Data search
Results for MligTC455_48058
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48058 | 194 | 4.05 | Mlig455_069731 | Neo: Irradiation Age: - |
EXD3 | Mlig455_069731 {REF} {Length: 5240} {Pfam: 3'-5' exonuclease [PF01612.22, score=58.1]} {Human: ENSG00000187609, EXD3, exonuclease 3'-5' domain containing 3, [RH, Score=132, Expect=6e-31]} {Mouse: ENSMUSG00000031583, Wrn, Werner syndrome RecQ like helicase, [Score=53.9, Expect=1e-06]} {Dmel: FBgn0032924, Nbr, Nibbler, [RH, Score=124, Expect=5e-29]} {Celegans: WBGene00013256, Y57A10A.13, [RH, Score=68.6, Expect=2e-11]} {RNA1509_12931, RNA1509_51823} {RNA1310_5113, RNA1509_12931, RNA1509_51823} {RNA1509_12931, RNA1509_51823, RNA815_7847} |
Cumulative graph for MligTC455_48058
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.177 | 2.637 | 0.53270 | 1.00000 | |
| RegionR2 | 1.06 | 2.637 | 0.20632 | 0.56888 | |
| RegionR3 | 0.312 | 2.637 | 0.62962 | 1.00000 | |
| RegionR4 | -0.185 | 2.637 | 0.79908 | 1.00000 | |
| RegionR5 | 1.242 | 2.637 | 0.01923 | 0.09423 | |
| RegionR6 | 1.109 | 2.637 | 0.08200 | 0.52977 | |
| RegionR7 | -1.032 | 2.637 | 0.31364 | 0.94812 | |
| RegionR8 | -1.329 | 2.637 | 0.31223 | 0.94435 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.168 | 2.637 | 0.49213 | 1.00000 | |
| RegenerationR2 | -0.726 | 2.637 | 0.28680 | 0.72976 | |
| RegenerationR3 | 0.284 | 2.637 | 0.70071 | 0.94776 | |
| RegenerationR4 | -0.031 | 2.637 | 0.96690 | 1.00000 | |
| RegenerationR5 | -0.101 | 2.637 | 0.87531 | 1.00000 | |
| RegenerationR6 | -0.603 | 2.637 | 0.40501 | 0.74107 | |
| RegenerationBL | 0.833 | 2.637 | 0.41561 | 0.78467 | |
| RegenerationTP | 0.205 | 2.637 | 0.89731 | 1.00000 |
Genes with expression patterns similar to MligTC455_48058
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48058 | 194 | 4.05 | Mlig455_069731 | Neo: Irradiation Age: - |
EXD3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069731 {REF} {Length: 5240} {Pfam: 3'-5' exonuclease [PF01612.22, score=58.1]} {Human: ENSG00000187609, EXD3, exonuclease 3'-5' domain containing 3, [RH, Score=132, Expect=6e-31]} {Mouse: ENSMUSG00000031583, Wrn, Werner syndrome RecQ like helicase, [Score=53.9, Expect=1e-06]} {Dmel: FBgn0032924, Nbr, Nibbler, [RH, Score=124, Expect=5e-29]} {Celegans: WBGene00013256, Y57A10A.13, [RH, Score=68.6, Expect=2e-11]} {RNA1509_12931, RNA1509_51823} {RNA1310_5113, RNA1509_12931, RNA1509_51823} {RNA1509_12931, RNA1509_51823, RNA815_7847} |
| 2. | MligTC455_47020 | 573 | 11.94 | Mlig455_042870 | Neo: Irradiation Age: - Region-enriched R5: 1.835/0.00027 |
1.773 | - | 0.791 | - | - | - | 0.982 | Mlig455_042870 {REF} {Length: 2227} {TRANSSPLICED} {RNA1509_36308} {RNA1310_9308.1} {RNA815_15211.1} | |
| 3. | MligTC455_47021 | 609 | 12.68 | Mlig455_042879 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.571 Region-enriched R5: 1.845/0.00023 |
NUP35 | 1.764 | - | 0.786 | - | - | - | 0.978 | Mlig455_042879 {REF} {Length: 3231} {Pfam: Nup53/35/40-type RNA recognition motif [PF05172.15, score=62.0]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=39.2]} {Human: ENSG00000163002, NUP35, nucleoporin 35, [RH, Score=110, Expect=8e-27]} {Mouse: ENSMUSG00000026999, Nup35, nucleoporin 35, [RH, Score=115, Expect=1e-28]; ENSMUSG00000091900, Gm4353, predicted gene 4353, [RH, Score=115, Expect=1e-28]} {Dmel: FBgn0030943, CG6540, [RH, Score=76.3, Expect=5e-15]} {Celegans: WBGene00003805, npp-19, Nucleoporin NUP53, [RH, Score=62.4, Expect=2e-10]} {Smed: dd_Smed_v6_10329_0_1, dd_Smed_v6_10329_0_1, [RH, Score=75.9, Expect=4e-15]} {RNA1509_29514} {RNA1310_9308.1} {RNA815_19261} |
| 4. | MligTC455_44895 | 217 | 4.53 | Mlig455_059258 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.003/0.03137 |
SMARCC2 | 1.707 | 0.752 | - | - | - | - | 0.955 | Mlig455_059258 {REF} {Length: 2230} {TRANSSPLICED} {Pfam: SWIRM domain [PF04433.19, score=108.8]; SWIRM-associated region 1 [PF16495.7, score=79.8]; SWIRM-associated domain at the C-terminal [PF16498.7, score=47.1]; Myb-like DNA-binding domain [PF00249.33, score=42.8]; Myb-like DNA-binding domain [PF13921.8, score=28.7]} {Human: ENSG00000139613, SMARCC2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, [RH, Score=446, Expect=1e-142]} {Mouse: ENSMUSG00000025369, Smarcc2, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2, [RH, Score=448, Expect=9e-145]} {Dmel: FBgn0002783, mor, moira, [RH, Score=339, Expect=4e-103]} {Celegans: WBGene00004203, swsn-1, SWI/SNF nucleosome remodeling complex component; SWI3-like protein, [RH, Score=329, Expect=1e-102]} {Smed: dd_Smed_v6_1804_0_1, dd_Smed_v6_1804_0_1, [RH, Score=406, Expect=6e-128]} {RNA1509_39768} {RNA1310_5494.1} {RNA815_22591} |
| 5. | MligTC455_22656 | 120 | 2.51 | Mlig455_043027 | Neo: - Age: - |
1.668 | 0.713 | - | - | - | - | 0.955 | Mlig455_043027 {REF} {Length: 1591} {TRANSSPLICED} {RNA1509_43534} {RNA1310_62767.2} {RNA815_36461.1} | |
| 6. | MligTC455_17948 | 407 | 8.49 | Mlig455_053925, Mlig455_060566 | Neo: Irradiation Age: - Region-enriched R5: 2.149/0.00051 |
0.979 | - | - | - | - | - | 0.979 | Mlig455_053925 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} Mlig455_060566 {REF} {Length: 1132} {TRANSSPLICED} {Pfam: Transmembrane proteins 230/134 [PF05915.14, score=64.4]} {Dmel: FBgn0035285, CG12025, [RH, Score=61.6, Expect=5e-12]} {RNA1509_55220} {RNA1310_14992.1} {RNA815_11576} |
|
| 7. | MligTC455_20452 | 725 | 15.1 | Mlig455_068384, Mlig455_068393 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.348 Region-specific R5: 3.269 Region-enriched R5: 2.907/0.00000 |
0.977 | - | - | - | - | - | 0.977 | Mlig455_068384 {REF} {Length: 3173} {RNA1509_25509} {RNA1310_31646} {RNA815_14776.1} Mlig455_068393 {REF} {Length: 1739} {TRANSSPLICED} {RNA1509_25509, RNA1509_60017} {RNA1310_31646, RNA1509_25509, RNA1509_60017} {RNA1509_25509, RNA1509_60017, RNA815_14776.1} |
|
| 8. | MligTC455_53254 | 432 | 8.99 | Mlig455_014867 | Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R5: 2.224/0.00000 |
MAD2L1 | 0.976 | - | - | - | - | - | 0.976 | Mlig455_014867 {REF} {Length: 1995} {Pfam: HORMA domain [PF02301.20, score=81.0]; Autophagy-related protein 13 [PF10033.11, score=19.9]} {Human: ENSG00000164109, MAD2L1, mitotic arrest deficient 2 like 1, [RH, Score=230, Expect=7e-77]} {Mouse: ENSMUSG00000029910, Mad2l1, MAD2 mitotic arrest deficient-like 1, [RH, Score=227, Expect=9e-76]} {Dmel: FBgn0035640, mad2, [RH, Score=187, Expect=4e-60]} {Celegans: WBGene00003161, mdf-2, MAD (Yeast Mitosis arrest DeFicient) related; MDF-2, [RH, Score=203, Expect=1e-66]} {RNA1509_14823} {RNA1310_12974.1} {RNA815_3365} |
| 9. | MligTC455_04197 | 120 | 2.51 | Mlig455_026248 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_026248 {REF} {Length: 758} {NoTransDecoderORF} {RNA1509_48037} {RNA1310_100167} {RNA815_64342} | |
| 10. | MligTC455_52787 | 48 | 1 | Mlig455_052115, Mlig455_054117 | Neo: Int S/G2/M |
NDUFAF7 | 0.962 | - | - | - | - | - | 0.962 | Mlig455_052115 {REF} {Length: 2507} {TRANSSPLICED} {Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase [PF02636.19, score=173.8]} {Human: ENSG00000003509, NDUFAF7, NADH:ubiquinone oxidoreductase complex assembly factor 7, [RH, Score=257, Expect=6e-81]} {Mouse: ENSMUSG00000024082, Ndufaf7, NADH:ubiquinone oxidoreductase complex assembly factor 7, [RH, Score=261, Expect=7e-83]} {Dmel: FBgn0037880, CG17726, [RH, Score=237, Expect=1e-73]} {Celegans: WBGene00014227, ZK1128.1, Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, [RH, Score=202, Expect=1e-60]} {Smed: dd_Smed_v6_10508_0_1, dd_Smed_v6_10508_0_1, [RH, Score=245, Expect=2e-77]} {RNA1509_44403} {RNA1310_21801, RNA1509_44403} {RNA1509_44403, RNA815_5908} Mlig455_054117 {REF} {Length: 2019} {Pfam: Putative S-adenosyl-L-methionine-dependent methyltransferase [PF02636.19, score=174.4]} {Human: ENSG00000003509, NDUFAF7, NADH:ubiquinone oxidoreductase complex assembly factor 7, [Score=190, Expect=1e-55]} {Mouse: ENSMUSG00000024082, Ndufaf7, NADH:ubiquinone oxidoreductase complex assembly factor 7, [Score=194, Expect=2e-57]} {Dmel: FBgn0037880, CG17726, [Score=169, Expect=5e-48]} {Celegans: WBGene00014227, ZK1128.1, Protein arginine methyltransferase NDUFAF7 homolog, mitochondrial, [Score=147, Expect=6e-40]} {Smed: dd_Smed_v6_10508_0_1, dd_Smed_v6_10508_0_1, [Score=177, Expect=1e-51]} {RNA1509_44403} {RNA1310_23552} {RNA815_5908} |
| 11. | MligTC455_47752 | 282 | 5.88 | Mlig455_025375 | Neo: - Age: - Region-enriched R5: 1.507/0.03672 |
0.96 | - | - | - | - | - | 0.960 | Mlig455_025375 {REF} {Length: 1616} {TRANSSPLICED} {RNA1509_33887} {RNA1310_18333} {RNA815_2604} | |
| 12. | MligTC455_31160 | 462 | 9.63 | Mlig455_056370 | Neo: - Age: - |
UBE3B | 0.959 | - | - | - | - | 0.959 | - | Mlig455_056370 {REF} {Length: 5013} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=300.0]} {Human: ENSG00000151148, UBE3B, ubiquitin protein ligase E3B, [RH, Score=820, Expect=0.0]} {Mouse: ENSMUSG00000029577, Ube3b, ubiquitin protein ligase E3B, [RH, Score=815, Expect=0.0]} {Dmel: FBgn0035953, CG5087, [RH, Score=678, Expect=0.0]} {Celegans: WBGene00003898, oxi-1, OXidative stress Induced, [RH, Score=584, Expect=0.0]} {Smed: dd_Smed_v6_9399_0_1, dd_Smed_v6_9399_0_1, [RH, Score=767, Expect=0.0]} {RNA1509_7837} {RNA1310_848.1, RNA1509_7837} {RNA1509_7837, RNA815_4849.1} |
| 13. | MligTC455_18875 | 129 | 2.68 | Mlig455_017470 | Neo: Irradiation Age: logFC(26M/2M)=0.370 Region-enriched R5: 3.730/0.00126 |
SLC18B1 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_017470 {REF} {Length: 2098} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.9]; MFS/sugar transport protein [PF13347.8, score=23.9]} {Human: ENSG00000146409, SLC18B1, solute carrier family 18 member B1, [Score=208, Expect=3e-61]} {Mouse: ENSMUSG00000037455, Slc18b1, solute carrier family 18, subfamily B, member 1, [Score=208, Expect=2e-61]} {Celegans: WBGene00018860, vpat-1, Vesicular PolyAmine Transporter, [Score=230, Expect=6e-70]} {Smed: dd_Smed_v6_5294_0_1, dd_Smed_v6_5294_0_1, [RH, Score=105, Expect=2e-24]} {RNA1509_24736, RNA1509_9855} {RNA1310_13054.1, RNA1509_24736} {RNA1509_24736, RNA815_4605} |
| 14. | MligTC455_04198 | 378 | 7.87 | Mlig455_026233, Mlig455_026271, Mlig455_052724 | Neo: - Age: - |
SLC5A8 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_026233 {REF} {Length: 4948} {TRANSSPLICED} {Pfam: Sodium:solute symporter family [PF00474.19, score=153.9]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=362, Expect=4e-119]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=362, Expect=4e-119]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=363, Expect=1e-119]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=345, Expect=2e-112]} {Dmel: FBgn0034494, CG10444, [Score=333, Expect=3e-108]} {Celegans: WBGene00018716, F52H2.4, [RH, Score=230, Expect=5e-70]} {Smed: dd_Smed_v6_14087_0_1, dd_Smed_v6_14087_0_1, [Score=410, Expect=2e-138]} {RNA1509_48037, RNA1509_48150} {RNA1310_6007.1, RNA1509_48037} {RNA1509_48037, RNA815_11883} Mlig455_026271 {REF} {Length: 4390} {TRANSSPLICED} {Pfam: Sodium:solute symporter family [PF00474.19, score=137.0]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [Score=362, Expect=7e-118]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [Score=362, Expect=7e-118]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [Score=361, Expect=1e-117]; ENSMUSG00000041644, Slc5a12, solute carrier family 5 (sodium/glucose cotransporter), member 12, [Score=347, Expect=4e-112]} {Dmel: FBgn0034494, CG10444, [Score=310, Expect=1e-98]} {Celegans: WBGene00018716, F52H2.4, [Score=196, Expect=3e-56]} {Smed: dd_Smed_v6_14087_0_1, dd_Smed_v6_14087_0_1, [Score=401, Expect=3e-134]} {RNA1509_46590} {RNA1310_6007.1} {RNA815_11883} Mlig455_052724 {REF} {Length: 4759} {TRANSSPLICED} {Pfam: Sodium:solute symporter family [PF00474.19, score=170.1]} {Human: ENSG00000256870, SLC5A8, solute carrier family 5 member 8, [RH, Score=420, Expect=3e-139]; ENSG00000262217, SLC5A8, solute carrier family 5 member 8, [RH, Score=420, Expect=3e-139]} {Mouse: ENSMUSG00000020062, Slc5a8, solute carrier family 5 (iodide transporter), member 8, [RH, Score=419, Expect=4e-139]} {Dmel: FBgn0034494, CG10444, [Score=368, Expect=7e-120]} {Celegans: WBGene00018716, F52H2.4, [RH, Score=239, Expect=9e-72]} {Smed: dd_Smed_v6_14087_0_1, dd_Smed_v6_14087_0_1, [RH, Score=459, Expect=2e-155]} {RNA1509_45648, RNA1509_48150, RNA1509_53273} {RNA1310_6007.1, RNA1509_45648, RNA1509_48150, RNA1509_53273} {RNA1509_45648, RNA1509_48150, RNA1509_53273, RNA815_11883} |
| 15. | MligTC455_21749 | 164 | 3.41 | Mlig455_038710 | Neo: Int S/G2/M Age: Down-Up-Down |
FBXL20 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_038710 {REF} {Length: 2554} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=43.2]; F-box domain [PF00646.35, score=30.0]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=55.8, Expect=2e-08]} {Dmel: FBgn0030555, Fbxl4, F box and leucine-rich-repeat gene 4, [Score=49.7, Expect=5e-06]} {RNA1509_24145} {RNA1310_10089} {RNA815_9985} |
| 16. | MligTC455_44175 | 678 | 14.11 | Mlig455_002973 | Neo: Int S/G2/M Age: Down-Up-Up Region-specific R5: 3.001 Region-enriched R5: 2.682/0.00000 |
AC008012.1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_002973 {REF} {Length: 2788} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=88.3]; Cyclin, C-terminal domain [PF02984.21, score=21.1]} {Human: ENSG00000285901, AC008012.1, novel transcript, [RH, Score=97.8, Expect=2e-23]; ENSG00000118971, CCND2, cyclin D2, [RH, Score=96.7, Expect=8e-23]} {Mouse: ENSMUSG00000000184, Ccnd2, cyclin D2, [RH, Score=92.4, Expect=2e-21]} {Dmel: FBgn0010315, CycD, Cyclin D, [RH, Score=73.9, Expect=2e-14]} {Celegans: WBGene00000863, cya-1, G2/mitotic-specific cyclin-A1, [Score=48.9, Expect=2e-06]} {RNA1509_25341} {RNA1310_33092, RNA1509_25341} {RNA1509_25341, RNA815_15326} |