M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_11576

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_11576 215 4.49 Mlig455_045740

Neo: -

Age: -

 Mlig455_045740 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}

Cumulative graph for MligTC455_11576

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.886 2.571 0.30760 0.95663
RegionR2 0.163 2.571 0.79603 1.00000
RegionR3 0.113 2.571 0.81111 1.00000
RegionR4 1.057 2.571 0.32003 0.63673
RegionR5 -0.286 2.571 0.92506 1.00000
RegionR6 -0.049 2.571 0.86912 1.00000
RegionR7 1.602 2.571 0.08705 0.56731
RegionR8 2.286 2.571 0.01488 0.23774

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.247 2.571 0.99998 1.00000
RegenerationR2 0.452 2.571 0.49896 0.87110
RegenerationR3 -0.28 2.571 0.72356 0.95567
RegenerationR4 -1.215 2.571 0.13609 0.55609
RegenerationR5 0.154 2.571 0.84216 1.00000
RegenerationR6 0.707 2.571 0.35125 0.69638
RegenerationBL 0.444 2.571 0.54527 0.90315
RegenerationTP -3.122 2.571 0.00278 0.08639


Genes with expression patterns similar to MligTC455_11576

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_11576 215 4.49 Mlig455_045740

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045740 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}
2. MligTC455_38572 208 4.33 Mlig455_060781

Neo: -

Age: -

 TTC30B 2.52 0.793 - - 0.958 - 0.769 Mlig455_060781 {REF} {Length: 3017} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF14559.8, score=61.6]; Tetratricopeptide repeat [PF07719.19, score=57.2]; Tetratricopeptide repeat [PF13424.8, score=41.4]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=40.1]; Tetratricopeptide repeat [PF00515.30, score=38.6]; Tetratricopeptide repeat [PF13432.8, score=35.4]; Tetratricopeptide repeat [PF13428.8, score=30.0]; TPR repeat [PF13414.8, score=26.7]; Tetratricopeptide repeat [PF13174.8, score=24.4]; Tetratricopeptide repeat [PF13176.8, score=22.7]; Tetratricopeptide repeat [PF13181.8, score=20.9]; Tetratricopeptide repeat [PF13371.8, score=19.0]; Tetratricopeptide repeat [PF13374.8, score=19.0]} {Human: ENSG00000196659, TTC30B, tetratricopeptide repeat domain 30B, [RH, Score=863, Expect=0.0]; ENSG00000197557, TTC30A, tetratricopeptide repeat domain 30A, [RH, Score=854, Expect=0.0]} {Mouse: ENSMUSG00000075271, Ttc30a1, tetratricopeptide repeat domain 30A1, [RH, Score=863, Expect=0.0]; ENSMUSG00000075273, Ttc30b, tetratricopeptide repeat domain 30B, [RH, Score=859, Expect=0.0]; ENSMUSG00000075272, Ttc30a2, tetratricopeptide repeat domain 30A2, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0032470, CG5142, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001117, dyf-1, Tetratricopeptide repeat protein 30 homolog, [RH, Score=582, Expect=0.0]} {Smed: dd_Smed_v6_8798_0_1, dd_Smed_v6_8798_0_1, [RH, Score=971, Expect=0.0]} {RNA1509_15898} {RNA1310_10695, RNA1509_15898} {RNA1509_15898, RNA815_3646.1}
3. MligTC455_18406 313 6.52 Mlig455_007637

Neo: -

Age: -

 SPTBN1 1.829 - - - - 0.848 0.981 Mlig455_007637 {REF} {Length: 13056} {TRANSSPLICED} {Pfam: Spectrin repeat [PF00435.23, score=504.9]; Calponin homology (CH) domain [PF00307.33, score=109.7]; SH3 domain [PF00018.30, score=32.9]; Variant SH3 domain [PF14604.8, score=32.1]; PH domain [PF00169.31, score=28.7]; CAMSAP CH domain [PF11971.10, score=24.6]} {Human: ENSG00000115306, SPTBN1, spectrin beta, non-erythrocytic 1, [Score=433, Expect=3e-121]} {Mouse: ENSMUSG00000020315, Sptbn1, spectrin beta, non-erythrocytic 1, [Score=434, Expect=6e-122]} {Dmel: FBgn0250788, beta-Spec, beta Spectrin, [Score=405, Expect=4e-113]} {Celegans: WBGene00004855, sma-1, Beta chain spectrin homolog Sma1; SMAll, [RH, Score=467, Expect=3e-131]} {Smed: dd_Smed_v6_2514_0_1, dd_Smed_v6_2514_0_1, [RH, Score=960, Expect=0.0]} {RNA1509_3604} {RNA1310_57.1} {RNA815_21.1}
4. MligTC455_20133 614 12.79 Mlig455_033844

Neo: -

Age: -

 ADAM10 1.773 - - - 0.952 - 0.821 Mlig455_033844 {REF} {Length: 4108} {TRANSSPLICED} {Pfam: Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=114.0]; Metallo-peptidase family M12 [PF13688.8, score=91.7]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=69.0]; Disintegrin [PF00200.25, score=52.8]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=32.9]; Reprolysin family propeptide [PF01562.21, score=23.5]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=22.7]} {Human: ENSG00000137845, ADAM10, ADAM metallopeptidase domain 10, [Score=423, Expect=4e-136]} {Mouse: ENSMUSG00000054693, Adam10, a disintegrin and metallopeptidase domain 10, [Score=414, Expect=1e-132]} {Dmel: FBgn0259984, kuz, kuzbanian, [Score=402, Expect=5e-125]} {Celegans: WBGene00006324, sup-17, ADAM 10; SUPpressor, [Score=420, Expect=3e-133]} {Smed: dd_Smed_v6_2341_0_2, dd_Smed_v6_2341_0_2, [Score=475, Expect=3e-155]} {RNA1509_7004} {RNA1310_3561, RNA1509_7004} {RNA1509_7004, RNA815_3272.1}
5. MligTC455_42682 45 0.93 Mlig455_010400

Neo: -

Age: -

 1.765 - - - - 0.811 0.954 Mlig455_010400 {REF} {Length: 1751} {NoTransDecoderORF} {RNA1509_58929} {RNA1310_128448} {RNA815_10390}
6. MligTC455_18835 592 12.33 Mlig455_002968

Neo: -

Age: -

Region-enriched R4: 2.400/0.00403

 1.723 0.770 - - 0.953 - - Mlig455_002968 {REF} {Length: 4025} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=19.5]} {Dmel: FBgn0261649, tinc, tincar, [Score=100, Expect=4e-21]} {Celegans: WBGene00044698, K09F5.6, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=189, Expect=3e-50]} {RNA1509_15636} {RNA1310_23824.1, RNA1509_15636} {RNA1509_15636, RNA815_17607}
7. MligTC455_40995 39 0.82 Mlig455_050157

Neo: -

Age: -

 1.723 - - - - 0.755 0.968 Mlig455_050157 {REF} {Length: 1486} {NoTransDecoderORF} {RNA1509_60145} {RNA1310_75426} {RNA815_3903.1}
8. MligTC455_51377 64 1.34 Mlig455_018509

Neo: -

Age: -

 GRIN1 1.72 0.768 - - - - 0.952 Mlig455_018509 {REF} {Length: 3239} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.3]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=137, Expect=1e-36]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=137, Expect=8e-37]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=133, Expect=8e-36]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=104, Expect=8e-26]} {Smed: dd_Smed_v6_8187_0_2, dd_Smed_v6_8187_0_2, [Score=217, Expect=4e-67]} {RNA1509_25324} {RNA1310_55098.1} {RNA815_23220.2}
9. MligTC455_28815 32 0.68 Mlig455_010912, Mlig455_020600, Mlig455_039274

Neo: Germline

Age: -

 SETMAR 1.719 - - - - 0.746 0.973

Mlig455_010912 {REF} {Length: 1948} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=34.6]; Homeodomain-like domain [PF13384.8, score=21.2]} {RNA1509_25192} {RNA1310_18261.1} {RNA815_38170}

Mlig455_020600 {REF} {Length: 1740} {Pfam: Homeodomain-like domain [PF13565.8, score=37.8]; Winged helix-turn-helix DNA-binding [PF13412.8, score=33.9]; AsnC-type helix-turn-helix domain [PF13404.8, score=27.3]; IclR helix-turn-helix domain [PF09339.12, score=25.2]; Winged helix-turn helix [PF13551.8, score=20.8]; Homeodomain-like domain [PF13384.8, score=20.2]; Helix-turn-helix domain [PF13936.8, score=19.4]} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119}

Mlig455_039274 {REF} {Length: 3746} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=70.2]; DDE superfamily endonuclease [PF13358.8, score=44.2]; Winged helix-turn-helix DNA-binding [PF13412.8, score=34.6]; Homeodomain-like domain [PF13565.8, score=33.0]; Homeodomain-like domain [PF13384.8, score=28.7]; AsnC-type helix-turn-helix domain [PF13404.8, score=27.1]; HTH domain in Mos1 transposase [PF17906.3, score=26.2]; IclR helix-turn-helix domain [PF09339.12, score=22.2]; Winged helix-turn helix [PF13551.8, score=20.7]; Helix-turn-helix domain [PF13518.8, score=19.0]; Helix-turn-helix domain [PF13936.8, score=18.4]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=166, Expect=1e-45]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [Score=70.5, Expect=5e-15]} {RNA1509_25192} {RNA1310_12769.1} {RNA815_30119}
10. MligTC455_34192 134 2.8 Mlig455_022589

Neo: -

Age: -

 1.684 - - - - 0.733 0.951 Mlig455_022589 {REF} {Length: 1896} {RNA1509_34101} {RNA1310_46799} {RNA815_22648}
11. MligTC455_25287 78 1.62 Mlig455_016988, Mlig455_021241, Mlig455_069255

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-2.192

 FCN2 1.681 - - - - 0.731 0.950

Mlig455_016988 {REF} {Length: 1045} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=147.6]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=141, Expect=1e-39]; ENSG00000136859, ANGPTL2, angiopoietin like 2, [Score=134, Expect=1e-35]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=134, Expect=8e-36]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [RH, Score=133, Expect=1e-36]} {Dmel: FBgn0030163, CG1791, [RH, Score=120, Expect=9e-32]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=105, Expect=2e-25]} {RNA1310_48119} {RNA815_52558}

Mlig455_021241 {REF} {Length: 1723} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=97.3]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=104, Expect=2e-24]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=100, Expect=4e-22]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=102, Expect=8e-24]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=101, Expect=1e-22]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=99.0, Expect=5e-22]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=97.1, Expect=2e-21]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=97.1, Expect=3e-21]} {Dmel: FBgn0030163, CG1791, [Score=97.4, Expect=4e-22]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_12256} {RNA1310_326} {RNA815_351.1}

Mlig455_069255 {REF} {Length: 8909} {RNA1509_33647, RNA1509_36216} {RNA1310_15325.1, RNA1509_33647, RNA1509_36216} {RNA1509_33647, RNA1509_36216, RNA815_10965}
12. MligTC455_30249 100 2.09 Mlig455_009659, Mlig455_048381

Neo: -

Age: -

 1.676 - - 0.706 - - 0.970

Mlig455_009659 {REF} {Length: 3024} {Pfam: Primase C terminal 2 (PriCT-2) [PF08707.13, score=46.3]} {RNA1509_20194} {RNA1310_3607.1} {RNA815_37227}

Mlig455_048381 {REF} {Length: 832} {RNA1509_33034} {RNA1310_614.1} {RNA815_31436}
13. MligTC455_19813 128 2.67 Mlig455_023194

Neo: -

Age: Down-Up-Down

 0.983 - - - - - 0.983 Mlig455_023194 {REF} {Length: 614} {TRANSSPLICED} {RNA1509_45712} {RNA1310_38588.2} {RNA815_23034.1}
14. MligTC455_24100 624 12.99 Mlig455_052265, Mlig455_052352

Neo: -

Age: logFC(26M/2M)=-0.280

 KIF1B 0.979 - - - - 0.979 -

Mlig455_052265 {REF} {Length: 4146} {Pfam: Kinesin motor domain [PF00225.25, score=343.5]; Microtubule binding [PF16796.7, score=64.6]; Kinesin protein 1B [PF12423.10, score=29.9]; FHA domain [PF00498.28, score=26.2]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=23.7]; Kinesin-associated [PF16183.7, score=20.6]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=424, Expect=2e-130]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=419, Expect=5e-125]; ENSG00000137177, KIF13A, kinesin family member 13A, [Score=412, Expect=1e-122]; ENSG00000129250, KIF1C, kinesin family member 1C, [Score=406, Expect=4e-124]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=403, Expect=1e-126]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=570, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=418, Expect=1e-124]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=792, Expect=0.0]} {Smed: dd_Smed_v6_12639_0_1, dd_Smed_v6_12639_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_17530, RNA1509_44663} {RNA1310_2637.2, RNA1509_44663} {RNA1509_44663, RNA815_438}

Mlig455_052352 {REF} {Length: 4226} {Pfam: Kinesin motor domain [PF00225.25, score=343.6]; Microtubule binding [PF16796.7, score=64.6]; Kinesin protein 1B [PF12423.10, score=29.9]; FHA domain [PF00498.28, score=28.5]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=23.7]; Kinesin-associated [PF16183.7, score=20.6]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=428, Expect=4e-128]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=419, Expect=2e-125]; ENSG00000137177, KIF13A, kinesin family member 13A, [Score=414, Expect=4e-123]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=571, Expect=0.0]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=419, Expect=5e-125]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [RH, Score=796, Expect=0.0]} {Smed: dd_Smed_v6_12639_0_1, dd_Smed_v6_12639_0_1, [RH, Score=587, Expect=0.0]} {RNA1509_17530} {RNA1310_2637.2, RNA1509_17530} {RNA1509_17530, RNA815_438}
15. MligTC455_36883 94 1.96 Mlig455_070966

Neo: -

Age: -

 0.972 - - - - - 0.972 Mlig455_070966 {REF} {Length: 3363} {TRANSSPLICED} {RNA1509_39805} {RNA1310_22118.2} {RNA815_10951.2}
16. MligTC455_31781 93 1.93 Mlig455_026364

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_026364 {REF} {Length: 1923} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=22.1]} {RNA1509_23300} {RNA1310_14145.1} {RNA815_3900.1}
17. MligTC455_39230 49 1.01 Mlig455_034092

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_034092 {REF} {Length: 793} {NoTransDecoderORF} {RNA1310_105455}
18. MligTC455_49689 198 4.12 Mlig455_011952

Neo: -

Age: logFC(26M/2M)=0.405

Region-enriched R2: 3.033/0.01796

Regeneration-downregulated R2: -3.568

Regeneration-depleted R2: -3.568

 0.97 - - - - - 0.970 Mlig455_011952 {REF} {Length: 1543} {TRANSSPLICED} {Smed: dd_Smed_v6_8297_0_1, dd_Smed_v6_8297_0_1, [Score=50.8, Expect=1e-08]} {RNA1509_38073, RNA1509_49313} {RNA1310_34998, RNA1509_38073, RNA1509_49313} {RNA1509_38073, RNA1509_49313, RNA815_20391}
19. MligTC455_35879 70 1.45 Mlig455_043343

Neo: -

Age: -

 NR4A3 0.965 - - - - - 0.965 Mlig455_043343 {REF} {Length: 4323} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=109.8]} {Human: ENSG00000119508, NR4A3, nuclear receptor subfamily 4 group A member 3, [RH, Score=168, Expect=1e-44]} {Mouse: ENSMUSG00000023034, Nr4a1, nuclear receptor subfamily 4, group A, member 1, [Score=173, Expect=2e-45]; ENSMUSG00000028341, Nr4a3, nuclear receptor subfamily 4, group A, member 3, [Score=167, Expect=5e-43]} {Dmel: FBgn0014859, Hr38, Hormone receptor-like in 38, [Score=157, Expect=2e-39]} {Celegans: WBGene00003605, nhr-6, Nuclear hormone receptor family member nhr-6, [Score=148, Expect=6e-38]} {Smed: dd_Smed_v6_12229_0_1, dd_Smed_v6_12229_0_1, [Score=236, Expect=5e-66]} {RNA1509_34082, RNA1509_57832} {RNA1310_20528.1, RNA1509_57832} {RNA1509_57832, RNA815_30713}
20. MligTC455_19124 68 1.41 Mlig455_056714

Neo: -

Age: Up-Down-Up

 NPFFR1 0.962 - - - - - 0.962 Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}
21. MligTC455_26163 79 1.65 Mlig455_012294, Mlig455_012299

Neo: -

Age: Down-Up-Down

 0.962 - - - - - 0.962

Mlig455_012294 {REF} {Length: 653} {NoTransDecoderORF} {RNA1509_8784} {RNA1310_47579} {RNA815_29176.2}

Mlig455_012299 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_8784} {RNA1310_47579} {RNA815_29176.2}
22. MligTC455_30121 227 4.74 Mlig455_049656

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.514

 ZBED1 0.961 - - - - - 0.961 Mlig455_049656 {REF} {Length: 5385} {TRANSSPLICED} {Pfam: hAT family C-terminal dimerisation region [PF05699.16, score=44.1]; BED zinc finger [PF02892.17, score=30.7]} {Human: ENSG00000214717, ZBED1, zinc finger BED-type containing 1, [Score=89.0, Expect=1e-17]} {Mouse: ENSMUSG00000094410, Gm38394, predicted gene, 38394, [Score=59.3, Expect=1e-08]; ENSMUSG00000102049, Zbed6, zinc finger, BED type containing 6, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_18427_0_1, dd_Smed_v6_18427_0_1, [Score=49.7, Expect=4e-06]} {RNA1509_6537} {RNA1310_5792, RNA1509_6537} {RNA1509_6537, RNA815_1502}
23. MligTC455_38114 228 4.74 Mlig455_012774, Mlig455_070139

Neo: -

Age: -

 0.96 - - - - - 0.960

Mlig455_012774 {REF} {Length: 1873} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_34010} {RNA815_56430}

Mlig455_070139 {REF} {Length: 863} {NoTransDecoderORF} {RNA1509_58500} {RNA1310_49425} {RNA815_65230}
24. MligTC455_21911 1207 25.15 Mlig455_003039, Mlig455_003244, Mlig455_003332, Mlig455_006723

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_003039 {REF} {Length: 5928} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_003244 {REF} {Length: 6672} {TRANSSPLICED} {RNA1509_16128, RNA1509_2395} {RNA1310_756, RNA1509_16128, RNA1509_2395} {RNA1509_16128, RNA1509_2395, RNA815_226}

Mlig455_003332 {REF} {Length: 6599} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226}

Mlig455_006723 {REF} {Length: 463} {NoTransDecoderORF}
25. MligTC455_23808 31 0.65 Mlig455_059306

Neo: -

Age: Down-Down-Up

 0.957 - - - - - 0.957 Mlig455_059306 {REF} {Length: 1845} {Pfam: Pacifastin inhibitor (LCMII) [PF05375.15, score=30.7]} {RNA1509_46843} {RNA1310_11232} {RNA815_41042}
26. MligTC455_31736 229 4.77 Mlig455_005581

Neo: -

Age: -

 AC006059.2 0.957 - - - - - 0.957 Mlig455_005581 {REF} {Length: 3051} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4164) [PF13747.8, score=18.9]} {Human: ENSG00000280571, AC006059.2, novel transcript, [Score=165, Expect=1e-42]; ENSG00000244607, CCDC13, coiled-coil domain containing 13, [Score=164, Expect=2e-42]} {Mouse: ENSMUSG00000079235, Ccdc13, coiled-coil domain containing 13, [Score=142, Expect=3e-35]} {Smed: dd_Smed_v6_12055_0_1, dd_Smed_v6_12055_0_1, [Score=162, Expect=7e-43]} {RNA1509_34806} {RNA1310_11271} {RNA815_3539}
27. MligTC455_06814 49 1.02 Mlig455_046899

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_046899 {REF} {Length: 337}
28. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
29. MligTC455_24711 46 0.96 Mlig455_015705

Neo: -

Age: -

Regeneration-upregulated BL: 6.967

Regeneration-enriched BL: 6.967

 0.956 - - - - - 0.956 Mlig455_015705 {REF} {Length: 1380} {NoTransDecoderORF} {RNA1509_40708} {RNA1310_77515} {RNA815_26884}
30. MligTC455_28130 73 1.52 Mlig455_017884

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_017884 {REF} {Length: 3157} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
31. MligTC455_44149 574 11.97 Mlig455_025863, Mlig455_025925

Neo: -

Age: -

 PCM1 0.956 - - - - 0.956 -

Mlig455_025863 {REF} {Length: 4700} {TRANSSPLICED} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=208.2]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [Score=200, Expect=5e-52]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [Score=199, Expect=9e-52]} {RNA1509_4175} {RNA1310_1887} {RNA815_3794.1}

Mlig455_025925 {REF} {Length: 4856} {TRANSSPLICED} {Pfam: Pericentriolar material 1 C terminus [PF15717.7, score=206.3]} {Human: ENSG00000078674, PCM1, pericentriolar material 1, [Score=200, Expect=5e-52]} {Mouse: ENSMUSG00000031592, Pcm1, pericentriolar material 1, [Score=198, Expect=1e-51]} {RNA1509_4175} {RNA1310_1887, RNA1509_4175} {RNA1509_4175, RNA815_3794.1}
32. MligTC455_31391 144 2.99 Mlig455_053040

Neo: -

Age: -

 HNRNPUL1 0.955 - - - - - 0.955 Mlig455_053040 {REF} {Length: 5181} {Pfam: AAA domain [PF13671.8, score=30.8]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=84.7, Expect=8e-16]} {Mouse: ENSMUSG00000040725, Hnrnpul1, heterogeneous nuclear ribonucleoprotein U-like 1, [Score=84.7, Expect=7e-16]} {RNA1509_10194} {RNA1310_2966} {RNA815_2126}
33. MligTC455_17040 75 1.57 Mlig455_029809

Neo: -

Age: -

Region-enriched R7: 3.328/0.01605

 ARHGAP39 0.954 - - - - - 0.954 Mlig455_029809 {REF} {Length: 3933} {Pfam: MyTH4 domain [PF00784.19, score=92.2]; RhoGAP domain [PF00620.29, score=84.9]} {Human: ENSG00000147799, ARHGAP39, Rho GTPase activating protein 39, [Score=266, Expect=1e-79]} {Mouse: ENSMUSG00000033697, Arhgap39, Rho GTPase activating protein 39, [Score=265, Expect=4e-79]} {Dmel: FBgn0038853, RhoGAP93B, Rho GTPase activating protein at 93B, [Score=221, Expect=1e-63]} {Celegans: WBGene00022365, Y92H12BL.4, [Score=149, Expect=1e-40]} {Smed: dd_Smed_v6_5836_0_1, dd_Smed_v6_5836_0_1, [Score=125, Expect=4e-31]} {RNA1310_44535} {RNA815_34943}
34. MligTC455_17202 24 0.5 Mlig455_036586

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_036586 {REF} {Length: 796} {NoTransDecoderORF} {RNA1509_49774} {RNA1310_108945} {RNA815_28075}
35. MligTC455_43990 349 7.27 Mlig455_062215

Neo: Irradiation

Age: Up-Down-Down

 0.954 - - - 0.954 - - Mlig455_062215 {REF} {Length: 733} {NoTransDecoderORF} {RNA1509_42323, RNA1509_47967} {RNA1310_60174, RNA1509_42323, RNA1509_47967} {RNA1509_42323, RNA1509_47967, RNA815_30810}
36. MligTC455_44993 102 2.13 Mlig455_068082

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.499

Region-enriched R4: 3.035/0.03492

 MEN1 0.954 - - - - - 0.954 Mlig455_068082 {REF} {Length: 4679} {TRANSSPLICED} {Pfam: Menin [PF05053.15, score=359.0]} {Human: ENSG00000133895, MEN1, menin 1, [RH, Score=259, Expect=6e-77]} {Mouse: ENSMUSG00000024947, Men1, multiple endocrine neoplasia 1, [RH, Score=258, Expect=2e-76]; ENSMUSG00000106695, Men1, multiple endocrine neoplasia 1, [RH, Score=258, Expect=2e-76]} {Dmel: FBgn0031885, Mnn1, Menin 1, [RH, Score=219, Expect=4e-61]} {Smed: dd_Smed_v6_11544_0_1, dd_Smed_v6_11544_0_1, [RH, Score=206, Expect=2e-56]} {RNA1509_25186} {RNA1310_10581.1} {RNA815_3602}
37. MligTC455_14387 463 9.64 Mlig455_022195

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_022195 {REF} {Length: 2088} {NoTransDecoderORF} {RNA1509_22930} {RNA1310_28859} {RNA815_13691}
38. MligTC455_12197 252 5.26 Mlig455_017087

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.888/0.03999

 CXorf65 0.952 - - - - - 0.952 Mlig455_017087 {REF} {Length: 1998} {Pfam: Putative Interleukin 2 receptor, gamma chain [PF15874.7, score=80.7]} {Human: ENSG00000204165, CXorf65, chromosome X open reading frame 65, [Score=45.8, Expect=5e-06]} {Mouse: ENSMUSG00000090141, Gm614, predicted gene 614, [Score=48.9, Expect=3e-07]} {RNA1509_30706} {RNA1310_4498.2} {RNA815_1649}
39. MligTC455_14386 430 8.96 Mlig455_022154

Neo: -

Age: -

Region-enriched R4: 1.533/0.03412

 0.952 - - - - 0.952 - Mlig455_022154 {REF} {Length: 520} {NoTransDecoderORF} {RNA1509_22930} {RNA1310_39560} {RNA815_25324}
40. MligTC455_27488 79 1.65 Mlig455_006237

Neo: -

Age: Down-Up-Down

 ANKRD17 0.952 - - - - - 0.952 Mlig455_006237 {REF} {Length: 4623} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=203.3]; Ankyrin repeats (many copies) [PF13637.8, score=140.3]; Ankyrin repeat [PF13606.8, score=112.1]; Ankyrin repeat [PF00023.32, score=88.7]; Ankyrin repeats (many copies) [PF13857.8, score=87.3]; Mab-21 protein [PF03281.16, score=42.5]; Transcription factor BRX N-terminal domain [PF13713.8, score=27.4]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=134, Expect=4e-31]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=135, Expect=2e-31]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=99.0, Expect=2e-20]} {Celegans: WBGene00012124, T28D6.4, [Score=92.8, Expect=7e-19]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=127, Expect=2e-29]} {RNA1509_27730, RNA1509_51137} {RNA1310_4721, RNA1509_51137} {RNA1509_51137, RNA815_2426.1}
41. MligTC455_30836 117 2.43 Mlig455_006336

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.295

 ULK4 0.952 - - - - - 0.952 Mlig455_006336 {REF} {Length: 12448} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=49.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=24.7]} {Human: ENSG00000168038, ULK4, unc-51 like kinase 4, [Score=433, Expect=1e-130]} {Mouse: ENSMUSG00000040936, Ulk4, unc-51-like kinase 4, [RH, Score=362, Expect=4e-105]} {Dmel: FBgn0001079, fu, fused, [Score=62.0, Expect=3e-09]} {Celegans: WBGene00012929, rsks-1, Ribosomal protein S6 kinase beta, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_7178_0_1, dd_Smed_v6_7178_0_1, [Score=308, Expect=6e-87]} {RNA1509_16008, RNA1509_20834} {RNA1310_1128.1, RNA1509_20834} {RNA1509_20834, RNA815_871}
42. MligTC455_55434 12 0.24 Mlig455_027850

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_027850 {REF} {Length: 485} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=116.0]} {Dmel: FBgn0034583, CG10527, [Score=97.8, Expect=5e-25]} {Smed: dd_Smed_v6_87_0_2, dd_Smed_v6_87_0_2, [Score=129, Expect=6e-39]} {RNA1509_43784} {RNA1310_37041.1} {RNA815_16844.2}
43. MligTC455_10321 235 4.89 Mlig455_004945, Mlig455_035629, Mlig455_055310

Neo: -

Age: -

 0.951 - - - - - 0.951

Mlig455_004945 {REF} {Length: 80} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_035629 {REF} {Length: 143} {NoTransDecoderORF} {RNA1509_52583} {RNA1310_6592} {RNA815_13363}

Mlig455_055310 {REF} {Length: 2978} {RNA1509_52583} {RNA1310_43983.1} {RNA815_13363}
44. MligTC455_14531 41 0.86 Mlig455_064164

Neo: -

Age: Up-Down-Up

 RASEF 0.951 - - - - - 0.951 Mlig455_064164 {REF} {Length: 2737} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=96.7]; ADP-ribosylation factor family [PF00025.23, score=52.8]; EF-hand domain [PF13405.8, score=34.2]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=31.0]; 50S ribosome-binding GTPase [PF01926.25, score=23.4]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.9]; EF hand [PF13202.8, score=20.1]; EF-hand domain pair [PF13833.8, score=18.8]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=174, Expect=3e-45]; ENSG00000130038, CRACR2A, calcium release activated channel regulator 2A, [Score=171, Expect=5e-44]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=181, Expect=4e-48]} {Dmel: FBgn0005586, Rab3, [Score=130, Expect=3e-34]} {Celegans: WBGene00016344, rsef-1, Ras and EF-hand domain-containing protein homolog, [Score=174, Expect=6e-46]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=244, Expect=4e-70]} {RNA1310_63313}
45. MligTC455_26645 132 2.74 Mlig455_032393, Mlig455_032437

Neo: -

Age: -

 B4GALT1 0.951 - - - - - 0.951

Mlig455_032393 {REF} {Length: 2140} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=128.2]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=178, Expect=1e-51]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=174, Expect=4e-50]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=174, Expect=7e-51]} {RNA1310_17913} {RNA815_20156}

Mlig455_032437 {REF} {Length: 2249} {Pfam: N-terminal region of glycosyl transferase group 7 [PF13733.8, score=126.3]; N-terminal domain of galactosyltransferase [PF02709.16, score=66.3]} {Human: ENSG00000086062, B4GALT1, beta-1,4-galactosyltransferase 1, [Score=181, Expect=9e-53]} {Mouse: ENSMUSG00000028413, B4galt1, UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1, [Score=176, Expect=5e-51]} {Dmel: FBgn0027538, beta4GalNAcTA, [Score=149, Expect=6e-41]} {Celegans: WBGene00000269, bre-4, Beta-1,4-N-acetylgalactosaminyltransferase bre-4, [Score=166, Expect=2e-47]} {Smed: dd_Smed_v6_12436_0_1, dd_Smed_v6_12436_0_1, [Score=172, Expect=3e-50]} {RNA1310_17913} {RNA815_20156}
46. MligTC455_33166 57 1.2 Mlig455_059521

Neo: -

Age: Down-Up-Down

 0.951 - - - - - 0.951 Mlig455_059521 {REF} {Length: 812} {NoTransDecoderORF} {RNA1509_31268} {RNA1310_8042.1} {RNA815_21467}
47. MligTC455_39480 329 6.85 Mlig455_011549, Mlig455_051064

Neo: -

Age: -

Region-enriched R4: 3.755/0.01990

 RAC1 0.951 - - - - - 0.951

Mlig455_011549 {REF} {Length: 3198} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.0]; ADP-ribosylation factor family [PF00025.23, score=32.1]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [RH, Score=360, Expect=5e-128]; ENSG00000128340, RAC2, Rac family small GTPase 2, [RH, Score=357, Expect=4e-127]; ENSG00000169750, RAC3, Rac family small GTPase 3, [RH, Score=344, Expect=9e-122]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [RH, Score=360, Expect=3e-128]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [RH, Score=355, Expect=3e-126]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [RH, Score=344, Expect=6e-122]} {Dmel: FBgn0010333, Rac1, [RH, Score=353, Expect=8e-126]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [RH, Score=349, Expect=3e-124]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [RH, Score=324, Expect=2e-114]} {RNA1509_19427} {RNA1310_28974} {RNA815_25738}

Mlig455_051064 {REF} {Length: 2361} {Pfam: Ras family [PF00071.24, score=186.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.1]; ADP-ribosylation factor family [PF00025.23, score=33.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [RH, Score=358, Expect=3e-127]; ENSG00000128340, RAC2, Rac family small GTPase 2, [RH, Score=355, Expect=3e-126]; ENSG00000169750, RAC3, Rac family small GTPase 3, [RH, Score=342, Expect=5e-121]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [RH, Score=358, Expect=2e-127]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [RH, Score=353, Expect=2e-125]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [RH, Score=342, Expect=4e-121]} {Dmel: FBgn0010333, Rac1, [RH, Score=351, Expect=5e-125]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [RH, Score=347, Expect=2e-123]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [RH, Score=322, Expect=1e-113]} {RNA1509_19427} {RNA1310_28974} {RNA815_25738}
48. MligTC455_11211 64 1.33 Mlig455_014750

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_014750 {REF} {Length: 809} {NoTransDecoderORF} {RNA1509_24925, RNA1509_33762} {RNA1310_64582, RNA1509_33762} {RNA1509_33762, RNA815_39421}
49. MligTC455_16142 67 1.41 Mlig455_028937

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_028937 {REF} {Length: 2115} {NoTransDecoderORF} {RNA1509_53775} {RNA1310_26215.1, RNA1509_53775} {RNA1509_53775, RNA815_54266}
50. MligTC455_16563 99 2.06 Mlig455_024661

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-1.016

 0.95 - - - - - 0.950 Mlig455_024661 {REF} {Length: 1238} {RNA1509_16913} {RNA1310_34604.1} {RNA815_16687}
51. MligTC455_20908 268 5.58 Mlig455_000262

Neo: -

Age: Up-Down-Down

 NALCN 0.95 - - - - - 0.950 Mlig455_000262 {REF} {Length: 6526} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=369.8]; Polycystin cation channel [PF08016.14, score=20.1]} {Human: ENSG00000102452, NALCN, sodium leak channel, non-selective, [Score=1434, Expect=0.0]} {Mouse: ENSMUSG00000000197, Nalcn, sodium leak channel, non-selective, [Score=1439, Expect=0.0]} {Dmel: FBgn0002917, na, narrow abdomen, [Score=1431, Expect=0.0]} {Celegans: WBGene00006809, unc-77, Four domain-type voltage-gated ion channel alpha-1 subunit, [Score=1234, Expect=0.0]} {Smed: dd_Smed_v6_7314_0_1, dd_Smed_v6_7314_0_1, [Score=1574, Expect=0.0]} {RNA1509_7317} {RNA1310_530.1} {RNA815_339.1}
52. MligTC455_48591 25 0.53 Mlig455_047514, Mlig455_059649

Neo: -

Age: -

 NEUROD1 0.95 - - - - - 0.950

Mlig455_047514 {REF} {Length: 1271} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=54.8]; Neuronal helix-loop-helix transcription factor [PF12533.10, score=51.0]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [Score=140, Expect=1e-38]; ENSG00000164600, NEUROD6, neuronal differentiation 6, [Score=136, Expect=1e-37]} {Mouse: ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [Score=139, Expect=1e-38]; ENSMUSG00000037984, Neurod6, neurogenic differentiation 6, [Score=133, Expect=1e-36]} {Dmel: FBgn0010433, ato, atonal, [Score=82.0, Expect=8e-18]} {Celegans: WBGene00000561, cnd-1, Neurogenic differentiation factor 1, [Score=127, Expect=6e-36]} {Smed: dd_Smed_v6_21717_0_1, dd_Smed_v6_21717_0_1, [RH, Score=136, Expect=2e-39]} {RNA1310_133631} {RNA815_38093}

Mlig455_059649 {REF} {Length: 945} {Pfam: Neuronal helix-loop-helix transcription factor [PF12533.10, score=20.2]} {RNA1310_133631} {RNA815_38093}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA