Data search


search
Exact
Search

Results for MligTC455_18884

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18884 134 2.79 Mlig455_026109

Neo: -

Age: Down-Up-Down

Mlig455_026109 {REF} {Length: 2729} {TRANSSPLICED} {Pfam: Protein phosphatase 1 regulatory subunit 35 C-terminus [PF15503.8, score=22.6]} {RNA1509_42732} {RNA1310_2620} {RNA815_4895}

Cumulative graph for MligTC455_18884

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.581 2.192 0.93820 1.00000
RegionR2 1.441 2.192 0.13077 0.44868
RegionR3 0.7 2.192 0.32417 0.86155
RegionR4 -0.707 2.192 0.94973 1.00000
RegionR5 1.203 2.192 0.06031 0.21405
RegionR6 1.335 2.192 0.07374 0.50490
RegionR7 -4.934 2.192 0.04413 0.40354
RegionR8 1.542 2.192 0.20703 0.80834

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.702 2.192 0.57026 1.00000
RegenerationR2 0.096 2.192 0.87723 1.00000
RegenerationR3 0.243 2.192 0.72951 0.95749
RegenerationR4 0.554 2.192 0.45725 0.84576
RegenerationR5 -0.537 2.192 0.35790 0.76981
RegenerationR6 -0.294 2.192 0.67115 0.90922
RegenerationBL 2.5 2.192 0.03547 0.21217
RegenerationTP 0.942 2.192 0.55282 0.93527


Genes with expression patterns similar to MligTC455_18884

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18884 134 2.79 Mlig455_026109

Neo: -

Age: Down-Up-Down

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_026109 {REF} {Length: 2729} {TRANSSPLICED} {Pfam: Protein phosphatase 1 regulatory subunit 35 C-terminus [PF15503.8, score=22.6]} {RNA1509_42732} {RNA1310_2620} {RNA815_4895}
2. MligTC455_32863 188 3.91 Mlig455_028353

Neo: Int S/G2/M

Age: Up-Up-Down

1.849 - - 0.885 - - 0.964 Mlig455_028353 {REF} {Length: 1978} {TRANSSPLICED} {RNA1509_40955} {RNA1310_60768} {RNA815_8954.1}
3. MligTC455_21390 470 9.8 Mlig455_013297, Mlig455_050507

Neo: -

Age: -

1.78 - - 0.964 - - 0.816

Mlig455_013297 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=51.6]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=2e-34]} {RNA1509_33360} {RNA1310_24109.1} {RNA815_9543}

Mlig455_050507 {REF} {Length: 1891} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=51.6]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=129, Expect=1e-34]} {RNA1509_33360} {RNA1310_24109.3} {RNA815_9543}
4. MligTC455_37542 365 7.6 Mlig455_032121

Neo: -

Age: Down-Up-Up

Region-enriched R5: 1.755/0.02582

1.699 - 0.745 - - - 0.954 Mlig455_032121 {REF} {Length: 1646} {TRANSSPLICED} {RNA1509_31812, RNA1509_57440} {RNA1310_17682, RNA1509_31812, RNA1509_57440} {RNA1509_31812, RNA1509_57440, RNA815_43178}
5. MligTC455_49081 472 9.84 Mlig455_068529

Neo: -

Age: -

Region-enriched R5: 1.779/0.02721

CANX 1.685 - 0.726 - - - 0.959 Mlig455_068529 {REF} {Length: 2120} {TRANSSPLICED} {Pfam: Calreticulin family [PF00262.20, score=463.2]} {Human: ENSG00000127022, CANX, calnexin, [Score=479, Expect=5e-163]; ENSG00000283777, CANX, calnexin, [Score=479, Expect=5e-163]} {Mouse: ENSMUSG00000020368, Canx, calnexin, [Score=468, Expect=1e-158]} {Dmel: FBgn0015622, Cnx99A, Calnexin 99A, [Score=402, Expect=4e-133]} {Celegans: WBGene00000567, cnx-1, Calnexin, [Score=391, Expect=1e-128]} {Smed: dd_Smed_v6_632_0_1, dd_Smed_v6_632_0_1, [Score=517, Expect=4e-178]} {RNA1509_44465} {RNA1310_13618.2} {RNA815_14640}
6. MligTC455_27985 52 1.07 Mlig455_060946

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.905

GRM2 1.665 - - 0.958 - - 0.707 Mlig455_060946 {REF} {Length: 7334} {Pfam: Receptor family ligand binding region [PF01094.30, score=193.9]; Periplasmic binding protein [PF13458.8, score=48.7]; Paxillin family [PF03535.15, score=22.4]} {Human: ENSG00000164082, GRM2, glutamate metabotropic receptor 2, [Score=75.5, Expect=4e-13]; ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000023192, Grm2, glutamate receptor, metabotropic 2, [Score=75.9, Expect=4e-13]; ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=73.2, Expect=3e-12]} {Dmel: FBgn0019985, mGluR, metabotropic Glutamate Receptor, [Score=70.5, Expect=1e-11]} {Celegans: WBGene00003233, mgl-2, Metabotropic GLutamate receptor family, [Score=61.6, Expect=6e-09]} {Smed: dd_Smed_v6_32826_0_1, dd_Smed_v6_32826_0_1, [Score=70.9, Expect=5e-12]} {RNA1509_24114} {RNA1310_2242} {RNA815_2427}
7. MligTC455_52445 1003 20.9 Mlig455_057648

Neo: -

Age: -

Region-enriched R2: 1.800/0.00019

TMEM165 1.658 - - 0.707 - - 0.951 Mlig455_057648 {REF} {Length: 1582} {Pfam: Uncharacterized protein family UPF0016 [PF01169.21, score=151.5]} {Human: ENSG00000134851, TMEM165, transmembrane protein 165, [RH, Score=314, Expect=3e-107]} {Mouse: ENSMUSG00000029234, Tmem165, transmembrane protein 165, [RH, Score=296, Expect=2e-100]} {Dmel: FBgn0260659, CG42542, [RH, Score=280, Expect=3e-94]} {Celegans: WBGene00021847, Y54F10AL.1, [RH, Score=285, Expect=8e-97]} {Smed: dd_Smed_v6_3586_0_1, dd_Smed_v6_3586_0_1, [RH, Score=288, Expect=1e-97]} {RNA1509_7155} {RNA1310_12257} {RNA815_3876.1}
8. MligTC455_08311 59 1.23 Mlig455_027019

Neo: -

Age: -

0.973 - - 0.973 - - - Mlig455_027019 {REF} {Length: 696} {NoTransDecoderORF} {RNA1509_42937} {RNA1310_5574.1} {RNA815_27436}
9. MligTC455_49626 298 6.21 Mlig455_048453, Mlig455_062723

Neo: -

Age: -

MRPL37 0.972 - - - - - 0.972

Mlig455_048453 {REF} {Length: 2492} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=44.0]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=6e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=103, Expect=1e-23]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.9, Expect=5e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=202, Expect=5e-60]} {RNA1509_9957} {RNA1310_18425} {RNA815_6967}

Mlig455_062723 {REF} {Length: 2856} {TRANSSPLICED} {Pfam: Mitochondrial 28S ribosomal protein S30 (PDCD9) [PF07147.14, score=43.6]} {Human: ENSG00000116221, MRPL37, mitochondrial ribosomal protein L37, [RH, Score=116, Expect=5e-28]} {Mouse: ENSMUSG00000028622, Mrpl37, mitochondrial ribosomal protein L37, [RH, Score=104, Expect=7e-24]} {Dmel: FBgn0261380, mRpL37, mitochondrial ribosomal protein L37, [RH, Score=70.5, Expect=7e-13]} {Smed: dd_Smed_v6_7564_0_1, dd_Smed_v6_7564_0_1, [RH, Score=201, Expect=1e-59]} {RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1310_18425, RNA1509_50196, RNA1509_50379, RNA1509_9957} {RNA1509_50196, RNA1509_50379, RNA1509_9957, RNA815_6967}
10. MligTC455_52707 78 1.62 Mlig455_006216

Neo: -

Age: -

0.971 - - 0.971 - - - Mlig455_006216 {REF} {Length: 1454} {NoTransDecoderORF} {RNA1310_25697}
11. MligTC455_06077 247 5.14 Mlig455_055739

Neo: -

Age: logFC(26M/2M)=0.224

Region-enriched R7: 2.476/0.03088

MTMR3 0.969 - - - - - 0.969 Mlig455_055739 {REF} {Length: 4369} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=343.3]; FYVE zinc finger [PF01363.23, score=57.7]} {Human: ENSG00000100330, MTMR3, myotubularin related protein 3, [RH, Score=297, Expect=3e-86]} {Mouse: ENSMUSG00000034354, Mtmr3, myotubularin related protein 3, [RH, Score=295, Expect=8e-86]} {Dmel: FBgn0030735, CG3632, [RH, Score=268, Expect=4e-76]} {Celegans: WBGene00003476, mtm-3, Myotubularin-related protein 3, [RH, Score=246, Expect=3e-69]} {Smed: dd_Smed_v6_5033_0_1, dd_Smed_v6_5033_0_1, [RH, Score=320, Expect=6e-98]} {RNA1509_52724, RNA1509_7741} {RNA1310_8154, RNA1509_52724, RNA1509_7741} {RNA1509_52724, RNA1509_7741, RNA815_2613}
12. MligTC455_50511 110 2.29 Mlig455_039703

Neo: -

Age: Up-Down-Up

HDAC11 0.968 - - - - - 0.968 Mlig455_039703 {REF} {Length: 1381} {TRANSSPLICED} {Pfam: Histone deacetylase domain [PF00850.21, score=162.9]} {Human: ENSG00000163517, HDAC11, histone deacetylase 11, [Score=369, Expect=2e-127]} {Mouse: ENSMUSG00000034245, Hdac11, histone deacetylase 11, [Score=368, Expect=3e-127]} {Dmel: FBgn0051119, HDAC11, Histone deacetylase 11, [RH, Score=326, Expect=7e-111]} {Celegans: WBGene00007953, hda-11, Histone DeAcetylase, [RH, Score=313, Expect=9e-106]} {Smed: dd_Smed_v6_3401_0_4, dd_Smed_v6_3401_0_4, [Score=303, Expect=3e-102]} {RNA1310_29298} {RNA815_14482}
13. MligTC455_09828 80 1.67 Mlig455_052764

Neo: -

Age: -

0.966 - - 0.966 - - - Mlig455_052764 {REF} {Length: 1206} {NoTransDecoderORF} {RNA1310_17510.1} {RNA815_9674}
14. MligTC455_40541 246 5.13 Mlig455_020101

Neo: -

Age: -

UBE3C 0.962 - - - - - 0.962 Mlig455_020101 {REF} {Length: 4310} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=262.7]} {Human: ENSG00000009335, UBE3C, ubiquitin protein ligase E3C, [RH, Score=384, Expect=2e-115]} {Mouse: ENSMUSG00000039000, Ube3c, ubiquitin protein ligase E3C, [RH, Score=364, Expect=3e-108]} {Dmel: FBgn0034989, CG3356, [RH, Score=352, Expect=6e-104]} {Celegans: WBGene00008429, etc-1, E3 ubiquitin-protein ligase etc-1, [RH, Score=255, Expect=2e-70]} {Smed: dd_Smed_v6_8915_0_1, dd_Smed_v6_8915_0_1, [RH, Score=318, Expect=5e-92]} {RNA1509_7273} {RNA1310_2336, RNA1509_7273} {RNA1509_7273, RNA815_688.1}
15. MligTC455_22933 497 10.36 Mlig455_043362

Neo: -

Age: -

CNPY2 0.96 - - - - - 0.960 Mlig455_043362 {REF} {Length: 2002} {TRANSSPLICED} {Pfam: TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=79.6]} {Human: ENSG00000257727, CNPY2, canopy FGF signaling regulator 2, [RH, Score=70.5, Expect=2e-14]; ENSG00000144785, AC073896.1, novel protein, [RH, Score=69.7, Expect=2e-13]} {Mouse: ENSMUSG00000025381, Cnpy2, canopy FGF signaling regulator 2, [RH, Score=68.2, Expect=1e-13]} {Celegans: WBGene00017169, F01F1.15, [Score=56.6, Expect=1e-09]} {RNA1509_46925, RNA1509_52897} {RNA1310_13660.1, RNA1509_46925, RNA1509_52897} {RNA1509_46925, RNA1509_52897, RNA815_7407.1}
16. MligTC455_24777 771 16.05 Mlig455_025811

Neo: -

Age: -

MPHOSPH8 0.957 - - - - - 0.957 Mlig455_025811 {REF} {Length: 6521} {TRANSSPLICED} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=42.9]; Ankyrin repeats (3 copies) [PF12796.9, score=34.4]; Ankyrin repeats (many copies) [PF13857.8, score=26.2]; Ankyrin repeat [PF13606.8, score=22.4]; Ankyrin repeats (many copies) [PF13637.8, score=19.4]} {Human: ENSG00000196199, MPHOSPH8, M-phase phosphoprotein 8, [Score=61.6, Expect=4e-09]} {Mouse: ENSMUSG00000079184, Mphosph8, M-phase phosphoprotein 8, [Score=60.5, Expect=7e-09]} {Smed: dd_Smed_v6_8167_0_1, dd_Smed_v6_8167_0_1, [Score=75.9, Expect=4e-14]} {RNA1509_13181, RNA1509_39397, RNA1509_43767, RNA1509_7403} {RNA1310_4948, RNA1509_13181, RNA1509_39397, RNA1509_43767, RNA1509_7403} {RNA1509_13181, RNA1509_39397, RNA1509_43767, RNA1509_7403, RNA815_1506}
17. MligTC455_23288 74 1.53 Mlig455_023036, Mlig455_023199

Neo: -

Age: -

Region-enriched R5: 2.838/0.04298

0.953 - - - - - 0.953

Mlig455_023036 {REF} {Length: 420} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22081} {RNA1310_6462.1} {RNA815_36424}

Mlig455_023199 {REF} {Length: 360} {NoTransDecoderORF} {RNA1509_57656} {RNA1310_6462.1} {RNA815_36424}
18. MligTC455_26302 103 2.15 Mlig455_042038

Neo: -

Age: -

0.953 - - 0.953 - - - Mlig455_042038 {REF} {Length: 2829} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=175.4]; Tetratricopeptide repeat [PF13424.8, score=29.5]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=130, Expect=2e-35]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=113, Expect=6e-29]} {RNA1509_29458} {RNA1310_28569} {RNA815_7911}
19. MligTC455_10671 173 3.61 Mlig455_047045

Neo: -

Age: -

0.952 - - - - - 0.952 Mlig455_047045 {REF} {Length: 556} {NoTransDecoderORF} {RNA1509_46837} {RNA1310_70419} {RNA815_23431}
20. MligTC455_23700 105 2.2 Mlig455_025292

Neo: Int S/G2/M

Age: -

PPIH 0.95 - - 0.950 - - - Mlig455_025292 {REF} {Length: 7148} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=149.9]; Tudor domain [PF00567.26, score=80.4]} {Human: ENSG00000171960, PPIH, peptidylprolyl isomerase H, [RH, Score=303, Expect=2e-94]} {Mouse: ENSMUSG00000060288, Ppih, peptidyl prolyl isomerase H, [RH, Score=303, Expect=1e-94]; ENSMUSG00000033036, Gm7879, predicted pseudogene 7879, [RH, Score=303, Expect=1e-94]} {Dmel: FBgn0033089, CG17266, [RH, Score=281, Expect=5e-87]} {Celegans: WBGene00000887, cyn-11, Peptidyl-prolyl cis-trans isomerase 11, [RH, Score=265, Expect=3e-81]} {Smed: dd_Smed_v6_2417_0_2, dd_Smed_v6_2417_0_2, [RH, Score=243, Expect=2e-74]} {RNA1509_5193} {RNA1310_607.1} {RNA815_311}
21. MligTC455_26221 67 1.39 Mlig455_032780

Neo: Irradiation

Age: -

BIRC3 0.95 - - - - - 0.950 Mlig455_032780 {REF} {Length: 3138} {TRANSSPLICED} {Pfam: Inhibitor of Apoptosis domain [PF00653.23, score=40.2]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.8]} {Human: ENSG00000023445, BIRC3, baculoviral IAP repeat containing 3, [Score=69.7, Expect=8e-12]; ENSG00000110330, BIRC2, baculoviral IAP repeat containing 2, [Score=68.9, Expect=1e-11]} {Mouse: ENSMUSG00000057367, Birc2, baculoviral IAP repeat-containing 2, [Score=65.1, Expect=1e-10]; ENSMUSG00000032000, Birc3, baculoviral IAP repeat-containing 3, [Score=62.8, Expect=4e-10]} {RNA1509_56370} {RNA1310_17686.1, RNA1509_56370} {RNA1509_56370, RNA815_17744}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA