Data search
Results for MligTC455_36164
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36164 | 663 | 13.80 | Mlig455_022542, Mlig455_063673 | Neo: - Age: Down-Up-Down |
AC129492.3 | Mlig455_022542 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=42.2]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=40.8, Expect=1e-05]} {RNA1509_35284} {RNA1310_53993} {RNA815_28259.1} Mlig455_063673 {REF} {Length: 2989} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=102.7]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=4e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=67.0, Expect=6e-15]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.4, Expect=9e-15]; ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.6, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=76.3, Expect=5e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=66.2, Expect=3e-15]} {RNA1509_35284} {RNA1310_53993, RNA1509_35284} {RNA1509_35284, RNA815_28259.1} |
Cumulative graph for MligTC455_36164
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.75 | 4.049 | 0.00927 | 0.28337 | |
| RegionR2 | 1.906 | 4.049 | 0.00626 | 0.07444 | |
| RegionR3 | 0.988 | 4.049 | 0.19351 | 0.73103 | |
| RegionR4 | 0.559 | 4.049 | 0.53909 | 0.86178 | |
| RegionR5 | 1.093 | 4.049 | 0.12729 | 0.36073 | |
| RegionR6 | 0.945 | 4.049 | 0.23322 | 0.81742 | |
| RegionR7 | 0.88 | 4.049 | 0.31822 | 0.95309 | |
| RegionR8 | 1.379 | 4.049 | 0.09652 | 0.58637 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.145 | 4.049 | 1.00000 | 1.00000 | |
| RegenerationR2 | -0.223 | 4.049 | 0.58455 | 0.90861 | |
| RegenerationR3 | 0.523 | 4.049 | 0.28610 | 0.71816 | |
| RegenerationR4 | 0.392 | 4.049 | 0.45087 | 0.84252 | |
| RegenerationR5 | 0.265 | 4.049 | 0.55946 | 0.89074 | |
| RegenerationR6 | -0.198 | 4.049 | 0.69863 | 0.92372 | |
| RegenerationBL | -0.681 | 4.049 | 0.23777 | 0.59112 | |
| RegenerationTP | 0.497 | 4.049 | 0.35226 | 0.79373 |
Genes with expression patterns similar to MligTC455_36164
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36164 | 663 | 13.8 | Mlig455_022542, Mlig455_063673 | Neo: - Age: Down-Up-Down |
AC129492.3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_022542 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=42.2]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=40.8, Expect=1e-05]} {RNA1509_35284} {RNA1310_53993} {RNA815_28259.1} Mlig455_063673 {REF} {Length: 2989} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=102.7]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=4e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=67.0, Expect=6e-15]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.4, Expect=9e-15]; ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.6, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=76.3, Expect=5e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=66.2, Expect=3e-15]} {RNA1509_35284} {RNA1310_53993, RNA1509_35284} {RNA1509_35284, RNA815_28259.1} |
| 2. | MligTC455_46566 | 167 | 3.47 | Mlig455_030556 | Neo: - Age: - Region-enriched R2: 2.352/0.01128 |
1.717 | - | - | - | 0.953 | - | 0.764 | Mlig455_030556 {REF} {Length: 2003} {Smed: dd_Smed_v6_3795_0_1, dd_Smed_v6_3795_0_1, [Score=86.7, Expect=8e-19]} {RNA1509_3114} {RNA1310_34234} {RNA815_19594} | |
| 3. | MligTC455_08864 | 295 | 6.14 | Mlig455_035002 | Neo: - Age: - |
ALS2 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_035002 {REF} {Length: 7545} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=305, Expect=2e-83]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=313, Expect=4e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=88.2, Expect=6e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=74.7, Expect=4e-13]} {RNA1509_6929} {RNA1310_334.1} {RNA815_1754} |
| 4. | MligTC455_37104 | 146 | 3.05 | Mlig455_026653, Mlig455_039048, Mlig455_052213 | Neo: - Age: - |
0.966 | - | - | - | 0.966 | - | - | Mlig455_026653 {REF} {Length: 2643} {Pfam: Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase [PF18371.3, score=23.2]} {RNA1509_49031} {RNA1310_34323} {RNA815_33771.1} Mlig455_039048 {REF} {Length: 1239} {Pfam: Chordin-like protein 1/2 C-terminal [PF19548.1, score=23.1]} {RNA1509_49031} {RNA1310_23076.1} {RNA815_54937} Mlig455_052213 {REF} {Length: 593} {RNA1509_49031} {RNA1310_97783} {RNA815_54937} |
|
| 5. | MligTC455_33072 | 230 | 4.8 | Mlig455_052654 | Neo: - Age: - Region-enriched R3: 2.742/0.03551 |
0.964 | - | - | - | 0.964 | - | - | Mlig455_052654 {REF} {Length: 650} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57498} {RNA1310_24453.3} {RNA815_11507} | |
| 6. | MligTC455_29580 | 523 | 10.89 | Mlig455_004620, Mlig455_004629, Mlig455_004656 | Neo: - Age: - Region-enriched R8: 2.467/0.03081 |
AP1S2 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_004620 {REF} {Length: 2855} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=261, Expect=2e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=252, Expect=5e-87]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=261, Expect=1e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=252, Expect=3e-87]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=282, Expect=3e-99]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [RH, Score=278, Expect=9e-98]} {Smed: dd_Smed_v6_2365_0_1, dd_Smed_v6_2365_0_1, [RH, Score=274, Expect=5e-96]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_4627} Mlig455_004629 {REF} {Length: 2802} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=269, Expect=2e-93]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=3e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=269, Expect=1e-93]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=2e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=4e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=1e-88]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=262, Expect=3e-91]} {RNA1509_14918} {RNA1310_4459.1} {RNA815_3355.1} Mlig455_004656 {REF} {Length: 1887} {TRANSSPLICED} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=193.6]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=270, Expect=7e-94]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=263, Expect=6e-91]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=270, Expect=5e-94]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=263, Expect=4e-91]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [RH, Score=262, Expect=3e-91]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=256, Expect=8e-89]} {Smed: dd_Smed_v6_9393_0_2, dd_Smed_v6_9393_0_2, [RH, Score=263, Expect=1e-91]} {RNA1509_14918} {RNA1310_7376.1} {RNA815_4627} |
| 7. | MligTC455_18513 | 379 | 7.9 | Mlig455_037306 | Neo: - Age: - |
CALM2 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_037306 {REF} {Length: 2151} {Pfam: EF hand [PF00036.34, score=110.6]; EF-hand domain pair [PF13499.8, score=108.5]; EF-hand domain [PF13405.8, score=88.7]; EF-hand domain pair [PF13833.8, score=86.3]; EF hand [PF13202.8, score=86.0]; EF-hand domain [PF14658.8, score=46.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=34.6]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=182, Expect=1e-58]; ENSG00000198668, CALM1, calmodulin 1, [Score=182, Expect=1e-58]; ENSG00000160014, CALM3, calmodulin 3, [Score=182, Expect=1e-58]; ENSG00000178363, CALML3, calmodulin like 3, [Score=177, Expect=6e-57]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=184, Expect=4e-59]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=182, Expect=7e-59]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=182, Expect=7e-59]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=181, Expect=2e-58]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=180, Expect=2e-58]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=179, Expect=3e-58]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=179, Expect=2e-58]} {RNA1509_20574} {RNA1310_23382} {RNA815_12969} |
| 8. | MligTC455_19136 | 253 | 5.27 | Mlig455_044611 | Neo: Irradiation Age: - |
LARS2 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_044611 {REF} {Length: 3788} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=104.1]; tRNA synthetases class I (M) [PF09334.13, score=67.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=20.0]} {Human: ENSG00000011376, LARS2, leucyl-tRNA synthetase 2, mitochondrial, [RH, Score=504, Expect=2e-166]} {Mouse: ENSMUSG00000035202, Lars2, leucyl-tRNA synthetase, mitochondrial, [RH, Score=498, Expect=2e-164]} {Dmel: FBgn0027085, LeuRS-m, Leucyl-tRNA synthetase, mitochondrial, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00003074, lars-2, Leucyl Amino-acyl tRNA Synthetase, [RH, Score=391, Expect=4e-124]} {Smed: dd_Smed_v6_9705_0_1, dd_Smed_v6_9705_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_22638} {RNA1310_5139.1} {RNA815_10970} |
| 9. | MligTC455_19179 | 442 | 9.21 | Mlig455_059343 | Neo: - Age: Up-Down-Up |
0.956 | - | - | - | 0.956 | - | - | Mlig455_059343 {REF} {Length: 1621} {Smed: dd_Smed_v6_5147_0_1, dd_Smed_v6_5147_0_1, [RH, Score=62.8, Expect=2e-11]} {RNA1509_38428} {RNA1310_38164} {RNA815_17603} | |
| 10. | MligTC455_08863 | 142 | 2.96 | Mlig455_013970 | Neo: Irradiation Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_013970 {REF} {Length: 1055} {NoTransDecoderORF} {RNA1509_28501} {RNA1310_334.1} {RNA815_30547} | |
| 11. | MligTC455_12584 | 65 | 1.36 | Mlig455_042480 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_042480 {REF} {Length: 1781} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=50.5]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=25.3]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.9]} {Smed: dd_Smed_v6_2982_0_2, dd_Smed_v6_2982_0_2, [Score=85.9, Expect=3e-19]} {RNA1310_18640} {RNA815_40716} | |
| 12. | MligTC455_27826 | 3365 | 70.11 | Mlig455_012369 | Neo: - Age: logFC(26M/2M)=-0.363 Region-specific R2: 3.166 Region-enriched R8: 2.483/0.00000 Regeneration-depleted BL: -1.955 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_012369 {REF} {Length: 1066} {Pfam: Domain of unknown function (DUF4905) [PF16248.7, score=18.4]} {RNA1509_28537, RNA1509_7615} {RNA1310_59305, RNA1509_28537, RNA1509_7615} {RNA1509_28537, RNA1509_7615, RNA815_42608} | |
| 13. | MligTC455_52569 | 656 | 13.66 | Mlig455_037578, Mlig455_037634 | Neo: - Age: logFC(26M/2M)=-0.414 |
0.952 | 0.952 | - | - | - | - | - | Mlig455_037578 {REF} {Length: 1644} {RNA1509_53547} {RNA1310_24704, RNA1509_53547} {RNA1509_53547, RNA815_11793} Mlig455_037634 {REF} {Length: 1597} {RNA1509_53547} {RNA1310_24704} {RNA815_11793} |
|
| 14. | MligTC455_19180 | 732 | 15.25 | Mlig455_065589 | Neo: - Age: - Region-enriched R8: 1.853/0.01583 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_065589 {REF} {Length: 1480} {Smed: dd_Smed_v6_5147_0_1, dd_Smed_v6_5147_0_1, [RH, Score=62.0, Expect=4e-11]} {RNA1509_38428} {RNA1310_38164} {RNA815_17603} |