Data search


search
Exact
Search

Results for MligTC455_18898

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18898 16 0.33 Mlig455_065083

Neo: -

Age: -

Mlig455_065083 {REF} {Length: 906} {NoTransDecoderORF} {RNA1310_56788}

Cumulative graph for MligTC455_18898

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.329 0.679 1.00000 1.00000
RegionR2 2.558 0.679 1.00000 1.00000
RegionR3 0.781 0.679 0.99952 1.00000
RegionR4 -1.968 0.679 0.99948 1.00000
RegionR5 -0.035 0.679 0.99965 1.00000
RegionR6 0.814 0.679 0.99957 1.00000
RegionR7 0.727 0.679 0.99988 1.00000
RegionR8 0.452 0.679 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.093 0.679 0.99975 1.00000
RegenerationR2 2.247 0.679 0.15096 0.58488
RegenerationR3 4.37 0.679 0.04483 0.37001
RegenerationR4 3.525 0.679 0.03703 0.31072
RegenerationR5 2.495 0.679 0.08298 0.44577
RegenerationR6 4.905 0.679 0.05713 0.29978
RegenerationBL 3.842 0.679 0.04625 0.24613
RegenerationTP 0.941 0.679 0.99972 1.00000


Genes with expression patterns similar to MligTC455_18898

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18898 16 0.33 Mlig455_065083

Neo: -

Age: -

1 - - - - 1.000 - Mlig455_065083 {REF} {Length: 906} {NoTransDecoderORF} {RNA1310_56788}
2. MligTC455_10777 85 1.77 Mlig455_055033, Mlig455_055050

Neo: -

Age: -

0.976 - - - - 0.976 -

Mlig455_055033 {REF} {Length: 705} {NoTransDecoderORF} {RNA1310_68766} {RNA815_37906}

Mlig455_055050 {REF} {Length: 705} {NoTransDecoderORF} {RNA1310_68766} {RNA815_37906}
3. MligTC455_33311 9 0.19 Mlig455_002561, Mlig455_057909

Neo: -

Age: Down-Up-Up

METTL7A 0.958 - - - - 0.958 -

Mlig455_002561 {REF} {Length: 1288} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=67.8]; Methyltransferase domain [PF13649.8, score=52.5]; Methyltransferase domain [PF13489.8, score=49.8]; Methyltransferase domain [PF08242.14, score=35.3]; Methyltransferase domain [PF13847.8, score=34.0]; ubiE/COQ5 methyltransferase family [PF01209.20, score=27.4]; Putative S-adenosyl-L-methionine-dependent methyltransferase [PF03141.18, score=19.8]; Hypothetical methyltransferase [PF05148.17, score=18.6]} {Human: ENSG00000185432, METTL7A, methyltransferase like 7A, [RH, Score=115, Expect=6e-31]} {Mouse: ENSMUSG00000058057, Mettl7a3, methyltransferase like 7A3, [RH, Score=112, Expect=7e-30]} {Celegans: WBGene00019198, strm-1, Sterol 4-C-methyltransferase strm-1, [Score=45.8, Expect=1e-05]} {RNA1509_18527} {RNA1310_70855} {RNA815_14775}

Mlig455_057909 {REF} {Length: 1515} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=67.8]; Methyltransferase domain [PF13649.8, score=52.5]; Methyltransferase domain [PF13489.8, score=49.2]; Methyltransferase domain [PF08242.14, score=35.3]; Methyltransferase domain [PF13847.8, score=33.9]; ubiE/COQ5 methyltransferase family [PF01209.20, score=27.4]; Putative S-adenosyl-L-methionine-dependent methyltransferase [PF03141.18, score=19.8]; Hypothetical methyltransferase [PF05148.17, score=18.6]} {Human: ENSG00000185432, METTL7A, methyltransferase like 7A, [RH, Score=110, Expect=5e-29]} {Mouse: ENSMUSG00000054619, Mettl7a1, methyltransferase like 7A1, [Score=112, Expect=8e-30]; ENSMUSG00000056487, Mettl7a2, methyltransferase like 7A2, [Score=107, Expect=1e-27]; ENSMUSG00000058057, Mettl7a3, methyltransferase like 7A3, [Score=107, Expect=7e-28]} {Celegans: WBGene00019198, strm-1, Sterol 4-C-methyltransferase strm-1, [Score=45.4, Expect=1e-05]} {RNA1509_17291} {RNA1310_33502} {RNA815_14775}
4. MligTC455_17442 76 1.59 Mlig455_046650, Mlig455_046672

Neo: -

Age: -

0.957 - - - - 0.957 -

Mlig455_046650 {REF} {Length: 2676} {RNA1310_43791} {RNA815_38592}

Mlig455_046672 {REF} {Length: 2830} {RNA1310_43791} {RNA815_38592}
5. MligTC455_31046 12 0.25 Mlig455_054928

Neo: -

Age: -

LRRN3 0.957 - - - - 0.957 - Mlig455_054928 {REF} {Length: 3787} {Pfam: Immunoglobulin domain [PF13927.8, score=35.6]; Immunoglobulin I-set domain [PF07679.18, score=34.7]; Immunoglobulin domain [PF00047.27, score=29.3]; Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=53.5, Expect=1e-06]} {Dmel: FBgn0032479, CG16974, [RH, Score=114, Expect=1e-25]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103}
6. MligTC455_40400 21 0.44 Mlig455_017027

Neo: -

Age: -

0.957 - - - - 0.957 - Mlig455_017027 {REF} {Length: 3642} {RNA1509_51520} {RNA1310_42231} {RNA815_27203}
7. MligTC455_36579 131 2.72 Mlig455_014597, Mlig455_070713

Neo: -

Age: -

0.956 - - - - 0.956 -

Mlig455_014597 {REF} {Length: 3153} {Pfam: CUB domain [PF00431.22, score=63.0]} {Mouse: ENSMUSG00000047517, Dmbt1, deleted in malignant brain tumors 1, [Score=75.1, Expect=2e-13]} {Celegans: WBGene00011222, R10H10.3, [Score=51.6, Expect=1e-06]} {RNA1509_49271, RNA1509_51650} {RNA1310_6091.1, RNA1509_49271, RNA1509_51650} {RNA1509_49271, RNA1509_51650, RNA815_14048.1}

Mlig455_070713 {REF} {Length: 2539} {RNA1509_51650} {RNA1310_6091.1} {RNA815_14048.1}
8. MligTC455_23679 4 0.08 Mlig455_011968

Neo: -

Age: -

MEIS3 0.952 - - - - 0.952 - Mlig455_011968 {REF} {Length: 2619} {TRANSSPLICED} {Pfam: Homeobox KN domain [PF05920.13, score=68.9]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=60.8]; Homeodomain [PF00046.31, score=34.1]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [Score=146, Expect=3e-39]; ENSG00000134138, MEIS2, Meis homeobox 2, [Score=144, Expect=1e-38]; ENSG00000160199, PKNOX1, PBX/knotted 1 homeobox 1, [Score=141, Expect=5e-37]} {Mouse: ENSMUSG00000006705, Pknox1, Pbx/knotted 1 homeobox, [Score=145, Expect=2e-38]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=144, Expect=1e-38]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=144, Expect=8e-39]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=138, Expect=1e-36]} {Dmel: FBgn0001235, hth, homothorax, [Score=102, Expect=3e-23]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=97.8, Expect=7e-22]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [RH, Score=204, Expect=8e-59]} {RNA1509_11055} {RNA1310_21005.1} {RNA815_8428.1}
9. MligTC455_39693 41 0.86 Mlig455_063193

Neo: -

Age: Up-Down-Down

MTCL1 0.951 - - - - 0.951 - Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429}
10. MligTC455_03936 12 0.24 Mlig455_060223, Mlig455_060238

Neo: -

Age: logFC(26M/2M)=-0.322

RXRA 0.95 - - - - 0.950 -

Mlig455_060223 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.0]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=1e-59]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=2e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=3e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=1e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=145, Expect=3e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=152, Expect=1e-41]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364}

Mlig455_060238 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=204, Expect=6e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=8e-60]; ENSG00000235712, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000231321, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000228333, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000206289, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000204231, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=2e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=2e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=146, Expect=1e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=155, Expect=6e-43]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364}
11. MligTC455_07572 8 0.16 Mlig455_030571

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_030571 {REF} {Length: 824} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA