M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_31046

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31046 12 0.25 Mlig455_054928

Neo: -

Age: -

 LRRN3 Mlig455_054928 {REF} {Length: 3787} {Pfam: Immunoglobulin domain [PF13927.8, score=35.6]; Immunoglobulin I-set domain [PF07679.18, score=34.7]; Immunoglobulin domain [PF00047.27, score=29.3]; Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=53.5, Expect=1e-06]} {Dmel: FBgn0032479, CG16974, [RH, Score=114, Expect=1e-25]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103}

Cumulative graph for MligTC455_31046

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.042 0.651 0.99996 1.00000
RegionR2 1.171 0.651 0.99985 1.00000
RegionR3 -1.105 0.651 1.00000 1.00000
RegionR4 1.326 0.651 0.99977 1.00000
RegionR5 0.568 0.651 1.00000 1.00000
RegionR6 -2.287 0.651 0.99991 1.00000
RegionR7 -1.408 0.651 0.99993 1.00000
RegionR8 0.692 0.651 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.681 0.651 0.99995 1.00000
RegenerationR2 -4.814 0.651 0.01371 0.19151
RegenerationR3 -0.221 0.651 1.00000 1.00000
RegenerationR4 -3.413 0.651 1.00000 1.00000
RegenerationR5 -2.243 0.651 1.00000 1.00000
RegenerationR6 1.4 0.651 1.00000 1.00000
RegenerationBL -2.692 0.651 0.99990 1.00000
RegenerationTP -1.812 0.651 0.99992 1.00000


Genes with expression patterns similar to MligTC455_31046

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31046 12 0.25 Mlig455_054928

Neo: -

Age: -

 LRRN3 2 - - 1.000 - 1.000 - Mlig455_054928 {REF} {Length: 3787} {Pfam: Immunoglobulin domain [PF13927.8, score=35.6]; Immunoglobulin I-set domain [PF07679.18, score=34.7]; Immunoglobulin domain [PF00047.27, score=29.3]; Apolipoprotein A1/A4/E domain [PF01442.20, score=20.1]} {Human: ENSG00000173114, LRRN3, leucine rich repeat neuronal 3, [Score=53.5, Expect=1e-06]} {Dmel: FBgn0032479, CG16974, [RH, Score=114, Expect=1e-25]} {RNA1509_10344} {RNA1310_3046.1} {RNA815_12103}
2. MligTC455_35483 22 0.45 Mlig455_056340

Neo: -

Age: -

 SETMAR 1.707 - - 0.751 - 0.956 - Mlig455_056340 {REF} {Length: 1741} {TRANSSPLICED} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.7]; HTH domain in Mos1 transposase [PF17906.3, score=29.5]; Transposase (partial DDE domain) [PF01359.20, score=28.0]; Homeodomain-like domain [PF13565.8, score=24.3]; Transposase [PF01498.20, score=23.6]; Winged helix-turn helix [PF13551.8, score=23.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=139, Expect=2e-36]} {Smed: dd_Smed_v6_14929_0_1, dd_Smed_v6_14929_0_1, [RH, Score=66.6, Expect=1e-13]} {RNA1509_36914} {RNA1310_11258.2} {RNA815_9389}
3. MligTC455_29656 41 0.86 Mlig455_046542

Neo: -

Age: -

 0.996 - - 0.996 - - - Mlig455_046542 {REF} {Length: 1535} {NoTransDecoderORF} {RNA1509_25000} {RNA1310_13919} {RNA815_45503.2}
4. MligTC455_41376 50 1.04 Mlig455_057140

Neo: -

Age: Up-Down-Up

 EGR1 0.99 - - 0.990 - - - Mlig455_057140 {REF} {Length: 3119} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=51.7]; Zinc-finger double domain [PF13465.8, score=50.3]; C2H2-type zinc finger [PF13894.8, score=38.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=23.3]; C2H2-type zinc finger [PF13912.8, score=21.2]} {Human: ENSG00000120738, EGR1, early growth response 1, [Score=159, Expect=3e-42]; ENSG00000179388, EGR3, early growth response 3, [Score=154, Expect=8e-42]} {Mouse: ENSMUSG00000038418, Egr1, early growth response 1, [Score=159, Expect=2e-42]; ENSMUSG00000033730, Egr3, early growth response 3, [Score=154, Expect=6e-42]} {Dmel: FBgn0003499, sr, stripe, [Score=159, Expect=2e-41]} {Celegans: WBGene00043705, egrh-2, EGR (Early Growth factor Response factor) Homolog, [Score=139, Expect=3e-39]} {Smed: dd_Smed_v6_7091_0_1, dd_Smed_v6_7091_0_1, [Score=132, Expect=4e-34]} {RNA1509_44884} {RNA1310_48721} {RNA815_42057}
5. MligTC455_23679 4 0.08 Mlig455_011968

Neo: -

Age: -

 MEIS3 0.989 - - - - 0.989 - Mlig455_011968 {REF} {Length: 2619} {TRANSSPLICED} {Pfam: Homeobox KN domain [PF05920.13, score=68.9]; N-terminal of Homeobox Meis and PKNOX1 [PF16493.7, score=60.8]; Homeodomain [PF00046.31, score=34.1]} {Human: ENSG00000105419, MEIS3, Meis homeobox 3, [Score=146, Expect=3e-39]; ENSG00000134138, MEIS2, Meis homeobox 2, [Score=144, Expect=1e-38]; ENSG00000160199, PKNOX1, PBX/knotted 1 homeobox 1, [Score=141, Expect=5e-37]} {Mouse: ENSMUSG00000006705, Pknox1, Pbx/knotted 1 homeobox, [Score=145, Expect=2e-38]; ENSMUSG00000027210, Meis2, Meis homeobox 2, [Score=144, Expect=1e-38]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=144, Expect=8e-39]; ENSMUSG00000020160, Meis1, Meis homeobox 1, [Score=138, Expect=1e-36]} {Dmel: FBgn0001235, hth, homothorax, [Score=102, Expect=3e-23]} {Celegans: WBGene00006796, unc-62, Homeobox protein unc-62, [Score=97.8, Expect=7e-22]} {Smed: dd_Smed_v6_8606_0_1, dd_Smed_v6_8606_0_1, [RH, Score=204, Expect=8e-59]} {RNA1509_11055} {RNA1310_21005.1} {RNA815_8428.1}
6. MligTC455_08696 9 0.19 Mlig455_068591

Neo: -

Age: -

 0.988 - - - - 0.988 - Mlig455_068591 {REF} {Length: 89} {NoTransDecoderORF} {RNA1509_22353} {RNA1310_3519} {RNA815_9210.1}
7. MligTC455_15182 24 0.49 Mlig455_008075

Neo: -

Age: -

 0.988 - - 0.988 - - - Mlig455_008075 {REF} {Length: 1623} {RNA1310_145272}
8. MligTC455_28270 163 3.39 Mlig455_016340, Mlig455_061673

Neo: -

Age: -

 0.988 - - 0.988 - - -

Mlig455_016340 {REF} {Length: 413} {NoTransDecoderORF} {RNA1509_6891} {RNA1310_55827} {RNA815_63327}

Mlig455_061673 {REF} {Length: 450} {NoTransDecoderORF} {RNA1509_6891} {RNA1310_55827} {RNA815_63327}
9. MligTC455_03660 11 0.23 Mlig455_053334

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_053334 {REF} {Length: 10438} {RNA1509_13570} {RNA1310_105265, RNA1509_13570}
10. MligTC455_15080 83 1.73 Mlig455_033906, Mlig455_033928

Neo: -

Age: -

 0.987 - - 0.987 - - -

Mlig455_033906 {REF} {Length: 664} {NoTransDecoderORF}

Mlig455_033928 {REF} {Length: 607}
11. MligTC455_55286 4 0.08 Mlig455_013528

Neo: -

Age: -

 TRHR 0.987 - - - - 0.987 - Mlig455_013528 {REF} {Length: 827} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=105.7]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=24.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=20.5]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=156, Expect=1e-44]} {Mouse: ENSMUSG00000038760, Trhr, thyrotropin releasing hormone receptor, [Score=154, Expect=8e-44]; ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=150, Expect=1e-42]} {Dmel: FBgn0038874, ETHR, [Score=101, Expect=3e-24]} {Celegans: WBGene00016265, trhr-1, Thyrotropin-Releasing Hormone Receptor, [Score=143, Expect=3e-40]} {Smed: dd_Smed_v6_19246_0_1, dd_Smed_v6_19246_0_1, [Score=157, Expect=5e-46]} {RNA1310_139198}
12. MligTC455_00534 9 0.19 Mlig455_046895

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_046895 {REF} {Length: 262} {NoTransDecoderORF}
13. MligTC455_08777 8 0.17 Mlig455_068101

Neo: -

Age: Down-Up-Down

 0.986 - - - - 0.986 - Mlig455_068101 {REF} {Length: 601} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54477} {RNA1310_61043} {RNA815_11673}
14. MligTC455_25061 16 0.34 Mlig455_013138

Neo: -

Age: logFC(26M/2M)=-0.554

 RASEF 0.986 - - - - 0.986 - Mlig455_013138 {REF} {Length: 3781} {Pfam: Ras family [PF00071.24, score=110.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=56.0]; EF-hand domain pair [PF13499.8, score=42.2]; EF hand [PF00036.34, score=41.5]; ADP-ribosylation factor family [PF00025.23, score=40.5]; EF-hand domain [PF13405.8, score=39.5]; EF-hand domain pair [PF13833.8, score=33.0]; EF hand [PF13202.8, score=29.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.7]} {Human: ENSG00000165105, RASEF, RAS and EF-hand domain containing, [Score=149, Expect=2e-36]} {Mouse: ENSMUSG00000043003, Rasef, RAS and EF hand domain containing, [Score=142, Expect=3e-35]} {Dmel: FBgn0285937, Rab1, [Score=93.2, Expect=2e-21]} {Celegans: WBGene00007067, 4R79.2, Rab-44, [Score=119, Expect=2e-29]} {Smed: dd_Smed_v6_4284_0_1, dd_Smed_v6_4284_0_1, [Score=171, Expect=4e-44]} {RNA1509_21698} {RNA1310_2939.1} {RNA815_9067}
15. MligTC455_41216 14 0.29 Mlig455_048411

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_048411 {REF} {Length: 1979} {NoTransDecoderORF} {RNA1310_52358}
16. MligTC455_03936 12 0.24 Mlig455_060223, Mlig455_060238

Neo: -

Age: logFC(26M/2M)=-0.322

 RXRA 0.985 - - - - 0.985 -

Mlig455_060223 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.0]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=1e-59]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=2e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=3e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=1e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=145, Expect=3e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=152, Expect=1e-41]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364}

Mlig455_060238 {REF} {Length: 1175} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=100.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=33.3]} {Human: ENSG00000186350, RXRA, retinoid X receptor alpha, [Score=204, Expect=6e-61]; ENSG00000143171, RXRG, retinoid X receptor gamma, [Score=200, Expect=1e-60]; ENSG00000227322, RXRB, retinoid X receptor beta, [Score=198, Expect=8e-60]; ENSG00000235712, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000231321, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000228333, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000206289, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]; ENSG00000204231, RXRB, retinoid X receptor beta, [Score=195, Expect=1e-56]} {Mouse: ENSMUSG00000015846, Rxra, retinoid X receptor alpha, [Score=205, Expect=3e-61]; ENSMUSG00000015843, Rxrg, retinoid X receptor gamma, [Score=202, Expect=2e-61]; ENSMUSG00000039656, Rxrb, retinoid X receptor beta, [Score=196, Expect=2e-58]} {Dmel: FBgn0003964, usp, ultraspiracle, [Score=147, Expect=2e-39]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [RH, Score=146, Expect=1e-39]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=155, Expect=6e-43]} {RNA1509_9759} {RNA1310_9134.2} {RNA815_45364}
17. MligTC455_07572 8 0.16 Mlig455_030571

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_030571 {REF} {Length: 824} {NoTransDecoderORF}
18. MligTC455_04858 23 0.48 Mlig455_024920

Neo: -

Age: Up-Down-Down

 0.983 - - - - 0.983 - Mlig455_024920 {REF} {Length: 3968} {Pfam: PMP-22/EMP/MP20/Claudin family [PF00822.22, score=23.5]} {Smed: dd_Smed_v6_20712_0_1, dd_Smed_v6_20712_0_1, [Score=62.0, Expect=5e-12]} {RNA1509_36367} {RNA1310_69230} {RNA815_43979}
19. MligTC455_10153 61 1.27 Mlig455_068250, Mlig455_068270

Neo: -

Age: -

 ERBB4 0.982 - - 0.982 - - -

Mlig455_068250 {REF} {Length: 5331} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=269.3]; Protein kinase domain [PF00069.27, score=110.9]; Receptor L domain [PF01030.26, score=51.2]; Growth factor receptor domain IV [PF14843.8, score=47.2]; Furin-like cysteine rich region [PF00757.22, score=45.7]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [Score=307, Expect=1e-85]; ENSG00000146648, EGFR, epidermal growth factor receptor, [Score=296, Expect=1e-82]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=309, Expect=2e-86]; ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [Score=295, Expect=4e-82]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=311, Expect=7e-87]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=209, Expect=2e-54]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=303, Expect=3e-84]} {RNA1509_1271} {RNA1310_65071} {RNA815_42809}

Mlig455_068270 {REF} {Length: 5369} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=271.6]; Protein kinase domain [PF00069.27, score=111.6]} {Human: ENSG00000178568, ERBB4, erb-b2 receptor tyrosine kinase 4, [Score=303, Expect=3e-89]; ENSG00000146648, EGFR, epidermal growth factor receptor, [Score=293, Expect=7e-86]} {Mouse: ENSMUSG00000062209, Erbb4, erb-b2 receptor tyrosine kinase 4, [Score=305, Expect=4e-90]; ENSMUSG00000020122, Egfr, epidermal growth factor receptor, [Score=291, Expect=2e-85]} {Dmel: FBgn0003731, Egfr, Epidermal growth factor receptor, [Score=288, Expect=5e-84]} {Celegans: WBGene00002299, let-23, Receptor tyrosine-protein kinase let-23, [Score=207, Expect=3e-56]} {Smed: dd_Smed_v6_11310_0_1, dd_Smed_v6_11310_0_1, [Score=300, Expect=5e-88]} {RNA1509_1271} {RNA1310_65071} {RNA815_42809}
20. MligTC455_13739 27 0.57 Mlig455_003060

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.158

 GLUL 0.98 - - 0.980 - - - Mlig455_003060 {REF} {Length: 3073} {Pfam: Glutamine synthetase, beta-Grasp domain [PF03951.21, score=49.3]; Glutamine synthetase, catalytic domain [PF00120.26, score=46.0]} {Human: ENSG00000135821, GLUL, glutamate-ammonia ligase, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000026473, Glul, glutamate-ammonia ligase (glutamine synthetase), [RH, Score=522, Expect=0.0]} {Dmel: FBgn0001145, Gs2, Glutamine synthetase 2, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00001604, gln-3, Glutamine synthetase, [RH, Score=530, Expect=0.0]} {Smed: dd_Smed_v6_646_0_1, dd_Smed_v6_646_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3029, RNA1509_54181, RNA1509_7928} {RNA1310_32301, RNA1509_3029, RNA1509_54181, RNA1509_7928}
21. MligTC455_08202 22 0.46 Mlig455_046373

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_046373 {REF} {Length: 280} {NoTransDecoderORF} {RNA1310_80724} {RNA815_19863}
22. MligTC455_21415 38 0.78 Mlig455_030394, Mlig455_069019

Neo: -

Age: Up-Down-Down

 SCN5A 0.978 - - 0.978 - - -

Mlig455_030394 {REF} {Length: 6394} {Pfam: Ion transport protein [PF00520.33, score=542.0]; Polycystin cation channel [PF08016.14, score=81.1]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=26.0]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=944, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=910, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=942, Expect=0.0]; ENSMUSG00000001027, Scn4a, sodium channel, voltage-gated, type IV, alpha, [RH, Score=932, Expect=0.0]; ENSMUSG00000023033, Scn8a, sodium channel, voltage-gated, type VIII, alpha, [RH, Score=924, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=896, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=2e-90]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1238, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}

Mlig455_069019 {REF} {Length: 6623} {Pfam: Ion transport protein [PF00520.33, score=774.7]; Polycystin cation channel [PF08016.14, score=76.9]; Voltage-dependent L-type calcium channel, IQ-associated [PF16905.7, score=25.2]} {Human: ENSG00000183873, SCN5A, sodium voltage-gated channel alpha subunit 5, [RH, Score=1268, Expect=0.0]; ENSG00000185313, SCN10A, sodium voltage-gated channel alpha subunit 10, [RH, Score=1214, Expect=0.0]} {Mouse: ENSMUSG00000032511, Scn5a, sodium channel, voltage-gated, type V, alpha, [RH, Score=1276, Expect=0.0]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [RH, Score=899, Expect=0.0]} {Celegans: WBGene00001187, egl-19, Voltage-dependent L-type calcium channel subunit alpha, [Score=322, Expect=9e-89]} {Smed: dd_Smed_v6_12243_0_1, dd_Smed_v6_12243_0_1, [Score=1233, Expect=0.0]} {RNA1509_26911} {RNA1310_25124} {RNA815_23541}
23. MligTC455_13899 14 0.29 Mlig455_007781

Neo: -

Age: Up-Down-Up

 CACNA1H 0.976 - - - - 0.976 - Mlig455_007781 {REF} {Length: 6753} {Pfam: Ion transport protein [PF00520.33, score=786.6]; Polycystin cation channel [PF08016.14, score=57.8]; FAM176 family [PF14851.8, score=19.4]} {Human: ENSG00000196557, CACNA1H, calcium voltage-gated channel subunit alpha1 H, [RH, Score=1032, Expect=0.0]; ENSG00000006283, CACNA1G, calcium voltage-gated channel subunit alpha1 G, [RH, Score=1006, Expect=0.0]} {Mouse: ENSMUSG00000024112, Cacna1h, calcium channel, voltage-dependent, T type, alpha 1H subunit, [RH, Score=1035, Expect=0.0]; ENSMUSG00000020866, Cacna1g, calcium channel, voltage-dependent, T type, alpha 1G subunit, [RH, Score=1003, Expect=0.0]} {Dmel: FBgn0264386, Ca-alpha1T, Ca[2+]-channel protein alpha[[1]] subunit T, [RH, Score=862, Expect=0.0]} {Celegans: WBGene00000367, cca-1, Voltage-dependent T-type calcium channel subunit alpha, [RH, Score=758, Expect=0.0]} {Smed: dd_Smed_v6_14730_0_1, dd_Smed_v6_14730_0_1, [RH, Score=1701, Expect=0.0]} {RNA1509_48619} {RNA1310_5687} {RNA815_28647}
24. MligTC455_12013 25 0.52 Mlig455_011463

Neo: -

Age: -

 0.969 - - 0.969 - - - Mlig455_011463 {REF} {Length: 826} {NoTransDecoderORF} {RNA1310_97403}
25. MligTC455_25786 72 1.5 Mlig455_040831

Neo: -

Age: -

Region-enriched R4: 4.547/0.02758

 PHKG1 0.969 - - 0.969 - - - Mlig455_040831 {REF} {Length: 3417} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=243.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.0]; Kinase-like [PF14531.8, score=25.6]; Haspin like kinase domain [PF12330.10, score=24.4]; Phosphotransferase enzyme family [PF01636.25, score=19.7]; Fungal protein kinase [PF17667.3, score=19.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.2]} {Human: ENSG00000164776, PHKG1, phosphorylase kinase catalytic subunit gamma 1, [RH, Score=372, Expect=5e-127]; ENSG00000156873, PHKG2, phosphorylase kinase catalytic subunit gamma 2, [RH, Score=361, Expect=2e-122]} {Mouse: ENSMUSG00000025537, Phkg1, phosphorylase kinase gamma 1, [RH, Score=365, Expect=2e-124]; ENSMUSG00000030815, Phkg2, phosphorylase kinase, gamma 2 (testis), [RH, Score=363, Expect=1e-123]} {Dmel: FBgn0011754, PhKgamma, Phosphorylase kinase gamma, [RH, Score=385, Expect=2e-132]} {Celegans: WBGene00021753, Y50D7A.3, [RH, Score=314, Expect=2e-103]} {Smed: dd_Smed_v6_7480_0_2, dd_Smed_v6_7480_0_2, [Score=218, Expect=5e-66]} {RNA1509_58909} {RNA1310_10334.1, RNA1509_58909} {RNA1509_58909, RNA815_18526}
26. MligTC455_49932 27 0.57 Mlig455_067660

Neo: -

Age: -

Region-enriched R2: 5.207/0.00812

 0.969 - - 0.969 - - - Mlig455_067660 {REF} {Length: 2168} {RNA1310_116606}
27. MligTC455_56260 12 0.25 Mlig455_006491

Neo: -

Age: -

 0.969 - - - - 0.969 - Mlig455_006491 {REF} {Length: 588} {NoTransDecoderORF} {RNA1310_98545}
28. MligTC455_04548 10 0.21 Mlig455_047007

Neo: -

Age: -

 TYMP 0.968 - - - - 0.968 - Mlig455_047007 {REF} {Length: 1462} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_15453} {RNA815_1859}
29. MligTC455_51716 160 3.34 Mlig455_070217

Neo: -

Age: Up-Down-Down

 0.964 - - - - 0.964 - Mlig455_070217 {REF} {Length: 2635} {RNA1509_54215} {RNA1310_88667, RNA1509_54215} {RNA1509_54215, RNA815_36352}
30. MligTC455_21498 17 0.36 Mlig455_020602

Neo: -

Age: -

 GRIK2 0.963 - - 0.963 - - - Mlig455_020602 {REF} {Length: 2918} {Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=41.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=36.9]} {Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=65.1, Expect=2e-10]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=63.5, Expect=5e-10]} {Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=65.5, Expect=9e-11]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=63.5, Expect=3e-10]} {Dmel: FBgn0004620, GluRIIA, Glutamate receptor IIA, [Score=54.7, Expect=1e-07]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=51.2, Expect=1e-06]} {Smed: dd_Smed_v6_20242_0_1, dd_Smed_v6_20242_0_1, [Score=51.2, Expect=1e-06]} {RNA1310_56126} {RNA815_40955}
31. MligTC455_34874 4 0.09 Mlig455_017496

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_017496 {REF} {Length: 1002} {NoTransDecoderORF} {RNA1509_52469} {RNA1310_33267} {RNA815_18908}
32. MligTC455_44868 14 0.3 Mlig455_051869, Mlig455_053148

Neo: -

Age: -

 CALM1, CALM2 0.962 - - 0.962 - - -

Mlig455_051869 {REF} {Length: 320} {Pfam: EF hand [PF00036.34, score=79.1]; EF-hand domain pair [PF13499.8, score=77.0]; EF-hand domain pair [PF13833.8, score=75.0]; EF hand [PF13202.8, score=66.9]; EF-hand domain [PF13405.8, score=65.8]; EF-hand domain [PF14658.8, score=30.2]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=21.9]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=103, Expect=1e-28]; ENSG00000198668, CALM1, calmodulin 1, [Score=102, Expect=3e-29]; ENSG00000160014, CALM3, calmodulin 3, [Score=102, Expect=3e-29]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=102, Expect=2e-29]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=102, Expect=6e-29]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=102, Expect=6e-29]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=103, Expect=3e-29]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=102, Expect=9e-30]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=102, Expect=2e-29]} {RNA1509_22382} {RNA1310_25980} {RNA815_41318}

Mlig455_053148 {REF} {Length: 916} {Pfam: EF-hand domain pair [PF13499.8, score=114.2]; EF hand [PF00036.34, score=114.0]; EF-hand domain [PF13405.8, score=97.8]; EF-hand domain pair [PF13833.8, score=92.0]; EF hand [PF13202.8, score=81.7]; EF-hand domain [PF14658.8, score=53.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=32.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.7]; Caleosin related protein [PF05042.15, score=27.0]; Tellurite resistance protein TerB [PF05099.15, score=19.6]} {Human: ENSG00000198668, CALM1, calmodulin 1, [Score=172, Expect=2e-55]; ENSG00000160014, CALM3, calmodulin 3, [Score=172, Expect=2e-55]; ENSG00000143933, CALM2, calmodulin 2, [Score=172, Expect=2e-55]} {Mouse: ENSMUSG00000019370, Calm3, calmodulin 3, [Score=172, Expect=1e-55]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=172, Expect=1e-55]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=172, Expect=1e-55]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=172, Expect=5e-56]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=172, Expect=4e-56]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=172, Expect=3e-56]} {RNA1509_22382} {RNA1310_25980} {RNA815_41318}
33. MligTC455_17442 76 1.59 Mlig455_046650, Mlig455_046672

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_046650 {REF} {Length: 2676} {RNA1310_43791} {RNA815_38592}

Mlig455_046672 {REF} {Length: 2830} {RNA1310_43791} {RNA815_38592}
34. MligTC455_23548 13 0.28 Mlig455_029881

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_029881 {REF} {Length: 2293} {RNA1310_58945} {RNA815_43403}
35. MligTC455_43141 147 3.07 Mlig455_047586

Neo: -

Age: logFC(26M/2M)=0.637

 GNAS 0.961 - - 0.961 - - - Mlig455_047586 {REF} {Length: 2108} {Pfam: G-protein alpha subunit [PF00503.22, score=344.4]; ADP-ribosylation factor family [PF00025.23, score=59.9]; Gtr1/RagA G protein conserved region [PF04670.14, score=25.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=20.2]} {Human: ENSG00000087460, GNAS, GNAS complex locus, [RH, Score=520, Expect=0.0]; ENSG00000141404, GNAL, G protein subunit alpha L, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000024524, Gnal, guanine nucleotide binding protein, alpha stimulating, olfactory type, [RH, Score=523, Expect=0.0]; ENSMUSG00000027523, Gnas, GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus, [RH, Score=519, Expect=0.0]} {Dmel: FBgn0001123, Galphas, G protein alpha s subunit, [RH, Score=518, Expect=0.0]} {Celegans: WBGene00001745, gsa-1, G protein, Subunit Alpha, [RH, Score=476, Expect=2e-168]} {Smed: dd_Smed_v6_6167_0_1, dd_Smed_v6_6167_0_1, [RH, Score=547, Expect=0.0]} {RNA1509_55942} {RNA1310_13501} {RNA815_7904}
36. MligTC455_47765 12 0.25 Mlig455_068551

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_068551 {REF} {Length: 4208} {RNA1509_51612} {RNA1310_8696} {RNA815_20831}
37. MligTC455_39939 498 10.37 Mlig455_023795, Mlig455_066344

Neo: Int S/G2/M

Age: -

Region-enriched R2: 2.254/0.04221

 IMPAD1 0.96 - - 0.960 - - -

Mlig455_023795 {REF} {Length: 5670} {TRANSSPLICED} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.0]; GWT1 [PF06423.14, score=63.5]; GlcNAc-PI de-N-acetylase [PF02585.19, score=59.3]} {Human: ENSG00000104331, IMPAD1, inositol monophosphatase domain containing 1, [RH, Score=154, Expect=3e-40]} {Mouse: ENSMUSG00000066324, Impad1, inositol monophosphatase domain containing 1, [RH, Score=151, Expect=2e-39]} {Dmel: FBgn0030465, CG15743, [RH, Score=168, Expect=2e-45]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [RH, Score=143, Expect=6e-36]} {Smed: dd_Smed_v6_9579_0_1, dd_Smed_v6_9579_0_1, [RH, Score=135, Expect=8e-34]} {RNA1509_37543, RNA1509_48069} {RNA1310_8844, RNA1509_48069} {RNA1509_48069, RNA815_11962}

Mlig455_066344 {REF} {Length: 4479} {TRANSSPLICED} {Pfam: Inositol monophosphatase family [PF00459.27, score=125.4]; GWT1 [PF06423.14, score=63.6]; GlcNAc-PI de-N-acetylase [PF02585.19, score=59.1]} {Human: ENSG00000104331, IMPAD1, inositol monophosphatase domain containing 1, [RH, Score=152, Expect=2e-39]} {Mouse: ENSMUSG00000066324, Impad1, inositol monophosphatase domain containing 1, [RH, Score=148, Expect=1e-38]} {Dmel: FBgn0030465, CG15743, [RH, Score=165, Expect=2e-44]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [RH, Score=143, Expect=8e-36]} {Smed: dd_Smed_v6_9579_0_1, dd_Smed_v6_9579_0_1, [RH, Score=136, Expect=4e-34]} {RNA1509_37543} {RNA1310_8844} {RNA815_11962}
38. MligTC455_30549 112 2.32 Mlig455_018692

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_018692 {REF} {Length: 1400} {NoTransDecoderORF} {RNA1509_40709} {RNA1310_18972} {RNA815_34163}
39. MligTC455_18898 16 0.33 Mlig455_065083

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_065083 {REF} {Length: 906} {NoTransDecoderORF} {RNA1310_56788}
40. MligTC455_10332 16 0.33 Mlig455_040016

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_040016 {REF} {Length: 402} {TRANSSPLICED}
41. MligTC455_21178 29 0.59 Mlig455_001203, Mlig455_066754, Mlig455_069710

Neo: -

Age: Down-Up-Down

 CCKAR, NPFFR1 0.954 - - - - 0.954 -

Mlig455_001203 {REF} {Length: 4789} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=109.9]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=60.5, Expect=3e-09]; ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=58.5, Expect=9e-09]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=59.3, Expect=3e-09]; ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=58.2, Expect=4e-09]; ENSMUSG00000029193, Cckar, cholecystokinin A receptor, [Score=56.6, Expect=3e-08]; ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=56.6, Expect=2e-08]} {Dmel: FBgn0038542, TyrR, Tyramine receptor, [Score=65.5, Expect=4e-11]} {Celegans: WBGene00004778, ser-3, SERotonin/octopamine receptor family, [Score=58.5, Expect=5e-09]} {Smed: dd_Smed_v6_43180_0_1, dd_Smed_v6_43180_0_1, [Score=72.4, Expect=4e-14]} {RNA1310_113134}

Mlig455_066754 {REF} {Length: 3197} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=84.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=52.8, Expect=6e-07]} {Mouse: ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=54.7, Expect=1e-07]} {Dmel: FBgn0038542, TyrR, Tyramine receptor, [Score=53.5, Expect=2e-07]} {Celegans: WBGene00006428, tkr-3, TachyKinin Receptor family, [Score=50.1, Expect=1e-06]} {Smed: dd_Smed_v6_16725_0_1, dd_Smed_v6_16725_0_1, [Score=52.8, Expect=2e-07]} {RNA1310_131269}

Mlig455_069710 {REF} {Length: 1208} {NoTransDecoderORF} {RNA1310_131269}
42. MligTC455_50383 98 2.03 Mlig455_047908, Mlig455_047996

Neo: -

Age: -

 MCM10 0.952 - - - - 0.952 -

Mlig455_047908 {REF} {Length: 3466} {TRANSSPLICED} {Pfam: Mcm10 replication factor [PF09332.13, score=165.9]; Primase zinc finger [PF09329.13, score=39.7]} {Human: ENSG00000065328, MCM10, minichromosome maintenance 10 replication initiation factor, [RH, Score=125, Expect=8e-29]} {Mouse: ENSMUSG00000026669, Mcm10, minichromosome maintenance 10 replication initiation factor, [RH, Score=116, Expect=3e-26]} {Dmel: FBgn0032929, Mcm10, Minichromosome maintenance 10, [RH, Score=103, Expect=2e-22]} {Celegans: WBGene00012935, mcm-10, Yeast MCM (Licensing factor) related, [RH, Score=75.9, Expect=7e-14]} {Smed: dd_Smed_v6_16334_0_2, dd_Smed_v6_16334_0_2, [RH, Score=97.8, Expect=3e-22]} {RNA1509_24694} {RNA1310_4470.1} {RNA815_12049}

Mlig455_047996 {REF} {Length: 3399} {TRANSSPLICED} {Pfam: Mcm10 replication factor [PF09332.13, score=165.9]; Primase zinc finger [PF09329.13, score=39.7]} {Human: ENSG00000065328, MCM10, minichromosome maintenance 10 replication initiation factor, [RH, Score=125, Expect=8e-29]} {Mouse: ENSMUSG00000026669, Mcm10, minichromosome maintenance 10 replication initiation factor, [RH, Score=116, Expect=3e-26]} {Dmel: FBgn0032929, Mcm10, Minichromosome maintenance 10, [RH, Score=103, Expect=2e-22]} {Celegans: WBGene00012935, mcm-10, Yeast MCM (Licensing factor) related, [RH, Score=75.9, Expect=7e-14]} {Smed: dd_Smed_v6_16334_0_2, dd_Smed_v6_16334_0_2, [RH, Score=97.8, Expect=3e-22]} {RNA1509_24694} {RNA1310_4470.1} {RNA815_12049}
43. MligTC455_13928 20 0.42 Mlig455_021798

Neo: -

Age: -

 ASCL5 0.951 - - 0.951 - - - Mlig455_021798 {REF} {Length: 1778} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=57.9]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [RH, Score=68.2, Expect=3e-14]; ENSG00000187855, ASCL4, achaete-scute family bHLH transcription factor 4, [RH, Score=67.0, Expect=5e-14]; ENSG00000176009, ASCL3, achaete-scute family bHLH transcription factor 3, [RH, Score=65.1, Expect=3e-13]} {Mouse: ENSMUSG00000035951, Ascl3, achaete-scute family bHLH transcription factor 3, [RH, Score=67.8, Expect=2e-14]; ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [RH, Score=64.7, Expect=3e-13]} {Dmel: FBgn0004170, sc, scute, [RH, Score=67.8, Expect=9e-14]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [Score=57.8, Expect=2e-10]} {Smed: dd_Smed_v6_1854_0_1, dd_Smed_v6_1854_0_1, [Score=72.4, Expect=5e-17]} {RNA1509_26675} {RNA1310_40247} {RNA815_47719.2}
44. MligTC455_14131 54 1.12 Mlig455_039105

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.013

 0.95 - - - - 0.950 - Mlig455_039105 {REF} {Length: 3876} {RNA1310_38427} {RNA815_24357}
45. MligTC455_19543 6 0.12 Mlig455_058798

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_058798 {REF} {Length: 1327} {NoTransDecoderORF} {RNA1509_37415} {RNA1310_49986.1} {RNA815_34381}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA