TomoSeq data search

Data search

Results for MligTC455_48733

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_48733

1013

21.11

Mlig455_036104

Neo: -

Age: -

Region-enriched R7: 1.603/0.00772

MYL12B

Mlig455_036104 {REF} {Length: 988} {Pfam: EF-hand domain pair [PF13499.8, score=57.4]; EF-hand domain [PF13405.8, score=43.8]; EF hand [PF00036.34, score=36.8]; EF-hand domain pair [PF13833.8, score=30.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=30.3]; EF hand [PF13202.8, score=22.4]; SurA N-terminal domain [PF13623.8, score=22.0]; EF-hand domain [PF14658.8, score=20.7]} {Human: ENSG00000118680, MYL12B, myosin light chain 12B, [Score=196, Expect=2e-64]; ENSG00000101608, MYL12A, myosin light chain 12A, [Score=194, Expect=8e-64]; ENSG00000101335, MYL9, myosin light chain 9, [Score=192, Expect=3e-63]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [Score=196, Expect=1e-64]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [Score=196, Expect=1e-64]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [Score=194, Expect=1e-63]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [Score=192, Expect=3e-63]} {Dmel: FBgn0003514, sqh, spaghetti squash, [Score=196, Expect=1e-64]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [Score=196, Expect=6e-65]} {Smed: dd_Smed_v6_445_0_1, dd_Smed_v6_445_0_1, [RH, Score=262, Expect=4e-91]} {RNA1509_4429} {RNA1310_36767.1} {RNA815_17952}

Cumulative graph for MligTC455_48733

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.164	4.516	0.24855	0.89474
RegionR2	0.4	4.516	0.44864	0.83673
RegionR3	-0.726	4.516	0.11645	0.59253
RegionR4	-1.074	4.516	0.04215	0.17174
RegionR5	-0.619	4.516	0.15419	0.41053
RegionR6	0.445	4.516	0.29470	0.88611
RegionR7	1.603	4.516	0.00014	0.00772
RegionR8	1.135	4.516	0.02902	0.33279

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.09	4.516	0.38495	1.00000
RegenerationR2	-1.145	4.516	0.02631	0.26842
RegenerationR3	-0.036	4.516	0.94901	1.00000
RegenerationR4	0.112	4.516	0.84387	1.00000
RegenerationR5	-0.328	4.516	0.54945	0.88559
RegenerationR6	-0.689	4.516	0.20914	0.55224
RegenerationBL	-1.015	4.516	0.06354	0.29278
RegenerationTP	-0.364	4.516	0.49656	0.89843

Genes with expression patterns similar to MligTC455_48733

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_48733	1013	21.11	Mlig455_036104	Neo: - Age: - Region-enriched R7: 1.603/0.00772	MYL12B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_036104 {REF} {Length: 988} {Pfam: EF-hand domain pair [PF13499.8, score=57.4]; EF-hand domain [PF13405.8, score=43.8]; EF hand [PF00036.34, score=36.8]; EF-hand domain pair [PF13833.8, score=30.8]; Uncharacterised protein family (UPF0154) [PF03672.15, score=30.3]; EF hand [PF13202.8, score=22.4]; SurA N-terminal domain [PF13623.8, score=22.0]; EF-hand domain [PF14658.8, score=20.7]} {Human: ENSG00000118680, MYL12B, myosin light chain 12B, [Score=196, Expect=2e-64]; ENSG00000101608, MYL12A, myosin light chain 12A, [Score=194, Expect=8e-64]; ENSG00000101335, MYL9, myosin light chain 9, [Score=192, Expect=3e-63]} {Mouse: ENSMUSG00000117098, AC154187.2, novel protein, [Score=196, Expect=1e-64]; ENSMUSG00000034868, Myl12b, myosin, light chain 12B, regulatory, [Score=196, Expect=1e-64]; ENSMUSG00000024048, Myl12a, myosin, light chain 12A, regulatory, non-sarcomeric, [Score=194, Expect=1e-63]; ENSMUSG00000067818, Myl9, myosin, light polypeptide 9, regulatory, [Score=192, Expect=3e-63]} {Dmel: FBgn0003514, sqh, spaghetti squash, [Score=196, Expect=1e-64]} {Celegans: WBGene00003372, mlc-4, Myosin regulatory light chain, [Score=196, Expect=6e-65]} {Smed: dd_Smed_v6_445_0_1, dd_Smed_v6_445_0_1, [RH, Score=262, Expect=4e-91]} {RNA1509_4429} {RNA1310_36767.1} {RNA815_17952}
2.	MligTC455_16778	196	4.07	Mlig455_000354	Neo: - Age: -	PRB3	1.814	-	-	0.840	0.974	-	-	Mlig455_000354 {REF} {Length: 2874} {Pfam: WH2 motif [PF02205.22, score=36.7]} {Human: ENSG00000197870, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]; ENSG00000275624, PRB3, proline rich protein BstNI subfamily 3, [RH, Score=56.2, Expect=6e-08]} {RNA1310_25422} {RNA815_34565}
3.	MligTC455_15762	2188	45.57	Mlig455_000167, Mlig455_000180	Neo: - Age: logFC(26M/2M)=-0.431 Region-enriched R2: 2.556/0.00158 Region-enriched R7: 1.552/0.03255		1.75	-	-	-	-	0.792	0.958	Mlig455_000167 {REF} {Length: 680} {RNA1509_11317} {RNA1310_80444} {RNA815_41569} Mlig455_000180 {REF} {Length: 678} {RNA1509_11317} {RNA1310_80444, RNA1509_11317} {RNA1509_11317, RNA815_41569}
4.	MligTC455_44648	177	3.69	Mlig455_013655	Neo: - Age: -		1.739	0.780	-	-	-	0.959	-	Mlig455_013655 {REF} {Length: 2045} {Pfam: Protein kinase domain [PF00069.27, score=24.6]} {RNA1509_54731} {RNA1310_1875.2} {RNA815_820}
5.	MligTC455_32300	256	5.34	Mlig455_036534	Neo: - Age: - Region-enriched R2: 2.018/0.04615		1.698	-	-	0.744	-	0.954	-	Mlig455_036534 {REF} {Length: 3738} {TRANSSPLICED} {Smed: dd_Smed_v6_5953_0_1, dd_Smed_v6_5953_0_1, [Score=88.2, Expect=4e-20]} {RNA1509_24553, RNA1509_27954} {RNA1310_25241.1, RNA1509_24553, RNA1509_27954} {RNA1509_24553, RNA1509_27954, RNA815_10356}
6.	MligTC455_14100	83	1.73	Mlig455_007430, Mlig455_023908, Mlig455_046498	Neo: - Age: -		1.692	0.735	-	-	-	0.957	-	Mlig455_007430 {REF} {Length: 1175} {NoTransDecoderORF} {RNA1310_41300} Mlig455_023908 {REF} {Length: 1180} {NoTransDecoderORF} {RNA1310_41300} Mlig455_046498 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1310_41300}
7.	MligTC455_26620	34	0.7	Mlig455_008129, Mlig455_008132	Neo: - Age: Up-Down-Down		0.978	-	-	-	-	0.978	-	Mlig455_008129 {REF} {Length: 1793} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1} Mlig455_008132 {REF} {Length: 2431} {NoTransDecoderORF} {RNA1509_17614} {RNA1310_15562} {RNA815_5625.1}
8.	MligTC455_28404	40	0.83	Mlig455_023211, Mlig455_064139	Neo: - Age: -		0.977	-	-	-	-	0.977	-	Mlig455_023211 {REF} {Length: 593} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=26.2]} {RNA1310_71559} Mlig455_064139 {REF} {Length: 3383} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=24.2]} {RNA1509_10472} {RNA1310_41467} {RNA815_52086}
9.	MligTC455_19761	138	2.87	Mlig455_014482	Neo: - Age: -	TLL1	0.973	-	-	-	-	0.973	-	Mlig455_014482 {REF} {Length: 2610} {Pfam: CUB domain [PF00431.22, score=133.6]; CUB-like domain [PF02408.22, score=39.7]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=88.2, Expect=2e-17]} {Mouse: ENSMUSG00000047517, Dmbt1, deleted in malignant brain tumors 1, [Score=139, Expect=2e-33]} {Dmel: FBgn0003719, tld, tolloid, [Score=59.7, Expect=6e-09]} {Celegans: WBGene00013855, ZC116.3, Probable cubilin, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=96.7, Expect=1e-20]} {RNA1509_60025} {RNA1310_15896, RNA1509_60025} {RNA1509_60025, RNA815_23387}
10.	MligTC455_18878	589	12.27	Mlig455_030925	Neo: Int S/G2/M Age: - Region-enriched R5: 1.176/0.03143	PPP4R2	0.967	-	-	-	0.967	-	-	Mlig455_030925 {REF} {Length: 2928} {Pfam: PPP4R2 [PF09184.13, score=127.0]} {Human: ENSG00000163605, PPP4R2, protein phosphatase 4 regulatory subunit 2, [RH, Score=90.9, Expect=2e-19]} {Mouse: ENSMUSG00000052144, Ppp4r2, protein phosphatase 4, regulatory subunit 2, [RH, Score=91.7, Expect=6e-20]} {Dmel: FBgn0030208, PPP4R2r, Protein phosphatase 4 regulatory subunit 2-related protein, [RH, Score=116, Expect=3e-28]} {Celegans: WBGene00017064, ppfr-2, Protein Phosphatase Four Regulatory subunit, [RH, Score=65.5, Expect=1e-11]} {Smed: dd_Smed_v6_4200_0_1, dd_Smed_v6_4200_0_1, [RH, Score=96.7, Expect=6e-22]} {RNA1509_7609} {RNA1310_15014.1} {RNA815_6398.1}
11.	MligTC455_35475	400	8.33	Mlig455_060729	Neo: - Age: -	RSU1	0.961	-	-	-	0.961	-	-	Mlig455_060729 {REF} {Length: 1955} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=78.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=55.9]; Leucine Rich Repeat [PF00560.35, score=37.6]} {Human: ENSG00000148484, RSU1, Ras suppressor protein 1, [RH, Score=288, Expect=3e-97]} {Mouse: ENSMUSG00000026727, Rsu1, Ras suppressor protein 1, [RH, Score=283, Expect=1e-95]} {Dmel: FBgn0028546, ics, icarus, [RH, Score=264, Expect=4e-88]} {Celegans: WBGene00007924, rsu-1, Ras SUppressor homolog, [RH, Score=261, Expect=1e-87]} {Smed: dd_Smed_v6_2259_0_1, dd_Smed_v6_2259_0_1, [RH, Score=269, Expect=1e-90]} {RNA1509_19119} {RNA1310_24445} {RNA815_8744}
12.	MligTC455_39838	117	2.44	Mlig455_061337, Mlig455_062688	Neo: - Age: Up-Down-Down Region-enriched R2: 5.720/0.01251	PROP1	0.96	-	-	-	-	0.960	-	Mlig455_061337 {REF} {Length: 2182} {Pfam: Homeodomain [PF00046.31, score=77.0]} {Human: ENSG00000175325, PROP1, PROP paired-like homeobox 1, [RH, Score=97.8, Expect=9e-23]; ENSG00000274382, PROP1, PROP paired-like homeobox 1, [RH, Score=97.8, Expect=9e-23]} {Mouse: ENSMUSG00000028736, Pax7, paired box 7, [Score=103, Expect=4e-23]; ENSMUSG00000036602, Alx1, ALX homeobox 1, [Score=102, Expect=4e-24]; ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=101, Expect=3e-23]; ENSMUSG00000035277, Arx, aristaless related homeobox, [Score=100, Expect=4e-22]; ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [Score=100, Expect=9e-23]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [Score=99.0, Expect=2e-22]} {Dmel: FBgn0052532, CG32532, [RH, Score=188, Expect=3e-55]} {Celegans: WBGene00006778, unc-42, [RH, Score=152, Expect=1e-42]} {Smed: dd_Smed_v6_21801_0_1, dd_Smed_v6_21801_0_1, [RH, Score=211, Expect=9e-63]} {RNA1310_35015.1} {RNA815_23154} Mlig455_062688 {REF} {Length: 2531} {Pfam: Homeodomain [PF00046.31, score=77.5]} {Human: ENSG00000274382, PROP1, PROP paired-like homeobox 1, [RH, Score=99.0, Expect=1e-23]; ENSG00000175325, PROP1, PROP paired-like homeobox 1, [RH, Score=99.0, Expect=1e-23]} {Mouse: ENSMUSG00000036602, Alx1, ALX homeobox 1, [Score=103, Expect=5e-25]; ENSMUSG00000028736, Pax7, paired box 7, [Score=103, Expect=5e-24]; ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=102, Expect=4e-24]; ENSMUSG00000040310, Alx4, aristaless-like homeobox 4, [Score=102, Expect=8e-24]; ENSMUSG00000035277, Arx, aristaless related homeobox, [Score=101, Expect=4e-23]; ENSMUSG00000014603, Alx3, aristaless-like homeobox 3, [Score=100, Expect=2e-23]; ENSMUSG00000004872, Pax3, paired box 3, [Score=99.4, Expect=2e-22]; ENSMUSG00000012520, Phox2b, paired-like homeobox 2b, [Score=98.2, Expect=7e-23]} {Dmel: FBgn0052532, CG32532, [RH, Score=189, Expect=2e-56]} {Celegans: WBGene00006778, unc-42, [RH, Score=155, Expect=1e-44]} {Smed: dd_Smed_v6_21801_0_1, dd_Smed_v6_21801_0_1, [RH, Score=212, Expect=2e-64]} {RNA1310_35015.1} {RNA815_23154}
13.	MligTC455_39836	51	1.07	Mlig455_024613	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_024613 {REF} {Length: 689} {NoTransDecoderORF} {RNA1310_136051} {RNA815_29792}
14.	MligTC455_24384	1090	22.71	Mlig455_012512, Mlig455_012598	Neo: - Age: - Region-enriched R7: 3.344/0.00000 Regeneration-downregulated BL: -2.703 Regeneration-depleted BL: -2.703	CPNE8	0.954	-	-	0.954	-	-	-	Mlig455_012512 {REF} {Length: 3415} {Pfam: Copine [PF07002.18, score=240.3]; C2 domain [PF00168.32, score=47.4]; vWA found in TerF C terminus [PF10138.11, score=20.9]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=405, Expect=3e-133]; ENSG00000144550, CPNE9, copine family member 9, [Score=402, Expect=6e-132]; ENSG00000124772, CPNE5, copine 5, [Score=394, Expect=2e-128]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=408, Expect=2e-134]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=404, Expect=7e-133]; ENSMUSG00000024008, Cpne5, copine V, [Score=393, Expect=4e-128]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=297, Expect=3e-91]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [Score=542, Expect=0.0]} {RNA1509_11237, RNA1509_41315} {RNA1310_10456.2, RNA1509_11237, RNA1509_41315} {RNA1509_11237, RNA1509_41315, RNA815_15820.1} Mlig455_012598 {REF} {Length: 3852} {Pfam: Copine [PF07002.18, score=243.3]; C2 domain [PF00168.32, score=50.6]; vWA found in TerF C terminus [PF10138.11, score=24.1]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=402, Expect=1e-132]; ENSG00000144550, CPNE9, copine family member 9, [Score=397, Expect=6e-131]; ENSG00000124772, CPNE5, copine 5, [Score=389, Expect=5e-127]; ENSG00000140848, CPNE2, copine 2, [Score=386, Expect=2e-126]} {Mouse: ENSMUSG00000030270, Cpne9, copine family member IX, [Score=404, Expect=2e-133]; ENSMUSG00000052560, Cpne8, copine VIII, [Score=401, Expect=3e-132]; ENSMUSG00000024008, Cpne5, copine V, [Score=387, Expect=2e-126]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=296, Expect=3e-91]} {Smed: dd_Smed_v6_13873_0_1, dd_Smed_v6_13873_0_1, [Score=545, Expect=0.0]} {RNA1509_11237} {RNA1310_10456.1} {RNA815_15820.1}
15.	MligTC455_44281	456	9.5	Mlig455_068996	Neo: - Age: -	ANPEP	0.952	-	-	-	0.952	-	-	Mlig455_068996 {REF} {Length: 3001} {Pfam: Peptidase family M1 domain [PF01433.22, score=209.7]; ERAP1-like C-terminal domain [PF11838.10, score=183.2]; Peptidase M1 N-terminal domain [PF17900.3, score=52.5]} {Human: ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=234, Expect=6e-66]; ENSG00000141279, NPEPPS, aminopeptidase puromycin sensitive, [Score=232, Expect=2e-65]; ENSG00000138792, ENPEP, glutamyl aminopeptidase, [Score=229, Expect=2e-64]; ENSG00000164308, ERAP2, endoplasmic reticulum aminopeptidase 2, [Score=228, Expect=9e-64]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=227, Expect=2e-63]} {Mouse: ENSMUSG00000001441, Npepps, aminopeptidase puromycin sensitive, [Score=232, Expect=4e-67]; ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=226, Expect=5e-63]; ENSMUSG00000028024, Enpep, glutamyl aminopeptidase, [Score=226, Expect=2e-66]; ENSMUSG00000021583, Erap1, endoplasmic reticulum aminopeptidase 1, [Score=224, Expect=1e-62]; ENSMUSG00000039062, Anpep, alanyl (membrane) aminopeptidase, [Score=223, Expect=3e-62]} {Dmel: FBgn0039656, CG11951, [Score=283, Expect=1e-84]} {Celegans: WBGene00011587, T07F10.1, Aminopeptidase, [Score=215, Expect=1e-59]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=256, Expect=5e-74]} {RNA1509_48214, RNA1509_6569} {RNA1310_3710.1, RNA1509_48214} {RNA1509_48214, RNA815_5591.1}
16.	MligTC455_33881	86	1.79	Mlig455_055940	Neo: Irradiation Age: -		0.951	-	-	-	0.951	-	-	Mlig455_055940 {REF} {Length: 3205} {TRANSSPLICED} {RNA1509_43467} {RNA1310_23763, RNA1509_43467} {RNA1509_43467, RNA815_10205}
17.	MligTC455_41514	1231	25.64	Mlig455_022657, Mlig455_022666, Mlig455_022676	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R4: 1.815/0.00175 Region-enriched R5: 1.778/0.00010		0.951	-	-	-	0.951	-	-	Mlig455_022657 {REF} {Length: 874} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911} {RNA815_19732} Mlig455_022666 {REF} {Length: 870} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911, RNA1509_11728} {RNA1509_11728, RNA815_19732} Mlig455_022676 {REF} {Length: 874} {TRANSSPLICED} {RNA1509_11728} {RNA1310_43911} {RNA815_19732}

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