Data search
Results for MligTC455_18875
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_18875 | 129 | 2.68 | Mlig455_017470 | Neo: Irradiation Age: logFC(26M/2M)=0.370 Region-enriched R5: 3.730/0.00126 |
SLC18B1 | Mlig455_017470 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.9]; MFS/sugar transport protein [PF13347.8, score=23.9]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=208, Expect=3e-61]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=208, Expect=2e-61]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=230, Expect=6e-70]} {Smed: dd_Smed_v6_5294_0_1, dd_Smed_v6_5294_0_1, [RH, Score=105, Expect=2e-24]} {RNA1509_24736, RNA1509_9855} {RNA1310_13054.1, RNA1509_24736} {RNA1509_24736, RNA815_4605} |
Cumulative graph for MligTC455_18875
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.825 | 2.131 | 0.57500 | 1.00000 | |
| RegionR2 | 0.109 | 2.131 | 0.68492 | 1.00000 | |
| RegionR3 | -1.042 | 2.131 | 0.93789 | 1.00000 | |
| RegionR4 | 2.288 | 2.131 | 0.07051 | 0.24327 | |
| RegionR5 | 3.73 | 2.131 | 0.00007 | 0.00126 | |
| RegionR6 | 1.833 | 2.131 | 0.10751 | 0.60044 | |
| RegionR7 | -4.258 | 2.131 | 0.99953 | 1.00000 | |
| RegionR8 | -3.486 | 2.131 | 0.99977 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.534 | 2.131 | 0.34266 | 1.00000 | |
| RegenerationR2 | -0.862 | 2.131 | 0.34946 | 0.78136 | |
| RegenerationR3 | 1.158 | 2.131 | 0.31454 | 0.74458 | |
| RegenerationR4 | -0.387 | 2.131 | 0.74935 | 0.96996 | |
| RegenerationR5 | 0.116 | 2.131 | 0.89692 | 1.00000 | |
| RegenerationR6 | -0.256 | 2.131 | 0.78861 | 0.97190 | |
| RegenerationBL | -2.963 | 2.131 | 0.99961 | 1.00000 | |
| RegenerationTP | 3.909 | 2.131 | 0.12864 | 0.54087 |
Genes with expression patterns similar to MligTC455_18875
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_18875 | 129 | 2.68 | Mlig455_017470 | Neo: Irradiation Age: logFC(26M/2M)=0.370 Region-enriched R5: 3.730/0.00126 |
SLC18B1 | 4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017470 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.9]; MFS/sugar transport protein [PF13347.8, score=23.9]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=208, Expect=3e-61]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=208, Expect=2e-61]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=230, Expect=6e-70]} {Smed: dd_Smed_v6_5294_0_1, dd_Smed_v6_5294_0_1, [RH, Score=105, Expect=2e-24]} {RNA1509_24736, RNA1509_9855} {RNA1310_13054.1, RNA1509_24736} {RNA1509_24736, RNA815_4605} |
| 2. | MligTC455_47753 | 540 | 11.25 | Mlig455_025424 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 1.577/0.00074 |
1.857 | - | - | 0.958 | - | - | 0.899 | Mlig455_025424 {REF} {Length: 1697} {TRANSSPLICED} {RNA1509_20139, RNA1509_33887} {RNA1310_18333, RNA1509_20139, RNA1509_33887} {RNA1509_20139, RNA1509_33887, RNA815_2604} | |
| 3. | MligTC455_45029 | 798 | 16.63 | Mlig455_005222 | Neo: Irradiation Age: - Region-enriched R5: 1.361/0.00000 |
1.848 | - | - | 0.972 | - | - | 0.876 | Mlig455_005222 {REF} {Length: 889} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11945} {RNA1310_3516, RNA1509_11945} {RNA1509_11945, RNA815_18821.1} | |
| 4. | MligTC455_33208 | 1038 | 21.63 | Mlig455_017832 | Neo: - Age: Down-Up-Up Region-enriched R5: 1.935/0.00001 |
BCKDK | 1.835 | - | - | 0.957 | - | - | 0.878 | Mlig455_017832 {REF} {Length: 2184} {Pfam: Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase [PF10436.11, score=122.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=52.8]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=22.5]} {Human: ENSG00000103507, BCKDK, branched chain ketoacid dehydrogenase kinase, [Score=438, Expect=2e-152]} {Mouse: ENSMUSG00000030802, Bckdk, branched chain ketoacid dehydrogenase kinase, [Score=441, Expect=7e-154]} {Dmel: FBgn0017558, Pdk, Pyruvate dehydrogenase kinase, [Score=127, Expect=1e-32]} {Celegans: WBGene00022719, pdhk-2, Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial, [Score=132, Expect=2e-34]} {Smed: dd_Smed_v6_7445_0_2, dd_Smed_v6_7445_0_2, [Score=407, Expect=3e-140]} {RNA1509_17050} {RNA1310_13545, RNA1509_17050} {RNA1509_17050, RNA815_5093} |
| 5. | MligTC455_28257 | 136 | 2.83 | Mlig455_030255 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.637/0.00141 |
1.834 | - | - | - | 0.877 | - | 0.957 | Mlig455_030255 {REF} {Length: 1442} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
| 6. | MligTC455_47020 | 573 | 11.94 | Mlig455_042870 | Neo: Irradiation Age: - Region-enriched R5: 1.835/0.00027 |
0.983 | - | - | - | - | - | 0.983 | Mlig455_042870 {REF} {Length: 2227} {TRANSSPLICED} {RNA1509_36308} {RNA1310_9308.1} {RNA815_15211.1} | |
| 7. | MligTC455_47021 | 609 | 12.68 | Mlig455_042879 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.571 Region-enriched R5: 1.845/0.00023 |
NUP35 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_042879 {REF} {Length: 3231} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514} {RNA1310_9308.1} {RNA815_19261} |
| 8. | MligTC455_30881 | 1063 | 22.16 | Mlig455_030238, Mlig455_056816, Mlig455_061738, Mlig455_064441 | Neo: - Age: Down-Up-Down Region-enriched R5: 3.062/0.00000 |
ANKRD44 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_030238 {REF} {Length: 1434} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} Mlig455_056816 {REF} {Length: 1414} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} Mlig455_061738 {REF} {Length: 1154} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.5]; Ankyrin repeats (many copies) [PF13637.8, score=31.9]; Ankyrin repeat [PF13606.8, score=25.0]; Ankyrin repeat [PF00023.32, score=20.7]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=47.8, Expect=1e-05]} {RNA1509_49250} {RNA1310_19601.1} {RNA815_7202.1} Mlig455_064441 {REF} {Length: 700} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.7]; Ankyrin repeats (many copies) [PF13637.8, score=41.3]; Ankyrin repeats (many copies) [PF13857.8, score=37.8]; Ankyrin repeat [PF00023.32, score=34.2]; Ankyrin repeat [PF13606.8, score=30.3]} {RNA1509_49250} {RNA1310_13549.1} {RNA815_7202.1} |
| 9. | MligTC455_44175 | 678 | 14.11 | Mlig455_002973 | Neo: Int S/G2/M Age: Down-Up-Up Region-specific R5: 3.001 Region-enriched R5: 2.682/0.00000 |
AC008012.1 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_002973 {REF} {Length: 2788} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=88.3]; Cyclin, C-terminal domain [PF02984.21, score=21.1]} {Human: ENSG00000285901, AC008012.1, novel transcript, [RH, Score=97.8, Expect=2e-23]; ENSG00000118971, CCND2, cyclin D2, [RH, Score=96.7, Expect=8e-23]} {Mouse: ENSMUSG00000000184, Ccnd2, cyclin D2, [RH, Score=92.4, Expect=2e-21]} {Dmel: FBgn0010315, CycD, Cyclin D, [RH, Score=73.9, Expect=2e-14]} {Celegans: WBGene00000863, cya-1, G2/mitotic-specific cyclin-A1, [Score=48.9, Expect=2e-06]} {RNA1509_25341} {RNA1310_33092, RNA1509_25341} {RNA1509_25341, RNA815_15326} |
| 10. | MligTC455_28256 | 415 | 8.65 | Mlig455_061737 | Neo: Irradiation Age: logFC(26M/2M)=-0.538 Region-enriched R5: 2.541/0.00000 |
MAP3K19 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_061737 {REF} {Length: 4950} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=182.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.5]; Ankyrin repeats (3 copies) [PF12796.9, score=120.5]; Ankyrin repeats (many copies) [PF13637.8, score=77.9]; Ankyrin repeats (many copies) [PF13857.8, score=53.3]; Ankyrin repeat [PF00023.32, score=47.7]; Ankyrin repeat [PF13606.8, score=46.5]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Ankyrin ubiquitin-binding domain [PF18418.3, score=26.2]; Fungal protein kinase [PF17667.3, score=24.3]; Family of unknown function (DUF6189) [PF19688.1, score=23.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=152, Expect=1e-38]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=151, Expect=1e-38]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=145, Expect=3e-36]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=134, Expect=9e-34]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [Score=130, Expect=2e-33]} {RNA1509_12584, RNA1509_22244} {RNA1310_30847, RNA1509_12584} {RNA1509_12584, RNA815_7836.1} |
| 11. | MligTC455_33526 | 255 | 5.31 | Mlig455_033689 | Neo: Irradiation Age: - Region-specific R5: 5.813 Region-enriched R5: 4.492/0.00000 |
0.959 | - | - | - | - | - | 0.959 | Mlig455_033689 {REF} {Length: 673} {NoTransDecoderORF} {RNA1509_59569} {RNA1310_19870} {RNA815_7901.1} | |
| 12. | MligTC455_48058 | 194 | 4.05 | Mlig455_069731 | Neo: Irradiation Age: - |
EXD3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_069731 {REF} {Length: 5240} {Pfam: 3'-5' exonuclease [PF01612.22, score=58.1]} {Human: ENSG00000187609, EXD3, exonuclease 3'-5' domain containing 3, [RH, Score=132, Expect=6e-31]} {Mouse: ENSMUSG00000031583, Wrn, Werner syndrome RecQ like helicase, [Score=53.9, Expect=1e-06]} {Dmel: FBgn0032924, Nbr, Nibbler, [RH, Score=124, Expect=5e-29]} {Celegans: WBGene00013256, Y57A10A.13, [RH, Score=68.6, Expect=2e-11]} {RNA1509_12931, RNA1509_51823} {RNA1310_5113, RNA1509_12931, RNA1509_51823} {RNA1509_12931, RNA1509_51823, RNA815_7847} |
| 13. | MligTC455_17833 | 774 | 16.13 | Mlig455_030235, Mlig455_068013 | Neo: Irradiation Age: logFC(26M/2M)=0.363 Region-enriched R2: 4.738/0.01809 |
SLC47A1 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_030235 {REF} {Length: 3827} {Pfam: MatE [PF01554.20, score=108.9]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=172, Expect=2e-46]; ENSG00000180638, SLC47A2, solute carrier family 47 member 2, [Score=172, Expect=2e-46]} {Mouse: ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=185, Expect=4e-51]} {Smed: dd_Smed_v6_10595_0_1, dd_Smed_v6_10595_0_1, [Score=174, Expect=2e-47]} {RNA1509_24358, RNA1509_27371, RNA1509_60151, RNA1509_7558} {RNA1310_12251, RNA1509_24358, RNA1509_27371, RNA1509_60151, RNA1509_7558} {RNA1509_24358, RNA1509_27371, RNA1509_60151, RNA1509_7558, RNA815_8297} Mlig455_068013 {REF} {Length: 4825} {Pfam: MatE [PF01554.20, score=116.9]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=155, Expect=1e-41]; ENSG00000180638, SLC47A2, solute carrier family 47 member 2, [Score=148, Expect=7e-39]} {Mouse: ENSMUSG00000069855, Slc47a2, solute carrier family 47, member 2, [Score=163, Expect=3e-45]} {Smed: dd_Smed_v6_11376_0_1, dd_Smed_v6_11376_0_1, [Score=149, Expect=1e-39]} {RNA1509_54056, RNA1509_55833, RNA1509_7558} {RNA1310_12251, RNA1509_54056, RNA1509_55833} {RNA1509_54056, RNA1509_55833, RNA815_8297} |
| 14. | MligTC455_17948 | 407 | 8.49 | Mlig455_053925, Mlig455_060566 | Neo: Irradiation Age: - Region-enriched R5: 2.149/0.00051 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_053925 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} Mlig455_060566 {REF} {Length: 1132} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} |
|
| 15. | MligTC455_20217 | 498 | 10.38 | Mlig455_048847 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.441 Region-enriched R5: 2.582/0.00025 |
LANCL2 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_048847 {REF} {Length: 1639} {TRANSSPLICED} {Pfam: Lanthionine synthetase C-like protein [PF05147.15, score=188.5]} {Human: ENSG00000132434, LANCL2, LanC like 2, [RH, Score=241, Expect=4e-74]; ENSG00000115365, LANCL1, LanC like 1, [RH, Score=240, Expect=1e-74]} {Mouse: ENSMUSG00000062190, Lancl2, LanC (bacterial lantibiotic synthetase component C)-like 2, [RH, Score=238, Expect=2e-73]; ENSMUSG00000026000, Lancl1, LanC (bacterial lantibiotic synthetase component C)-like 1, [RH, Score=236, Expect=6e-73]} {Dmel: FBgn0027498, CG2061, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_10666_0_1, dd_Smed_v6_10666_0_1, [RH, Score=213, Expect=1e-64]} {RNA1509_19335} {RNA1310_18268, RNA1509_19335} {RNA1509_19335, RNA815_7120} |
| 16. | MligTC455_36280 | 634 | 13.2 | Mlig455_045390, Mlig455_045485 | Neo: - Age: - Region-enriched R5: 1.183/0.04653 Regeneration-upregulated BL: 2.313 Regeneration-enriched BL: 2.313 |
SON | 0.953 | - | - | - | - | - | 0.953 | Mlig455_045390 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=52.4]; Double-stranded RNA binding motif [PF00035.28, score=39.9]; double strand RNA binding domain from DEAD END PROTEIN 1 [PF14709.9, score=33.3]; G-patch domain [PF12656.9, score=20.1]} {Human: ENSG00000159140, SON, SON DNA binding protein, [RH, Score=179, Expect=6e-46]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [RH, Score=178, Expect=6e-46]} {Dmel: FBgn0037716, CG8273, [RH, Score=130, Expect=8e-31]} {Celegans: WBGene00017025, D1037.1, [RH, Score=120, Expect=4e-28]} {Smed: dd_Smed_v6_11088_0_3, dd_Smed_v6_11088_0_3, [RH, Score=68.2, Expect=3e-12]} {RNA1509_19845} {RNA1310_13389, RNA1509_19845} {RNA1509_19845, RNA815_22165} Mlig455_045485 {REF} {Length: 2759} {TRANSSPLICED} {Pfam: G-patch domain [PF01585.25, score=52.4]; G-patch domain [PF12656.9, score=20.1]} {Human: ENSG00000159140, SON, SON DNA binding protein, [RH, Score=144, Expect=1e-34]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [RH, Score=144, Expect=6e-35]} {Dmel: FBgn0037716, CG8273, [Score=100, Expect=2e-21]} {Celegans: WBGene00017025, D1037.1, [Score=89.7, Expect=3e-18]} {Smed: dd_Smed_v6_11088_0_2, dd_Smed_v6_11088_0_2, [RH, Score=58.9, Expect=3e-09]} {RNA1509_19845} {RNA1310_13389} {RNA815_22165} |
| 17. | MligTC455_40008 | 374 | 7.8 | Mlig455_051419 | Neo: Irradiation Age: - Region-enriched R5: 4.032/0.00000 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_051419 {REF} {Length: 2553} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.7]} {RNA1509_13200} {RNA1310_14061, RNA1509_13200} {RNA1509_13200, RNA815_8949} | |
| 18. | MligTC455_14367 | 696 | 14.5 | Mlig455_003962, Mlig455_005983 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 3.873/0.00000 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_003962 {REF} {Length: 1464} {TRANSSPLICED} {RNA1509_13794, RNA1509_49701, RNA1509_54051} {RNA1310_18687.2, RNA1509_49701, RNA1509_54051} {RNA1509_49701, RNA1509_54051, RNA815_9501} Mlig455_005983 {REF} {Length: 1464} {TRANSSPLICED} {RNA1509_13794} {RNA1310_18687.2, RNA1509_13794} {RNA1509_13794, RNA815_9501} |
|
| 19. | MligTC455_44338 | 719 | 14.98 | Mlig455_041655 | Neo: Irradiation Age: - Region-enriched R5: 2.104/0.00000 |
TECTB | 0.952 | - | - | - | - | - | 0.952 | Mlig455_041655 {REF} {Length: 2872} {TRANSSPLICED} {Pfam: Zona pellucida-like domain [PF00100.25, score=93.9]} {Human: ENSG00000119913, TECTB, tectorin beta, [RH, Score=50.4, Expect=4e-06]} {Mouse: ENSMUSG00000024979, Tectb, tectorin beta, [RH, Score=48.9, Expect=3e-06]} {RNA1509_39057, RNA1509_7245} {RNA1310_6151.1, RNA1509_39057, RNA1509_7245} {RNA1509_39057, RNA1509_7245, RNA815_1844} |