Data search
Results for MligTC455_19088
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19088 | 635 | 13.23 | Mlig455_002010 | Neo: - Age: - |
Mlig455_002010 {REF} {Length: 1783} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=50.9]; Tight junction protein, Claudin-like [PF06653.13, score=29.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=24.1]; Protein of unknown function (DUF2723) [PF11028.10, score=20.5]} {Dmel: FBgn0013720, pck, pickel, [RH, Score=111, Expect=5e-29]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [RH, Score=172, Expect=1e-52]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192} |
Cumulative graph for MligTC455_19088
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.081 | 3.865 | 0.03110 | 0.44917 | |
| RegionR2 | 1.534 | 3.865 | 0.03457 | 0.21313 | |
| RegionR3 | 0.025 | 3.865 | 0.83866 | 1.00000 | |
| RegionR4 | 0.442 | 3.865 | 0.62214 | 0.93183 | |
| RegionR5 | 0.495 | 3.865 | 0.56013 | 0.91987 | |
| RegionR6 | 0.779 | 3.865 | 0.34409 | 0.93095 | |
| RegionR7 | 1.979 | 3.865 | 0.00232 | 0.06344 | |
| RegionR8 | 1.827 | 3.865 | 0.01822 | 0.26237 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.923 | 3.865 | 0.38043 | 1.00000 | |
| RegenerationR2 | 0.102 | 3.865 | 0.80303 | 0.99080 | |
| RegenerationR3 | 0.652 | 3.865 | 0.21048 | 0.64681 | |
| RegenerationR4 | -0.234 | 3.865 | 0.65406 | 0.93513 | |
| RegenerationR5 | 0.076 | 3.865 | 0.86949 | 1.00000 | |
| RegenerationR6 | 0.376 | 3.865 | 0.44423 | 0.76689 | |
| RegenerationBL | 0.532 | 3.865 | 0.24713 | 0.60201 | |
| RegenerationTP | 0.671 | 3.865 | 0.16092 | 0.58963 |
Genes with expression patterns similar to MligTC455_19088
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19088 | 635 | 13.23 | Mlig455_002010 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002010 {REF} {Length: 1783} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=50.9]; Tight junction protein, Claudin-like [PF06653.13, score=29.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=24.1]; Protein of unknown function (DUF2723) [PF11028.10, score=20.5]} {Dmel: FBgn0013720, pck, pickel, [RH, Score=111, Expect=5e-29]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [RH, Score=172, Expect=1e-52]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192} | |
| 2. | MligTC455_19089 | 645 | 13.43 | Mlig455_002210 | Neo: - Age: - Region-enriched R7: 2.068/0.03789 |
MEGF6 | 5.971 | 1.000 | 1.000 | 0.996 | 0.999 | 0.981 | 0.995 | Mlig455_002210 {REF} {Length: 7790} {Pfam: Coagulation Factor Xa inhibitory site [PF14670.8, score=117.5]; Laminin EGF domain [PF00053.26, score=111.7]; Calcium-binding EGF domain [PF07645.17, score=84.0]; Complement Clr-like EGF-like [PF12662.9, score=74.8]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=41.3]; Human growth factor-like EGF [PF12661.9, score=21.3]; Tight junction protein, Claudin-like [PF06653.13, score=20.1]; EGF domain [PF12947.9, score=19.0]} {Human: ENSG00000162591, MEGF6, multiple EGF like domains 6, [RH, Score=974, Expect=0.0]} {Mouse: ENSMUSG00000057751, Megf6, multiple EGF-like-domains 6, [RH, Score=1023, Expect=0.0]} {Dmel: FBgn0027594, drpr, draper, [RH, Score=446, Expect=1e-133]} {Celegans: WBGene00013416, Y64G10A.7, [RH, Score=1100, Expect=0.0]} {Smed: dd_Smed_v6_5630_0_1, dd_Smed_v6_5630_0_1, [Score=758, Expect=0.0]} {RNA1509_42688} {RNA1310_2807} {RNA815_1132} |
| 3. | MligTC455_19090 | 545 | 11.36 | Mlig455_002101 | Neo: - Age: Down-Down-Up |
3.514 | 0.995 | 0.992 | - | 0.744 | - | 0.783 | Mlig455_002101 {REF} {Length: 2098} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=43.2]; Tight junction protein, Claudin-like [PF06653.13, score=21.1]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=20.4]; Protein of unknown function (DUF2723) [PF11028.10, score=20.4]} {Dmel: FBgn0013720, pck, pickel, [Score=102, Expect=7e-26]} {Smed: dd_Smed_v6_2731_0_1, dd_Smed_v6_2731_0_1, [Score=160, Expect=3e-48]} {RNA1509_17191} {RNA1310_15814} {RNA815_6192} | |
| 4. | MligTC455_51553 | 420 | 8.74 | Mlig455_015044 | Neo: - Age: - |
DDAH1 | 2.431 | - | - | 0.714 | 0.963 | - | 0.754 | Mlig455_015044 {REF} {Length: 3170} {Pfam: N,N dimethylarginine dimethylhydrolase, eukaryotic [PF19420.1, score=30.0]; Arginine deiminase [PF02274.19, score=20.6]} {Human: ENSG00000153904, DDAH1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=145, Expect=2e-41]} {Mouse: ENSMUSG00000028194, Ddah1, dimethylarginine dimethylaminohydrolase 1, [RH, Score=137, Expect=2e-38]} {Dmel: FBgn0030467, CG1764, [Score=169, Expect=3e-51]} {Smed: dd_Smed_v6_1460_0_1, dd_Smed_v6_1460_0_1, [RH, Score=299, Expect=3e-102]} {RNA1509_20449} {RNA1310_30475} {RNA815_13738} |
| 5. | MligTC455_43295 | 255 | 5.3 | Mlig455_060354 | Neo: - |
ACE | 1.775 | - | - | - | 0.971 | - | 0.804 | Mlig455_060354 {REF} {Length: 2875} {Pfam: Angiotensin-converting enzyme [PF01401.20, score=464.5]} {Human: ENSG00000159640, ACE, angiotensin I converting enzyme, [Score=303, Expect=4e-93]; ENSG00000264813, AC113554.1, novel transcript, [Score=302, Expect=1e-92]} {Mouse: ENSMUSG00000020681, Ace, angiotensin I converting enzyme (peptidyl-dipeptidase A) 1, [Score=298, Expect=2e-91]; ENSMUSG00000015405, Ace2, angiotensin I converting enzyme (peptidyl-dipeptidase A) 2, [Score=284, Expect=2e-85]} {Dmel: FBgn0016122, Acer, Angiotensin-converting enzyme-related, [Score=305, Expect=4e-95]} {Celegans: WBGene00000039, acn-1, Inactive angiotensin-converting enzyme-related protein, [Score=164, Expect=1e-42]} {Smed: dd_Smed_v6_6160_0_1, dd_Smed_v6_6160_0_1, [Score=356, Expect=5e-115]} {RNA1509_56001} {RNA1310_14815.1, RNA1509_56001} {RNA1509_56001, RNA815_2611.1} |
| 6. | MligTC455_23774 | 749 | 15.6 | Mlig455_051848, Mlig455_051861 | Neo: - Age: - Region-enriched R7: 1.943/0.04725 |
1.75 | - | - | - | 0.955 | 0.795 | - | Mlig455_051848 {REF} {Length: 1676} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} Mlig455_051861 {REF} {Length: 1572} {RNA1509_43013} {RNA1310_12180.2} {RNA815_6222} |
|
| 7. | MligTC455_20339 | 248 | 5.16 | Mlig455_049193 | Neo: - Age: logFC(26M/2M)=0.976 Region-enriched R8: 3.824/0.00004 |
1.726 | - | - | - | 0.955 | - | 0.771 | Mlig455_049193 {REF} {Length: 1276} {TRANSSPLICED} {RNA1509_32364} {RNA1310_8246} {RNA815_10070.1} | |
| 8. | MligTC455_51650 | 92 | 1.93 | Mlig455_036750 | Neo: - Age: - Region-enriched R2: 3.192/0.03650 |
ARL3 | 1.692 | - | - | - | 0.969 | - | 0.723 | Mlig455_036750 {REF} {Length: 2942} {Pfam: ADP-ribosylation factor family [PF00025.23, score=98.6]; G-protein alpha subunit [PF00503.22, score=36.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.5]; 50S ribosome-binding GTPase [PF01926.25, score=20.6]; Ras family [PF00071.24, score=20.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=81.3, Expect=2e-18]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=81.3, Expect=3e-18]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=78.6, Expect=2e-17]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000034936, Arl4d, ADP-ribosylation factor-like 4D, [Score=84.7, Expect=8e-20]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=82.4, Expect=5e-19]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=80.9, Expect=2e-18]} {Dmel: FBgn0038916, dnd, dead end, [Score=82.8, Expect=2e-19]} {Celegans: WBGene00000188, arl-3, ADP-ribosylation factor-like protein 3, [Score=86.3, Expect=1e-20]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=102, Expect=3e-27]} {RNA1310_52038} {RNA815_22575.1} |
| 9. | MligTC455_29288 | 473 | 9.85 | Mlig455_036826 | Neo: - Age: logFC(26M/2M)=-0.226 Region-enriched R7: 2.343/0.02199 |
RHBDL2 | 1.682 | - | - | 0.729 | 0.953 | - | - | Mlig455_036826 {REF} {Length: 2218} {Pfam: Rhomboid family [PF01694.24, score=62.6]; EF-hand domain pair [PF13499.8, score=21.7]; EF hand [PF00036.34, score=19.2]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=110, Expect=5e-27]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=119, Expect=2e-30]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=110, Expect=3e-26]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=106, Expect=2e-25]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=184, Expect=7e-54]} {RNA1509_28194, RNA1509_59221} {RNA1310_13375, RNA1509_59221} {RNA1509_59221, RNA815_2003.1} |
| 10. | MligTC455_52882 | 325 | 6.78 | Mlig455_018278 | Neo: - Age: - |
1.669 | - | - | - | 0.962 | 0.707 | - | Mlig455_018278 {REF} {Length: 3774} {TRANSSPLICED} {RNA1509_55279} {RNA1310_9272} {RNA815_18292} | |
| 11. | MligTC455_46068 | 746 | 15.54 | Mlig455_036638 | Neo: - Age: Down-Up-Up |
DNAJB9 | 0.964 | - | - | - | 0.964 | - | - | Mlig455_036638 {REF} {Length: 1862} {Pfam: DnaJ domain [PF00226.33, score=91.5]} {Human: ENSG00000128590, DNAJB9, DnaJ heat shock protein family (Hsp40) member B9, [RH, Score=108, Expect=8e-29]} {Mouse: ENSMUSG00000014905, Dnajb9, DnaJ heat shock protein family (Hsp40) member B9, [RH, Score=110, Expect=7e-30]} {Dmel: FBgn0031322, CG5001, [Score=94.4, Expect=8e-23]} {Celegans: WBGene00001034, dnj-16, DNaJ domain (Prokaryotic heat shock protein), [Score=87.0, Expect=4e-20]} {Smed: dd_Smed_v6_1779_0_1, dd_Smed_v6_1779_0_1, [RH, Score=136, Expect=2e-40]} {RNA1509_8261} {RNA1310_16537.1, RNA1509_8261} {RNA1509_8261, RNA815_12797} |
| 12. | MligTC455_21605 | 5651 | 117.73 | Mlig455_003293 | Neo: - Age: - |
0.963 | - | - | - | 0.963 | - | - | Mlig455_003293 {REF} {Length: 719} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_5652} {RNA1310_14123.1} {RNA815_13001} | |
| 13. | MligTC455_35156 | 435 | 9.07 | Mlig455_055923 | Neo: - Age: - |
MARCH1 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_055923 {REF} {Length: 2859} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=46.9]} {Human: ENSG00000145416, MARCH1, membrane associated ring-CH-type finger 1, [RH, Score=226, Expect=5e-69]} {Mouse: ENSMUSG00000036469, March1, membrane-associated ring finger (C3HC4) 1, [RH, Score=226, Expect=7e-69]} {Dmel: FBgn0035983, CG4080, [Score=206, Expect=7e-61]} {Celegans: WBGene00013273, marc-5, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [Score=68.9, Expect=1e-12]} {Smed: dd_Smed_v6_4997_0_2, dd_Smed_v6_4997_0_2, [RH, Score=252, Expect=6e-81]} {RNA1509_28382, RNA1509_33393} {RNA1310_21336.1, RNA1509_33393} {RNA1509_33393, RNA815_12925} |
| 14. | MligTC455_16552 | 621 | 12.94 | Mlig455_031188 | Neo: - Age: Down-Up-Up |
USH1G | 0.956 | - | - | - | 0.956 | - | - | Mlig455_031188 {REF} {Length: 2185} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=82.6]; Ankyrin repeats (many copies) [PF13637.8, score=74.2]; Ankyrin repeats (many copies) [PF13857.8, score=45.5]; Ankyrin repeat [PF13606.8, score=44.2]; Ankyrin repeat [PF00023.32, score=43.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=25.8]} {Human: ENSG00000182040, USH1G, USH1 protein network component sans, [RH, Score=223, Expect=6e-67]} {Mouse: ENSMUSG00000045288, Ush1g, USH1 protein network component sans, [RH, Score=224, Expect=2e-67]} {Dmel: FBgn0033785, Sans, Scaffold protein containing ankyrin repeats and SAM domain, [RH, Score=150, Expect=7e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=68.2, Expect=8e-12]} {Smed: dd_Smed_v6_68524_0_1, dd_Smed_v6_68524_0_1, [RH, Score=117, Expect=9e-31]} {RNA1509_15656} {RNA1310_14657, RNA1509_15656} {RNA1509_15656, RNA815_12521} |
| 15. | MligTC455_46631 | 123 | 2.57 | Mlig455_047437 | Neo: - Age: Down-Up-Down |
GFI1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_047437 {REF} {Length: 2141} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=92.6]; Zinc-finger double domain [PF13465.8, score=91.3]; C2H2-type zinc finger [PF13894.8, score=70.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=40.4]; C2H2-type zinc finger [PF13912.8, score=32.5]; BED zinc finger [PF02892.17, score=21.4]; Zinc-finger of C2H2 type [PF12874.9, score=19.3]} {Human: ENSG00000162676, GFI1, growth factor independent 1 transcriptional repressor, [RH, Score=297, Expect=7e-97]; ENSG00000165702, GFI1B, growth factor independent 1B transcriptional repressor, [RH, Score=294, Expect=7e-97]} {Mouse: ENSMUSG00000029275, Gfi1, growth factor independent 1 transcription repressor, [RH, Score=299, Expect=8e-97]; ENSMUSG00000026815, Gfi1b, growth factor independent 1B, [RH, Score=294, Expect=4e-97]} {Dmel: FBgn0051632, sens-2, senseless-2, [RH, Score=298, Expect=6e-94]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [RH, Score=236, Expect=8e-75]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [RH, Score=273, Expect=5e-89]} {RNA1509_50869} {RNA1310_63181} {RNA815_39346} |
| 16. | MligTC455_25792 | 1420 | 29.58 | Mlig455_016342, Mlig455_020876, Mlig455_036482, Mlig455_060659, Mlig455_068395 | Neo: - Age: - Region-enriched R7: 1.712/0.01745 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_016342 {REF} {Length: 850} {RNA1509_22707} {RNA1310_33596.1} {RNA815_24119.1} Mlig455_020876 {REF} {Length: 1066} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_036482 {REF} {Length: 786} {RNA1509_22707} {RNA1310_15800} {RNA815_24119.1} Mlig455_060659 {REF} {Length: 1236} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1} Mlig455_068395 {REF} {Length: 354} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_90313} {RNA815_24119.1} |
Berezikov Lab - 2020-2021 © ERIBA