 {REF} {Length: 1474} {Pfam: Calcium-binding EGF domain [PF07645.17, score=979.2]; EGF domain [PF12947.9, score=843.5]; Complement Clr-like EGF-like [PF12662.9, score=499.6]; EGF-like domain [PF00008.29, score=186.8]; von Willebrand factor type D domain [PF00094.27, score=136.1]; Human growth factor-like EGF [PF12661.9, score=131.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=37.5]; MSP1 EGF domain 1 [PF12946.9, score=22.6]; Pvs28 EGF domain [PF06247.13, score=20.7]; Coagulation Factor Xa inhibitory site [PF14670.8, score=20.0]} {Human: ENSG00000138829, FBN2, fibrillin 2, [RH, Score=597, Expect=5e-171]; ENSG00000166147, FBN1, fibrillin 1, [RH, Score=586, Expect=2e-167]; ENSG00000142449, FBN3, fibrillin 3, [RH, Score=575, Expect=4e-164]} {Mouse: ENSMUSG00000024598, Fbn2, fibrillin 2, [RH, Score=595, Expect=2e-170]} {Dmel: FBgn0053196, dpy, dumpy, [RH, Score=367, Expect=2e-100]} {Celegans: WBGene00022816, fbn-1, FBN-1A.1; FiBrilliN homolog, [Score=246, Expect=3e-64]} {Smed: dd_Smed_v6_2649_0_1, dd_Smed_v6_2649_0_1, [RH, Score=2446, Expect=0.0]} {RNA1509_276} {RNA1310_12} {RNA815_32}
10. MligTC455_15506 219 4.57 Mlig455_025204

Neo: -

Age: logFC(26M/2M)=-0.337

 ANKEF1 1.798 - 0.831 - - 0.967 - Mlig455_025204 {REF} {Length: 2950} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=181.3]; Ankyrin repeats (many copies) [PF13637.8, score=145.9]; Ankyrin repeats (many copies) [PF13857.8, score=133.7]; Ankyrin repeat [PF00023.32, score=131.5]; Ankyrin repeat [PF13606.8, score=130.5]} {Human: ENSG00000132623, ANKEF1, ankyrin repeat and EF-hand domain containing 1, [RH, Score=531, Expect=7e-178]} {Mouse: ENSMUSG00000074771, Ankef1, ankyrin repeat and EF-hand domain containing 1, [RH, Score=543, Expect=0.0]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=123, Expect=2e-28]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=120, Expect=1e-27]} {Smed: dd_Smed_v6_12476_0_1, dd_Smed_v6_12476_0_1, [RH, Score=731, Expect=0.0]} {RNA1509_36316, RNA1509_7497} {RNA1310_7884.1, RNA1509_36316, RNA1509_7497} {RNA1509_36316, RNA1509_7497, RNA815_1782}
11. MligTC455_52426 1375 28.64 Mlig455_011045, Mlig455_011048

Neo: -

Age: -

Region-enriched R7: 2.652/0.00000
Region-enriched R8: 1.605/0.00536
Region-enriched R2: 1.262/0.03915

Regeneration-downregulated BL: -4.528

Regeneration-depleted BL: -4.528

 1.789 - - - 0.967 - 0.822

Mlig455_011045 {REF} {Length: 2012} {Pfam: Agrin NtA domain [PF03146.17, score=18.6]} {RNA1509_20465, RNA1509_28949} {RNA1310_31587, RNA1509_20465, RNA1509_28949} {RNA1509_20465, RNA1509_28949, RNA815_13600}

Mlig455_011048 {REF} {Length: 1847} {Pfam: Agrin NtA domain [PF03146.17, score=18.6]} {RNA1509_28949} {RNA1310_31587} {RNA815_13600}
12. MligTC455_21524 575 11.98 Mlig455_047801

Neo: -

Age: -

 SLC26A5 1.738 - - - 0.765 - 0.973 Mlig455_047801 {REF} {Length: 3370} {Pfam: Sulfate permease family [PF00916.22, score=112.6]; STAS domain [PF01740.23, score=84.8]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=225, Expect=2e-64]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=224, Expect=3e-64]} {Dmel: FBgn0036770, Prestin, [Score=125, Expect=6e-30]} {Celegans: WBGene00020914, sulp-6, SULfate Permease family, [Score=156, Expect=4e-40]} {Smed: dd_Smed_v6_8150_0_1, dd_Smed_v6_8150_0_1, [Score=246, Expect=7e-72]} {RNA1509_42478} {RNA1310_3747.1} {RNA815_1075.1}
13. MligTC455_18512 655 13.65 Mlig455_026061

Neo: -

Age: -

Region-enriched R8: 2.653/0.00006

 CALM2 1.696 - - - - 0.724 0.972 Mlig455_026061 {REF} {Length: 1808} {Pfam: EF hand [PF00036.34, score=110.6]; EF-hand domain pair [PF13499.8, score=108.5]; EF-hand domain [PF13405.8, score=88.7]; EF-hand domain pair [PF13833.8, score=86.3]; EF hand [PF13202.8, score=86.0]; EF-hand domain [PF14658.8, score=46.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=34.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=181, Expect=1e-58]; ENSG00000198668, CALM1, calmodulin 1, [Score=181, Expect=1e-58]; ENSG00000160014, CALM3, calmodulin 3, [Score=181, Expect=1e-58]; ENSG00000178363, CALML3, calmodulin like 3, [Score=177, Expect=7e-57]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=184, Expect=5e-59]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=181, Expect=8e-59]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=181, Expect=2e-58]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=181, Expect=8e-59]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=180, Expect=2e-58]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=179, Expect=3e-58]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=179, Expect=3e-58]} {RNA1509_20574} {RNA1310_23382, RNA1509_20574} {RNA1509_20574, RNA815_12969}
14. MligTC455_43308 515 10.73 Mlig455_007837, Mlig455_021119

Neo: -

Age: -

Region-enriched R7: 4.797/0.00000

 0.965 - - - - - 0.965

Mlig455_007837 {REF} {Length: 466} {RNA1310_58059} {RNA815_34499}

Mlig455_021119 {REF} {Length: 472} {RNA1310_58059} {RNA815_34499}
15. MligTC455_51262 384 7.99 Mlig455_036989

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.021

Region-enriched R3: 4.958/0.00000
Region-enriched R2: 4.046/0.01134

 0.959 - - - - 0.959 - Mlig455_036989 {REF} {Length: 1396} {Pfam: Universal stress protein family [PF00582.28, score=85.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=97.4, Expect=8e-26]} {RNA1310_30400} {RNA815_28361}
16. MligTC455_24756 12400 258.33 Mlig455_017088

Neo: -

Age: Up-Down-Down

Region-specific R2: 1.814

Region-enriched R2: 1.884/0.00008

 SSPO 0.958 - 0.958 - - - - Mlig455_017088 {REF} {Length: 17786} {Pfam: von Willebrand factor type D domain [PF00094.27, score=205.1]; Spondin-like TSP1 domain [PF19028.2, score=137.7]; C8 domain [PF08742.13, score=88.2]; Trypsin Inhibitor like cysteine rich domain [PF01826.19, score=71.6]; Thrombospondin type 1 domain [PF00090.21, score=65.8]; Low-density lipoprotein receptor domain class A [PF00057.20, score=57.2]} {Human: ENSG00000197558, SSPO, SCO-spondin, [RH, Score=577, Expect=8e-164]} {Mouse: ENSMUSG00000029797, Sspo, SCO-spondin, [Score=512, Expect=2e-144]} {Dmel: FBgn0029167, Hml, Hemolectin, [Score=335, Expect=6e-91]} {Celegans: WBGene00003072, lrp-2, Low-density lipoprotein RecePtor related, [Score=127, Expect=2e-28]} {Smed: dd_Smed_v6_9342_0_1, dd_Smed_v6_9342_0_1, [RH, Score=1241, Expect=0.0]} {RNA1509_1916, RNA1509_4948} {RNA1310_608, RNA1509_4948} {RNA1509_4948, RNA815_152.1}
17. MligTC455_12477 124 2.58 Mlig455_044248

Neo: -

Age: -

 MAP3K19 0.957 - - - - 0.957 - Mlig455_044248 {REF} {Length: 4233} {Pfam: Protein kinase domain [PF00069.27, score=154.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=98.7]; Ankyrin repeats (3 copies) [PF12796.9, score=67.7]; Ankyrin repeat [PF00023.32, score=46.0]; Ankyrin repeats (many copies) [PF13637.8, score=39.0]; Ankyrin repeat [PF13606.8, score=33.4]; Ankyrin repeats (many copies) [PF13857.8, score=33.4]; Fungal protein kinase [PF17667.3, score=24.7]; Caspase domain [PF00656.24, score=22.9]; ABC1 atypical kinase-like domain [PF03109.18, score=18.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=123, Expect=6e-29]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=124, Expect=3e-29]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=108, Expect=1e-23]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [Score=103, Expect=2e-22]} {Smed: dd_Smed_v6_7408_0_1, dd_Smed_v6_7408_0_1, [Score=116, Expect=7e-27]} {RNA1509_37841} {RNA1310_4442, RNA1509_37841} {RNA1509_37841, RNA815_11696}
18. MligTC455_36164 663 13.8 Mlig455_022542, Mlig455_063673

Neo: -

Age: Down-Up-Down

 AC129492.3 0.957 - - - 0.957 - -

Mlig455_022542 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=42.2]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=40.8, Expect=1e-05]} {RNA1509_35284} {RNA1310_53993} {RNA815_28259.1}

Mlig455_063673 {REF} {Length: 2989} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=102.7]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=4e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=67.0, Expect=6e-15]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.4, Expect=9e-15]; ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.6, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=76.3, Expect=5e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=66.2, Expect=3e-15]} {RNA1509_35284} {RNA1310_53993, RNA1509_35284} {RNA1509_35284, RNA815_28259.1}
19. MligTC455_50011 1010 21.05 Mlig455_029568

Neo: -

Age: logFC(26M/2M)=-0.442

Region-specific R7: 4.083

Region-enriched R7: 3.957/0.00000
Region-enriched R8: 2.986/0.00000

Regeneration-downregulated BL: -2.893

Regeneration-depleted BL: -2.893

 SLC17A6 0.956 - - - - - 0.956 Mlig455_029568 {REF} {Length: 1751} {Pfam: Major Facilitator Superfamily [PF07690.18, score=139.7]; Sugar (and other) transporter [PF00083.26, score=18.6]; BT1 family [PF03092.18, score=17.8]} {Human: ENSG00000091664, SLC17A6, solute carrier family 17 member 6, [Score=298, Expect=2e-95]; ENSG00000104888, SLC17A7, solute carrier family 17 member 7, [Score=293, Expect=8e-94]; ENSG00000179520, SLC17A8, solute carrier family 17 member 8, [Score=285, Expect=3e-90]} {Mouse: ENSMUSG00000030500, Slc17a6, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6, [Score=298, Expect=1e-95]; ENSMUSG00000070570, Slc17a7, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7, [Score=294, Expect=7e-94]} {Dmel: FBgn0031424, VGlut, Vesicular glutamate transporter, [Score=250, Expect=6e-77]} {Celegans: WBGene00001135, eat-4, Probable vesicular glutamate transporter eat-4, [Score=242, Expect=1e-74]} {Smed: dd_Smed_v6_13219_0_1, dd_Smed_v6_13219_0_1, [Score=379, Expect=2e-128]} {RNA1509_13439} {RNA1310_2093.1} {RNA815_3820.1}
20. MligTC455_40333 129 2.68 Mlig455_060618

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=2.604

 0.954 - - - 0.954 - - Mlig455_060618 {REF} {Length: 1071} {RNA1509_15938} {RNA1310_60401} {RNA815_36308}
21. MligTC455_24899 46 0.96 Mlig455_061325, Mlig455_061327, Mlig455_062677

Neo: -

Age: -

Region-enriched R2: 6.235/0.01647

 0.951 - - - 0.951 - -

Mlig455_061325 {REF} {Length: 1675} {RNA1310_57697}

Mlig455_061327 {REF} {Length: 744} {RNA1310_57697}

Mlig455_062677 {REF} {Length: 1745} {RNA1310_57697}
22. MligTC455_53397 668 13.92 Mlig455_043199

Neo: -

Age: -

Region-enriched R7: 3.654/0.00000
Region-enriched R6: 1.995/0.01898

 PRR9 0.951 - - - - - 0.951 Mlig455_043199 {REF} {Length: 2440} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=1e-05]} {RNA1509_19815} {RNA1310_7345} {RNA815_2474}
23. MligTC455_22786 673 14.02 Mlig455_026980, Mlig455_030714

Neo: -

Age: -

 PCBP3 0.95 - - - - 0.950 -

Mlig455_026980 {REF} {Length: 4441} {Pfam: KH domain [PF00013.31, score=173.6]; KH domain [PF07650.19, score=54.2]; KH domain [PF13083.8, score=32.1]; KH-like RNA-binding domain [PF16005.7, score=24.8]} {Human: ENSG00000183570, PCBP3, poly(rC) binding protein 3, [Score=311, Expect=5e-100]} {Mouse: ENSMUSG00000001120, Pcbp3, poly(rC) binding protein 3, [RH, Score=234, Expect=8e-73]; ENSMUSG00000056851, Pcbp2, poly(rC) binding protein 2, [RH, Score=229, Expect=3e-70]} {Dmel: FBgn0262737, mub, mushroom-body expressed, [Score=211, Expect=2e-62]} {Celegans: WBGene00003978, pes-4, Patterned Expression Site, [RH, Score=233, Expect=6e-70]} {Smed: dd_Smed_v6_8431_0_1, dd_Smed_v6_8431_0_1, [Score=270, Expect=7e-83]} {RNA1509_19682} {RNA1310_2287.1, RNA1509_19682} {RNA1509_19682, RNA815_8711.1}

Mlig455_030714 {REF} {Length: 4400} {Pfam: KH domain [PF00013.31, score=173.6]; KH domain [PF07650.19, score=54.3]; KH domain [PF13083.8, score=32.1]; KH-like RNA-binding domain [PF16005.7, score=24.8]} {Human: ENSG00000183570, PCBP3, poly(rC) binding protein 3, [Score=310, Expect=9e-100]} {Mouse: ENSMUSG00000001120, Pcbp3, poly(rC) binding protein 3, [RH, Score=234, Expect=7e-73]; ENSMUSG00000056851, Pcbp2, poly(rC) binding protein 2, [RH, Score=228, Expect=3e-70]} {Dmel: FBgn0262737, mub, mushroom-body expressed, [Score=211, Expect=3e-62]} {Celegans: WBGene00003978, pes-4, Patterned Expression Site, [RH, Score=233, Expect=6e-70]} {Smed: dd_Smed_v6_8431_0_1, dd_Smed_v6_8431_0_1, [Score=270, Expect=5e-83]} {RNA1509_19682} {RNA1310_6582} {RNA815_9331}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA