Data search
Results for MligTC455_18835
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18835 | 592 | 12.33 | Mlig455_002968 | Neo: - Age: - Region-enriched R4: 2.400/0.00403 |
Mlig455_002968 {REF} {Length: 4025} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.5]} {Dmel: FBgn0261649, tinc, tincar, [Score=100, Expect=4e-21]} {Celegans: WBGene00044698, K09F5.6, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=189, Expect=3e-50]} {RNA1509_15636} {RNA1310_23824.1, RNA1509_15636} {RNA1509_15636, RNA815_17607} |
Cumulative graph for MligTC455_18835
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -6.181 | 3.902 | 0.10484 | 0.67959 | |
| RegionR2 | 0.599 | 3.902 | 0.48649 | 0.86935 | |
| RegionR3 | 0.335 | 3.902 | 0.67483 | 1.00000 | |
| RegionR4 | 2.4 | 3.902 | 0.00030 | 0.00403 | |
| RegionR5 | -0.205 | 3.902 | 0.90752 | 1.00000 | |
| RegionR6 | 0.874 | 3.902 | 0.24880 | 0.83486 | |
| RegionR7 | 0.672 | 3.902 | 0.46403 | 1.00000 | |
| RegionR8 | 1.507 | 3.902 | 0.07303 | 0.51662 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 6.528 | 3.902 | 0.11392 | 0.83847 | |
| RegenerationR2 | -0.562 | 3.902 | 0.12077 | 0.54033 | |
| RegenerationR3 | -0.289 | 3.902 | 0.50576 | 0.85901 | |
| RegenerationR4 | -0.931 | 3.902 | 0.03546 | 0.30401 | |
| RegenerationR5 | 0.6 | 3.902 | 0.18435 | 0.61451 | |
| RegenerationR6 | -0.199 | 3.902 | 0.63984 | 0.89325 | |
| RegenerationBL | 0.3 | 3.902 | 0.51538 | 0.87856 | |
| RegenerationTP | -0.336 | 3.902 | 0.52022 | 0.91428 |
Genes with expression patterns similar to MligTC455_18835
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18835 | 592 | 12.33 | Mlig455_002968 | Neo: - Age: - Region-enriched R4: 2.400/0.00403 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002968 {REF} {Length: 4025} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.5]} {Dmel: FBgn0261649, tinc, tincar, [Score=100, Expect=4e-21]} {Celegans: WBGene00044698, K09F5.6, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=189, Expect=3e-50]} {RNA1509_15636} {RNA1310_23824.1, RNA1509_15636} {RNA1509_15636, RNA815_17607} | |
| 2. | MligTC455_27122 | 1937 | 40.35 | Mlig455_036943 | Neo: - Age: logFC(26M/2M)=-0.328 |
1.791 | - | - | 0.817 | - | - | 0.974 | Mlig455_036943 {REF} {Length: 2654} {RNA1509_51779, RNA1509_58276} {RNA1310_29995.1, RNA1509_51779} {RNA1509_51779, RNA815_9865} | |
| 3. | MligTC455_11576 | 215 | 4.49 | Mlig455_045740 | Neo: - Age: - |
1.723 | 0.770 | - | - | 0.953 | - | - | Mlig455_045740 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1} | |
| 4. | MligTC455_22331 | 559 | 11.64 | Mlig455_051905 | Neo: - Age: logFC(26M/2M)=-0.323 Regeneration-upregulated BL: 1.773 Regeneration-enriched BL: 1.773 |
TRPM3 | 0.977 | - | - | - | 0.977 | - | - | Mlig455_051905 {REF} {Length: 4160} {Pfam: Ion transport protein [PF00520.33, score=53.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=125, Expect=6e-29]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=125, Expect=3e-29]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00000425, ced-11, [RH, Score=60.5, Expect=3e-09]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=214, Expect=7e-59]} {RNA1509_4234, RNA1509_53275} {RNA1310_2153, RNA1509_53275} {RNA1509_53275, RNA815_602} |
| 5. | MligTC455_41531 | 265 | 5.52 | Mlig455_024141 | Neo: - Age: Down-Up-Down |
0.962 | - | - | - | 0.962 | - | - | Mlig455_024141 {REF} {Length: 1792} {TRANSSPLICED} {RNA1509_26233} {RNA1310_18244.1, RNA1509_26233} {RNA1509_26233, RNA815_13656.1} | |
| 6. | MligTC455_46483 | 630 | 13.12 | Mlig455_013942 | Neo: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_013942 {REF} {Length: 3052} {RNA1509_5335} {RNA1310_5801.1, RNA1509_5335} {RNA1509_5335, RNA815_10251} | |
| 7. | MligTC455_54188 | 1224 | 25.51 | Mlig455_011257, Mlig455_011337, Mlig455_011343 | Neo: - Age: logFC(26M/2M)=-0.405 Region-enriched R2: 1.704/0.00045 |
TRPM3 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_011257 {REF} {Length: 4016} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=57.4]; Ankyrin repeats (many copies) [PF13637.8, score=35.7]; Ankyrin repeat [PF13606.8, score=29.0]; Ankyrin repeats (many copies) [PF13857.8, score=19.6]} {RNA1509_6328} {RNA1310_1706} {RNA815_498} Mlig455_011337 {REF} {Length: 4535} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=67.0]; Ankyrin repeats (many copies) [PF13637.8, score=42.0]; Ankyrin repeats (many copies) [PF13857.8, score=34.0]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=85.5, Expect=5e-16]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=83.6, Expect=2e-15]; ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=81.3, Expect=1e-14]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=87.0, Expect=1e-16]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=86.3, Expect=2e-16]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=77.0, Expect=1e-13]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=68.9, Expect=2e-11]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=102, Expect=6e-22]} {RNA1509_6328} {RNA1310_1706, RNA1509_6328} {RNA1509_6328, RNA815_498} Mlig455_011343 {REF} {Length: 5711} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=61.4]; Ankyrin repeats (many copies) [PF13637.8, score=46.8]; Ankyrin repeat [PF00023.32, score=23.9]; Ankyrin repeat [PF13606.8, score=20.5]; Ankyrin repeats (many copies) [PF13857.8, score=20.1]} {RNA1509_6328} {RNA1310_1706} {RNA815_498} |