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Results for MligTC455_18878

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18878 589 12.27 Mlig455_030925

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.176/0.03143

 PPP4R2 Mlig455_030925 {REF} {Length: 2928} {Pfam: PPP4R2 [PF09184.13, score=127.0]} {Human: ENSG00000163605, PPP4R2, protein phosphatase 4 regulatory subunit 2, [RH, Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000052144, Ppp4r2, protein phosphatase 4, regulatory subunit 2, [RH, Score=91.7, Expect=6e-20]} {Dmel: FBgn0030208, PPP4R2r, Protein phosphatase 4 regulatory subunit 2-related protein, [RH, Score=116, Expect=3e-28]} {Celegans: WBGene00017064, ppfr-2, Protein Phosphatase Four Regulatory subunit, [RH, Score=65.5, Expect=1e-11]} {Smed: dd_Smed_v6_4200_0_1, dd_Smed_v6_4200_0_1, [RH, Score=96.7, Expect=6e-22]} {RNA1509_7609} {RNA1310_15014.1} {RNA815_6398.1}

Cumulative graph for MligTC455_18878

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.555 4.033 0.02671 0.42816
RegionR2 0.487 4.033 0.44075 0.82997
RegionR3 0.683 4.033 0.16276 0.68273
RegionR4 -0.545 4.033 0.38186 0.70654
RegionR5 1.176 4.033 0.00440 0.03143
RegionR6 0.492 4.033 0.31843 0.90703
RegionR7 0.571 4.033 0.31208 0.94616
RegionR8 0.691 4.033 0.29802 0.92789

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.535 4.033 0.41335 1.00000
RegenerationR2 0.146 4.033 0.78900 0.98602
RegenerationR3 0.338 4.033 0.53974 0.87750
RegenerationR4 0.119 4.033 0.83352 0.99846
RegenerationR5 -0.487 4.033 0.33415 0.75405
RegenerationR6 0.875 4.033 0.10622 0.40409
RegenerationBL 0.196 4.033 0.76348 1.00000
RegenerationTP 0.549 4.033 0.39547 0.82594


Genes with expression patterns similar to MligTC455_18878

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18878 589 12.27 Mlig455_030925

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.176/0.03143

 PPP4R2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_030925 {REF} {Length: 2928} {Pfam: PPP4R2 [PF09184.13, score=127.0]} {Human: ENSG00000163605, PPP4R2, protein phosphatase 4 regulatory subunit 2, [RH, Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000052144, Ppp4r2, protein phosphatase 4, regulatory subunit 2, [RH, Score=91.7, Expect=6e-20]} {Dmel: FBgn0030208, PPP4R2r, Protein phosphatase 4 regulatory subunit 2-related protein, [RH, Score=116, Expect=3e-28]} {Celegans: WBGene00017064, ppfr-2, Protein Phosphatase Four Regulatory subunit, [RH, Score=65.5, Expect=1e-11]} {Smed: dd_Smed_v6_4200_0_1, dd_Smed_v6_4200_0_1, [RH, Score=96.7, Expect=6e-22]} {RNA1509_7609} {RNA1310_15014.1} {RNA815_6398.1}
2. MligTC455_18359 696 14.49 Mlig455_040112

Neo: Int S/G2/M

Age: -

 LARP1 2.43 0.767 - - - 0.713 0.950 Mlig455_040112 {REF} {Length: 4967} {TRANSSPLICED} {Pfam: La domain [PF05383.19, score=67.0]} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [RH, Score=333, Expect=1e-96]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [RH, Score=327, Expect=2e-94]} {Dmel: FBgn0261618, larp, La related protein, [RH, Score=252, Expect=5e-68]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [RH, Score=181, Expect=4e-46]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [RH, Score=217, Expect=8e-58]} {RNA1509_10782, RNA1509_14249, RNA1509_29675, RNA1509_54482} {RNA1310_8037.1, RNA1509_14249, RNA1509_29675, RNA1509_54482} {RNA1509_14249, RNA1509_29675, RNA1509_54482, RNA815_4685}
3. MligTC455_49048 666 13.88 Mlig455_036523, Mlig455_069129

Neo: Irradiation

Age: -

Region-enriched R5: 1.982/0.00001

 CSNK2B 1.761 0.811 - - 0.950 - -

Mlig455_036523 {REF} {Length: 2520} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=252.8]} {Human: ENSG00000224398, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000204435, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [Score=338, Expect=9e-119]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [Score=328, Expect=6e-115]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [Score=303, Expect=4e-105]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [Score=318, Expect=3e-111]} {RNA1509_17076} {RNA1310_24879, RNA1509_17076} {RNA1509_17076, RNA815_16826}

Mlig455_069129 {REF} {Length: 2748} {TRANSSPLICED} {Pfam: Casein kinase II regulatory subunit [PF01214.20, score=252.8]} {Human: ENSG00000224398, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000228875, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000204435, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000224774, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000206406, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000230700, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]; ENSG00000232960, CSNK2B, casein kinase 2 beta, [Score=338, Expect=1e-118]} {Mouse: ENSMUSG00000024387, Csnk2b, casein kinase 2, beta polypeptide, [Score=338, Expect=9e-119]} {Dmel: FBgn0000259, CkIIbeta, Casein kinase II beta subunit, [Score=328, Expect=6e-115]} {Celegans: WBGene00002196, kin-10, Casein kinase II subunit beta, [Score=303, Expect=4e-105]} {Smed: dd_Smed_v6_1428_0_1, dd_Smed_v6_1428_0_1, [Score=318, Expect=3e-111]} {RNA1509_17076, RNA1509_29133} {RNA1310_24879, RNA1509_29133} {RNA1509_29133, RNA815_16826}
4. MligTC455_53760 464 9.66 Mlig455_006918, Mlig455_017934

Neo: Irradiation

Age: -

Region-enriched R5: 1.536/0.01846

 PYGO2 1.746 0.794 - - 0.952 - -

Mlig455_006918 {REF} {Length: 4325} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=29.2]} {Human: ENSG00000163348, PYGO2, pygopus family PHD finger 2, [RH, Score=79.0, Expect=2e-16]} {Mouse: ENSMUSG00000047824, Pygo2, pygopus 2, [RH, Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_6971_0_1, dd_Smed_v6_6971_0_1, [RH, Score=62.8, Expect=9e-12]} {RNA1509_58925} {RNA1310_14134, RNA1509_58925} {RNA1509_58925, RNA815_20552}

Mlig455_017934 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=29.2]} {Human: ENSG00000163348, PYGO2, pygopus family PHD finger 2, [RH, Score=79.0, Expect=2e-16]} {Mouse: ENSMUSG00000047824, Pygo2, pygopus 2, [RH, Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_6971_0_1, dd_Smed_v6_6971_0_1, [RH, Score=62.8, Expect=9e-12]} {RNA1509_58925} {RNA1310_14134} {RNA815_20552}
5. MligTC455_48733 1013 21.11 Mlig455_036104

Neo: -

Age: -

Region-enriched R7: 1.603/0.00772

 MYL12B 0.967 - - - 0.967 - - Mlig455_036104 {REF} {Length: 988} {Pfam: EF-hand domain pair [PF13499.8, score=57.4]; EF-hand domain [PF13405.8, score=43.8]; EF hand [PF00036.34, score=36.8]; EF-hand domain pair [PF13833.8, score=30.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=30.3]; EF hand [PF13202.8, score=22.4]; SurA N-terminal domain [PF13623.8, score=22.0]; EF-hand domain [PF14658.8, score=20.7]} {Human: ENSG00000118680, MYL12B, myosin light chain 12B, [Score=196, Expect=2e-64]; ENSG00000101608, MYL12A, myosin light chain 12A, [Score=194, Expect=8e-64]; ENSG00000101335, MYL9, myosin light chain 9, [Score=192, Expect=3e-63]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [Score=196, Expect=1e-64]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [Score=196, Expect=1e-64]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [Score=194, Expect=1e-63]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [Score=192, Expect=3e-63]} {Dmel: FBgn0003514, sqh, spaghetti squash, [Score=196, Expect=1e-64]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [Score=196, Expect=6e-65]} {Smed: dd_Smed_v6_445_0_1, dd_Smed_v6_445_0_1, [RH, Score=262, Expect=4e-91]} {RNA1509_4429} {RNA1310_36767.1} {RNA815_17952}
6. MligTC455_48415 176 3.67 Mlig455_035974

Neo: -

Age: -

 0.961 - - - 0.961 - - Mlig455_035974 {REF} {Length: 1147} {RNA1509_35506} {RNA1310_32216} {RNA815_42269}
7. MligTC455_48026 559 11.65 Mlig455_017075

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.927/0.00289

 0.957 - - - - - 0.957 Mlig455_017075 {REF} {Length: 1459} {TRANSSPLICED} {Pfam: Small subunit of serine palmitoyltransferase-like [PF11779.10, score=45.5]} {Smed: dd_Smed_v6_10999_0_1, dd_Smed_v6_10999_0_1, [RH, Score=50.8, Expect=1e-08]} {RNA1509_26033} {RNA1310_42692} {RNA815_20573}
8. MligTC455_16778 196 4.07 Mlig455_000354

Neo: -

Age: -

 PRB3 0.956 - - - 0.956 - - Mlig455_000354 {REF} {Length: 2874} {Pfam: WH2 motif [PF02205.22, score=36.7]} {Human: ENSG00000197870, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]; ENSG00000275624, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]} {RNA1310_25422} {RNA815_34565}
9. MligTC455_52445 1003 20.9 Mlig455_057648

Neo: -

Age: -

Region-enriched R2: 1.800/0.00019

 TMEM165 0.955 - - - 0.955 - - Mlig455_057648 {REF} {Length: 1582} {Pfam: Uncharacterized protein family UPF0016 [PF01169.21, score=151.5]} {Human: ENSG00000134851, TMEM165, transmembrane protein 165, [RH, Score=314, Expect=3e-107]} {Mouse: ENSMUSG00000029234, Tmem165, transmembrane protein 165, [RH, Score=296, Expect=2e-100]} {Dmel: FBgn0260659, CG42542, [RH, Score=280, Expect=3e-94]} {Celegans: WBGene00021847, Y54F10AL.1, [RH, Score=285, Expect=8e-97]} {Smed: dd_Smed_v6_3586_0_1, dd_Smed_v6_3586_0_1, [RH, Score=288, Expect=1e-97]} {RNA1509_7155} {RNA1310_12257} {RNA815_3876.1}
10. MligTC455_16388 257 5.35 Mlig455_058972

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.463

Region-enriched R7: 2.896/0.00002

 0.952 - - - 0.952 - - Mlig455_058972 {REF} {Length: 1844} {RNA1509_38621} {RNA1310_17933.1, RNA1509_38621} {RNA1509_38621, RNA815_25414.1}

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