Data search


search
Exact
Search

Results for MligTC455_18733

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18733 252 5.25 Mlig455_005579

Neo: Int S/G2/M

Age: -

SENP7 Mlig455_005579 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=128.8]} {Human: ENSG00000138468, SENP7, SUMO specific peptidase 7, [Score=203, Expect=8e-54]} {Mouse: ENSMUSG00000052917, Senp7, SUMO1/sentrin specific peptidase 7, [RH, Score=207, Expect=3e-55]} {Dmel: FBgn0035713, velo, veloren, [RH, Score=195, Expect=2e-52]} {Celegans: WBGene00006737, ulp-2, Ubiquitin-like protease 2, [Score=83.6, Expect=2e-16]} {Smed: dd_Smed_v6_11853_0_1, dd_Smed_v6_11853_0_1, [Score=281, Expect=1e-81]} {RNA1509_42487, RNA1509_44335} {RNA1310_5169, RNA1509_42487, RNA1509_44335} {RNA1509_42487, RNA1509_44335, RNA815_2599.1}

Cumulative graph for MligTC455_18733

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.868 2.954 0.03104 0.44893
RegionR2 2.057 2.954 0.04973 0.26585
RegionR3 2.071 2.954 0.01505 0.19763
RegionR4 0.744 2.954 0.44199 0.77054
RegionR5 1.27 2.954 0.15350 0.40947
RegionR6 2.21 2.954 0.00857 0.15275
RegionR7 0.139 2.954 0.82134 1.00000
RegionR8 -0.623 2.954 0.96970 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.981 2.954 0.99988 1.00000
RegenerationR2 0.88 2.954 0.12528 0.54776
RegenerationR3 0.709 2.954 0.25843 0.69265
RegenerationR4 1.156 2.954 0.07580 0.43785
RegenerationR5 0.977 2.954 0.09296 0.46717
RegenerationR6 1.168 2.954 0.05231 0.28663
RegenerationBL 1.11 2.954 0.22346 0.57236
RegenerationTP 2.18 2.954 0.03255 0.30235


Genes with expression patterns similar to MligTC455_18733

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18733 252 5.25 Mlig455_005579

Neo: Int S/G2/M

Age: -

SENP7 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_005579 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Ulp1 protease family, C-terminal catalytic domain [PF02902.21, score=128.8]} {Human: ENSG00000138468, SENP7, SUMO specific peptidase 7, [Score=203, Expect=8e-54]} {Mouse: ENSMUSG00000052917, Senp7, SUMO1/sentrin specific peptidase 7, [RH, Score=207, Expect=3e-55]} {Dmel: FBgn0035713, velo, veloren, [RH, Score=195, Expect=2e-52]} {Celegans: WBGene00006737, ulp-2, Ubiquitin-like protease 2, [Score=83.6, Expect=2e-16]} {Smed: dd_Smed_v6_11853_0_1, dd_Smed_v6_11853_0_1, [Score=281, Expect=1e-81]} {RNA1509_42487, RNA1509_44335} {RNA1310_5169, RNA1509_42487, RNA1509_44335} {RNA1509_42487, RNA1509_44335, RNA815_2599.1}
2. MligTC455_35624 515 10.72 Mlig455_004638

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_004638 {REF} {Length: 1137} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15717, RNA1509_47959} {RNA1310_38256, RNA1509_47959} {RNA1509_47959, RNA815_20822}
3. MligTC455_03622 103 2.15 Mlig455_006088

Neo: -

Age: -

0.96 - - - - - 0.960 Mlig455_006088 {REF} {Length: 1012} {NoTransDecoderORF} {RNA1509_45927} {RNA1310_55422.1} {RNA815_28217}
4. MligTC455_47360 146 3.04 Mlig455_010859

Neo: -

Age: logFC(26M/2M)=-0.662

ECI1 0.957 0.957 - - - - - Mlig455_010859 {REF} {Length: 2083} {TRANSSPLICED} {Pfam: Enoyl-CoA hydratase/isomerase [PF00378.22, score=83.1]; Enoyl-CoA hydratase/isomerase [PF16113.7, score=20.5]} {Human: ENSG00000167969, ECI1, enoyl-CoA delta isomerase 1, [Score=67.4, Expect=5e-12]} {Mouse: ENSMUSG00000024132, Eci1, enoyl-Coenzyme A delta isomerase 1, [Score=67.0, Expect=6e-12]} {Dmel: FBgn0032161, CG4594, [Score=67.8, Expect=3e-12]} {RNA1509_13854} {RNA1310_19425.1} {RNA815_17367}
5. MligTC455_51398 351 7.32 Mlig455_000583

Neo: -

Age: -

KCNT1 0.957 - - - - - 0.957 Mlig455_000583 {REF} {Length: 4688} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=91.5]; Ion channel [PF07885.18, score=43.5]} {Human: ENSG00000107147, KCNT1, potassium sodium-activated channel subfamily T member 1, [RH, Score=1147, Expect=0.0]; ENSG00000162687, KCNT2, potassium sodium-activated channel subfamily T member 2, [RH, Score=1132, Expect=0.0]} {Mouse: ENSMUSG00000052726, Kcnt2, potassium channel, subfamily T, member 2, [RH, Score=1132, Expect=0.0]; ENSMUSG00000058740, Kcnt1, potassium channel, subfamily T, member 1, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0261698, SLO2, slowpoke 2, [RH, Score=838, Expect=0.0]} {Celegans: WBGene00004831, slo-2, SLO-2 potassium channel; SLOwpoke potassium channel family, [RH, Score=848, Expect=0.0]} {Smed: dd_Smed_v6_9739_0_1, dd_Smed_v6_9739_0_1, [RH, Score=1364, Expect=0.0]} {RNA1509_10851} {RNA1310_11341} {RNA815_3987}
6. MligTC455_39039 274 5.7 Mlig455_026563

Neo: -

Age: -

Region-enriched R5: 1.645/0.03505

LAMTOR1 0.956 0.956 - - - - - Mlig455_026563 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=20.2]} {Human: ENSG00000149357, LAMTOR1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=45.4, Expect=9e-06]} {Mouse: ENSMUSG00000030842, Lamtor1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=48.1, Expect=7e-07]} {RNA1509_34492} {RNA1310_43726.1, RNA1509_34492} {RNA1509_34492, RNA815_11657.1}
7. MligTC455_15389 145 3.02 Mlig455_050920

Neo: -

Age: Up-Down-Down

SLC26A11 0.955 0.955 - - - - - Mlig455_050920 {REF} {Length: 4277} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=307.6]; STAS domain [PF01740.23, score=35.5]} {Human: ENSG00000181045, SLC26A11, solute carrier family 26 member 11, [Score=384, Expect=3e-126]} {Mouse: ENSMUSG00000039908, Slc26a11, solute carrier family 26, member 11, [RH, Score=389, Expect=2e-128]} {Dmel: FBgn0013953, Esp, Epidermal stripes and patches, [Score=305, Expect=3e-95]} {Celegans: WBGene00010789, sulp-5, SULfate Permease family, [Score=161, Expect=5e-42]} {Smed: dd_Smed_v6_7104_0_1, dd_Smed_v6_7104_0_1, [Score=372, Expect=3e-122]} {RNA1509_16136} {RNA1310_7632.2} {RNA815_4171}
8. MligTC455_09083 120 2.5 Mlig455_007600

Neo: -

Age: Up-Down-Up

0.954 0.954 - - - - - Mlig455_007600 {REF} {Length: 2593} {RNA1509_29618} {RNA1310_46079} {RNA815_50544}
9. MligTC455_50025 312 6.51 Mlig455_041593

Neo: -

Age: -

Region-enriched R4: 2.535/0.01468

ATF7IP 0.952 - - - - - 0.952 Mlig455_041593 {REF} {Length: 4601} {TRANSSPLICED} {Pfam: Fibronectin-III type domain [PF16794.7, score=92.7]} {Human: ENSG00000171681, ATF7IP, activating transcription factor 7 interacting protein, [RH, Score=103, Expect=8e-22]} {Mouse: ENSMUSG00000030213, Atf7ip, activating transcription factor 7 interacting protein, [RH, Score=101, Expect=2e-21]} {Dmel: FBgn0027499, wde, windei, [RH, Score=90.9, Expect=4e-18]} {Smed: dd_Smed_v6_9372_0_1, dd_Smed_v6_9372_0_1, [RH, Score=76.6, Expect=1e-14]} {RNA1509_10271} {RNA1310_5928.1} {RNA815_4314.1}
10. MligTC455_42282 52 1.08 Mlig455_011397

Neo: -

Age: -

0.951 0.951 - - - - - Mlig455_011397 {REF} {Length: 893} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4604) [PF15377.8, score=44.9]} {Smed: dd_Smed_v6_8241_0_1, dd_Smed_v6_8241_0_1, [RH, Score=46.6, Expect=1e-06]} {RNA1310_36898.1} {RNA815_23245}
11. MligTC455_13387 96 2 Mlig455_030047

Neo: -

Age: Down-Up-Down

TRPT1 0.95 0.950 - - - - - Mlig455_030047 {REF} {Length: 2749} {Pfam: RNA 2'-phosphotransferase, Tpt1 / KptA family [PF01885.18, score=188.2]} {Human: ENSG00000149743, TRPT1, tRNA phosphotransferase 1, [Score=157, Expect=4e-47]} {Mouse: ENSMUSG00000047656, Trpt1, tRNA phosphotransferase 1, [Score=151, Expect=4e-45]} {Dmel: FBgn0053057, CG33057, [RH, Score=149, Expect=9e-45]} {Smed: dd_Smed_v6_5292_0_2, dd_Smed_v6_5292_0_2, [Score=142, Expect=1e-41]} {RNA1509_34325} {RNA1310_32352} {RNA815_14968}
12. MligTC455_34923 61 1.28 Mlig455_036365

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_036365 {REF} {Length: 4040} {NoTransDecoderORF} {RNA1509_49304} {RNA1310_340.1} {RNA815_1857}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA