Data search


search
Exact
Search

Results for MligTC455_19133

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19133 139 2.90 Mlig455_050516

Neo: -

Age: logFC(26M/2M)=0.257

ATE1 Mlig455_050516 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: Arginine-tRNA-protein transferase, C terminus [PF04377.17, score=163.2]; Arginine-tRNA-protein transferase, N terminus [PF04376.15, score=81.6]} {Human: ENSG00000107669, ATE1, arginyltransferase 1, [RH, Score=293, Expect=6e-93]} {Mouse: ENSMUSG00000030850, Ate1, arginyltransferase 1, [RH, Score=279, Expect=1e-87]} {Dmel: FBgn0025720, Ate1, [RH, Score=270, Expect=6e-85]} {Celegans: WBGene00010615, ate-1, Arginyl-tRNA--protein transferase 1, [RH, Score=231, Expect=3e-70]} {Smed: dd_Smed_v6_11679_0_1, dd_Smed_v6_11679_0_1, [RH, Score=254, Expect=6e-79]} {RNA1509_14961} {RNA1310_16832, RNA1509_14961} {RNA1509_14961, RNA815_7440.1}

Cumulative graph for MligTC455_19133

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.821 2.372 0.24805 0.89443
RegionR2 1.219 2.372 0.43638 0.82615
RegionR3 1.784 2.372 0.17097 0.69683
RegionR4 0.932 2.372 0.49888 0.82571
RegionR5 1.922 2.372 0.10122 0.30772
RegionR6 -0.001 2.372 0.86735 1.00000
RegionR7 -0.65 2.372 0.97191 1.00000
RegionR8 0.615 2.372 0.70383 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.013 2.372 0.99995 1.00000
RegenerationR2 0.205 2.372 0.86543 1.00000
RegenerationR3 -0.7 2.372 0.58015 0.89892
RegenerationR4 -0.226 2.372 0.85303 1.00000
RegenerationR5 0.008 2.372 0.98476 1.00000
RegenerationR6 0.248 2.372 0.86786 1.00000
RegenerationBL -4.06 2.372 0.14735 0.45814
RegenerationTP 2.24 2.372 0.13132 0.54489


Genes with expression patterns similar to MligTC455_19133

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19133 139 2.9 Mlig455_050516

Neo: -

Age: logFC(26M/2M)=0.257

ATE1 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_050516 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: Arginine-tRNA-protein transferase, C terminus [PF04377.17, score=163.2]; Arginine-tRNA-protein transferase, N terminus [PF04376.15, score=81.6]} {Human: ENSG00000107669, ATE1, arginyltransferase 1, [RH, Score=293, Expect=6e-93]} {Mouse: ENSMUSG00000030850, Ate1, arginyltransferase 1, [RH, Score=279, Expect=1e-87]} {Dmel: FBgn0025720, Ate1, [RH, Score=270, Expect=6e-85]} {Celegans: WBGene00010615, ate-1, Arginyl-tRNA--protein transferase 1, [RH, Score=231, Expect=3e-70]} {Smed: dd_Smed_v6_11679_0_1, dd_Smed_v6_11679_0_1, [RH, Score=254, Expect=6e-79]} {RNA1509_14961} {RNA1310_16832, RNA1509_14961} {RNA1509_14961, RNA815_7440.1}
2. MligTC455_34024 339 7.06 Mlig455_055755

Neo: -

Age: -

Region-enriched R5: 1.899/0.00004

2.641 0.800 - - - 0.952 0.889 Mlig455_055755 {REF} {Length: 2298} {TRANSSPLICED} {RNA1509_38778} {RNA1310_16573, RNA1509_38778} {RNA1509_38778, RNA815_17823}
3. MligTC455_50836 545 11.35 Mlig455_044654, Mlig455_044714

Neo: -

Age: -

WDR7 1.834 0.868 - - - - 0.966

Mlig455_044654 {REF} {Length: 4892} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.1]} {Human: ENSG00000091157, WDR7, WD repeat domain 7, [RH, Score=351, Expect=6e-100]} {Mouse: ENSMUSG00000040560, Wdr7, WD repeat domain 7, [RH, Score=348, Expect=6e-99]} {Dmel: FBgn0023510, Rbcn-3B, Rabconnectin-3B, [RH, Score=362, Expect=8e-104]} {Celegans: WBGene00004314, rbc-2, RaBConnectin related, [RH, Score=273, Expect=6e-75]} {Smed: dd_Smed_v6_10850_0_1, dd_Smed_v6_10850_0_1, [RH, Score=197, Expect=4e-51]} {RNA1509_28304, RNA1509_49425} {RNA1310_3118.1, RNA1509_28304, RNA1509_49425} {RNA1509_28304, RNA1509_49425, RNA815_10098}

Mlig455_044714 {REF} {Length: 4865} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=29.5]} {Human: ENSG00000091157, WDR7, WD repeat domain 7, [RH, Score=357, Expect=7e-102]} {Mouse: ENSMUSG00000040560, Wdr7, WD repeat domain 7, [Score=353, Expect=2e-100]} {Dmel: FBgn0023510, Rbcn-3B, Rabconnectin-3B, [RH, Score=362, Expect=1e-103]} {Celegans: WBGene00004314, rbc-2, RaBConnectin related, [RH, Score=274, Expect=4e-75]} {Smed: dd_Smed_v6_10850_0_1, dd_Smed_v6_10850_0_1, [RH, Score=194, Expect=7e-50]} {RNA1509_49425} {RNA1310_3118.1} {RNA815_10098}
4. MligTC455_49111 106 2.22 Mlig455_070670

Neo: -

Age: -

1.788 0.838 - - - - 0.950 Mlig455_070670 {REF} {Length: 5881} {Pfam: Rho termination factor, N-terminal domain [PF07498.14, score=20.5]} {RNA1310_43308.1} {RNA815_46164}
5. MligTC455_37863 213 4.44 Mlig455_015363

Neo: -

Age: Up-Down-Down

NBAS 1.757 0.807 - - - - 0.950 Mlig455_015363 {REF} {Length: 8517} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=51.4]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=384, Expect=1e-106]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=413, Expect=6e-116]} {Celegans: WBGene00008990, smgl-1, [RH, Score=55.5, Expect=5e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=206, Expect=1e-52]} {RNA1509_11685, RNA1509_55641} {RNA1310_353.1, RNA1509_11685, RNA1509_55641} {RNA1509_11685, RNA1509_55641, RNA815_138}
6. MligTC455_17074 854 17.79 Mlig455_039446, Mlig455_039491

Neo: -

Age: -

Region-enriched R5: 1.202/0.00436

RTCB 1.739 - - 0.775 - - 0.964

Mlig455_039446 {REF} {Length: 3848} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187, RNA1509_10458} {RNA1509_10458, RNA815_12172}

Mlig455_039491 {REF} {Length: 3869} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187} {RNA815_12172}
7. MligTC455_37399 85 1.77 Mlig455_050897

Neo: Int S/G2/M

Age: -

TREX1 1.717 - - - - 0.757 0.960 Mlig455_050897 {REF} {Length: 3096} {TRANSSPLICED} {Pfam: Exonuclease [PF00929.26, score=26.7]} {Human: ENSG00000213689, TREX1, three prime repair exonuclease 1, [RH, Score=104, Expect=7e-26]} {Mouse: ENSMUSG00000031372, Trex2, three prime repair exonuclease 2, [Score=94.0, Expect=9e-23]; ENSMUSG00000049734, Trex1, three prime repair exonuclease 1, [Score=93.2, Expect=6e-22]} {Dmel: FBgn0031484, CG3165, [Score=70.1, Expect=1e-13]} {RNA1509_32322} {RNA1310_41251, RNA1509_32322} {RNA1509_32322, RNA815_48691}
8. MligTC455_17714 813 16.95 Mlig455_065255

Neo: -

Age: Down-Up-Up

1.698 - - - - 0.976 0.722 Mlig455_065255 {REF} {Length: 535} {TRANSSPLICED} {RNA1509_27615, RNA1509_46296} {RNA1310_67870, RNA1509_27615, RNA1509_46296} {RNA1509_27615, RNA1509_46296, RNA815_34291}
9. MligTC455_37459 241 5.03 Mlig455_016238

Neo: -

Age: -

MFSD3 1.659 0.704 - - - - 0.955 Mlig455_016238 {REF} {Length: 2553} {Pfam: Major Facilitator Superfamily [PF07690.18, score=48.5]; Acetyl-coenzyme A transporter 1 [PF13000.9, score=36.9]} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [RH, Score=188, Expect=1e-54]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0036662, CG9706, [Score=53.1, Expect=3e-07]} {Celegans: WBGene00012033, T26C5.3, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [RH, Score=299, Expect=7e-98]} {RNA1509_41389} {RNA1310_7558, RNA1509_41389} {RNA1509_41389, RNA815_19511}
10. MligTC455_42531 336 7 Mlig455_030594

Neo: Int S/G2/M

Age: Down-Up-Up

ABT1 0.978 - - - - - 0.978 Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694}
11. MligTC455_30734 43 0.9 Mlig455_039125, Mlig455_039203

Neo: -

Age: -

Regeneration-enriched R3: 6.432
Regeneration-enriched R4: 5.799
Regeneration-enriched R5: 5.437

AGPAT5 0.972 - - - - - 0.972

Mlig455_039125 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: Acyltransferase [PF01553.23, score=69.6]; Acyltransferase C-terminus [PF16076.7, score=59.2]} {Human: ENSG00000284980, AGPAT5, 1-acylglycerol-3-phosphate O-acyltransferase 5, [RH, Score=255, Expect=7e-82]; ENSG00000155189, AGPAT5, 1-acylglycerol-3-phosphate O-acyltransferase 5, [RH, Score=255, Expect=7e-82]} {Mouse: ENSMUSG00000031467, Agpat5, 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon), [RH, Score=259, Expect=2e-83]} {Dmel: FBgn0036622, CG4753, [Score=137, Expect=7e-37]} {Celegans: WBGene00017888, acl-11, ACyLtransferase-like, [RH, Score=183, Expect=2e-54]} {Smed: dd_Smed_v6_4077_0_1, dd_Smed_v6_4077_0_1, [RH, Score=303, Expect=4e-101]} {RNA1509_26215} {RNA1310_18400.1} {RNA815_6692}

Mlig455_039203 {REF} {Length: 757} {Pfam: Acyltransferase [PF01553.23, score=66.1]; Acyltransferase C-terminus [PF16076.7, score=59.8]} {Human: ENSG00000284980, AGPAT5, 1-acylglycerol-3-phosphate O-acyltransferase 5, [Score=213, Expect=4e-66]; ENSG00000155189, AGPAT5, 1-acylglycerol-3-phosphate O-acyltransferase 5, [Score=213, Expect=4e-66]} {Mouse: ENSMUSG00000031467, Agpat5, 1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon), [Score=215, Expect=3e-67]} {Dmel: FBgn0036622, CG4753, [Score=110, Expect=3e-27]} {Celegans: WBGene00017888, acl-11, ACyLtransferase-like, [Score=154, Expect=7e-44]} {Smed: dd_Smed_v6_4077_0_1, dd_Smed_v6_4077_0_1, [Score=256, Expect=1e-83]} {RNA1509_26215} {RNA1310_18400.1} {RNA815_6692}
12. MligTC455_48485 288 6 Mlig455_012655

Neo: Int S/G2/M

Age: -

PRPSAP2 0.968 - - - - - 0.968 Mlig455_012655 {REF} {Length: 2503} {TRANSSPLICED} {Pfam: Phosphoribosyl synthetase-associated domain [PF14572.8, score=267.6]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=122.0]; Phosphoribosyl transferase domain [PF00156.29, score=29.8]} {Human: ENSG00000141127, PRPSAP2, phosphoribosyl pyrophosphate synthetase associated protein 2, [Score=379, Expect=8e-130]} {Mouse: ENSMUSG00000020528, Prpsap2, phosphoribosyl pyrophosphate synthetase-associated protein 2, [Score=376, Expect=5e-129]; ENSMUSG00000015869, Prpsap1, phosphoribosyl pyrophosphate synthetase-associated protein 1, [Score=359, Expect=3e-122]} {Dmel: FBgn0039790, CG2246, [RH, Score=429, Expect=2e-149]} {Celegans: WBGene00012258, W04G3.5, [RH, Score=403, Expect=3e-140]} {Smed: dd_Smed_v6_4658_0_1, dd_Smed_v6_4658_0_1, [RH, Score=462, Expect=3e-163]} {RNA1509_48717} {RNA1310_19663.2, RNA1509_48717} {RNA1509_48717, RNA815_17008}
13. MligTC455_42436 440 9.17 Mlig455_018859

Neo: -

Age: -

VPS51 0.965 - - - - - 0.965 Mlig455_018859 {REF} {Length: 3001} {TRANSSPLICED} {Pfam: Vps51/Vps67 [PF08700.13, score=91.6]; Exocyst complex component Sec5 [PF15469.8, score=79.8]; Dor1-like family [PF04124.14, score=46.6]; COG (conserved oligomeric Golgi) complex component, COG2 [PF06148.13, score=41.3]; Golgi transport complex subunit 5 [PF10392.11, score=34.8]; Vacuolar-sorting protein 54, of GARP complex [PF10475.11, score=28.1]; Vps53-like, N-terminal [PF04100.14, score=21.6]} {Human: ENSG00000149823, VPS51, VPS51, GARP complex subunit, [RH, Score=555, Expect=0.0]} {Mouse: ENSMUSG00000024797, Vps51, VPS51 GARP complex subunit, [RH, Score=544, Expect=0.0]; ENSMUSG00000024799, Tm7sf2, transmembrane 7 superfamily member 2, [RH, Score=544, Expect=0.0]} {Dmel: FBgn0034380, Vps51, Vacuolar protein sorting 51, [RH, Score=487, Expect=7e-162]} {Celegans: WBGene00015176, vps-51, Vacuolar protein sorting-associated protein 51 homolog, [RH, Score=253, Expect=1e-73]} {Smed: dd_Smed_v6_8916_0_2, dd_Smed_v6_8916_0_2, [RH, Score=476, Expect=6e-157]} {RNA1509_9394} {RNA1310_5753, RNA1509_9394} {RNA1509_9394, RNA815_5831}
14. MligTC455_25201 771 16.07 Mlig455_067420, Mlig455_069560

Neo: -

Age: -

SETD3 0.964 - - - - - 0.964

Mlig455_067420 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.0]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=189, Expect=5e-53]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=191, Expect=4e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=1e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=137, Expect=1e-35]} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1310_16143.1, RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782, RNA815_6937}

Mlig455_069560 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.6]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=187, Expect=3e-52]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=192, Expect=2e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=2e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=138, Expect=7e-36]} {RNA1509_49950} {RNA1310_16143.1} {RNA815_6937}
15. MligTC455_48887 342 7.12 Mlig455_068740

Neo: -

Age: -

Region-enriched R5: 2.022/0.00015

0.963 - - - - - 0.963 Mlig455_068740 {REF} {Length: 2197} {TRANSSPLICED} {Pfam: Oxidoreductase family, NAD-binding Rossmann fold [PF01408.24, score=51.4]; Oxidoreductase family, C-terminal alpha/beta domain [PF02894.19, score=29.7]} {RNA1509_15686} {RNA1310_3343.1} {RNA815_561.1}
16. MligTC455_52306 261 5.44 Mlig455_067954

Neo: Irradiation

Age: -

0.963 - - - - - 0.963 Mlig455_067954 {REF} {Length: 3415} {TRANSSPLICED} {RNA1509_40884} {RNA1310_4835} {RNA815_15279}
17. MligTC455_50242 658 13.71 Mlig455_010544, Mlig455_061792, Mlig455_061832

Neo: -

Age: -

Region-enriched R5: 2.437/0.00039

0.961 - - - - - 0.961

Mlig455_010544 {REF} {Length: 2417} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388, RNA1509_46524} {RNA1310_11073, RNA1509_46524} {RNA1509_46524, RNA815_6049}

Mlig455_061792 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073} {RNA815_6049}

Mlig455_061832 {REF} {Length: 1890} {TRANSSPLICED} {Pfam: Inosine-uridine preferring nucleoside hydrolase [PF01156.21, score=200.6]} {Dmel: FBgn0030510, CG12177, [Score=107, Expect=4e-26]} {Celegans: WBGene00012834, Y43F8C.13, [Score=139, Expect=4e-38]} {Smed: dd_Smed_v6_2952_0_1, dd_Smed_v6_2952_0_1, [RH, Score=147, Expect=2e-41]} {RNA1509_22388} {RNA1310_11073, RNA1509_22388} {RNA1509_22388, RNA815_6049}
18. MligTC455_46411 1598 33.3 Mlig455_031090, Mlig455_031125

Neo: Int S/G2/M

Age: -

RFC1 0.959 - - - - - 0.959

Mlig455_031090 {REF} {Length: 3760} {TRANSSPLICED} {Pfam: Replication factor RFC1 C terminal domain [PF08519.14, score=147.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.3]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=34.2]; twin BRCT domain [PF12738.9, score=20.1]} {Human: ENSG00000035928, RFC1, replication factor C subunit 1, [Score=545, Expect=2e-174]} {Mouse: ENSMUSG00000029191, Rfc1, replication factor C (activator 1) 1, [Score=551, Expect=9e-177]} {Dmel: FBgn0004913, Gnf1, Germ line transcription factor 1, [Score=518, Expect=4e-166]} {Celegans: WBGene00004337, rfc-1, RFC (DNA replication factor) family, [RH, Score=440, Expect=2e-138]} {Smed: dd_Smed_v6_11546_0_1, dd_Smed_v6_11546_0_1, [Score=395, Expect=8e-121]} {RNA1509_32943} {RNA1310_3700} {RNA815_3470}

Mlig455_031125 {REF} {Length: 3479} {TRANSSPLICED} {Pfam: Replication factor RFC1 C terminal domain [PF08519.14, score=148.5]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=47.5]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=34.4]; twin BRCT domain [PF12738.9, score=20.3]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=18.4]} {Human: ENSG00000035928, RFC1, replication factor C subunit 1, [RH, Score=607, Expect=0.0]} {Mouse: ENSMUSG00000029191, Rfc1, replication factor C (activator 1) 1, [RH, Score=620, Expect=0.0]} {Dmel: FBgn0004913, Gnf1, Germ line transcription factor 1, [Score=558, Expect=0.0]} {Celegans: WBGene00004337, rfc-1, RFC (DNA replication factor) family, [RH, Score=437, Expect=4e-138]} {Smed: dd_Smed_v6_11546_0_1, dd_Smed_v6_11546_0_1, [RH, Score=454, Expect=1e-143]} {RNA1509_22129} {RNA1310_3700} {RNA815_3470}
19. MligTC455_46660 319 6.65 Mlig455_029098, Mlig455_029118

Neo: -

Age: -

TPCN1 0.958 - - - - 0.958 -

Mlig455_029098 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=111.5]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [Score=167, Expect=2e-42]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [Score=176, Expect=5e-46]} {Dmel: FBgn0085434, NaCP60E, Na channel protein 60E, [Score=65.5, Expect=1e-10]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [Score=169, Expect=6e-44]} {RNA1509_51248} {RNA1310_6971.3} {RNA815_6160}

Mlig455_029118 {REF} {Length: 3351} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=165.9]} {Human: ENSG00000186815, TPCN1, two pore segment channel 1, [RH, Score=197, Expect=2e-52]} {Mouse: ENSMUSG00000032741, Tpcn1, two pore channel 1, [RH, Score=207, Expect=5e-56]} {Dmel: FBgn0001991, Ca-alpha1D, Ca[2+]-channel protein alpha[[1]] subunit D, [Score=73.6, Expect=6e-13]} {Celegans: WBGene00006742, unc-2, High voltage activated calcium channel alpha-1 subunit, [Score=67.4, Expect=3e-11]} {Smed: dd_Smed_v6_8333_0_1, dd_Smed_v6_8333_0_1, [RH, Score=229, Expect=2e-64]} {RNA1509_51248} {RNA1310_6971.1, RNA1509_51248} {RNA1509_51248, RNA815_6160}
20. MligTC455_51946 322 6.71 Mlig455_039407

Neo: Int S/G2/M

Age: Down-Up-Up

NUP54 0.957 - - - - - 0.957 Mlig455_039407 {REF} {Length: 2670} {TRANSSPLICED} {Pfam: Nucleoporin complex subunit 54 [PF13874.8, score=87.6]} {Human: ENSG00000138750, NUP54, nucleoporin 54, [RH, Score=234, Expect=9e-70]} {Mouse: ENSMUSG00000034826, Nup54, nucleoporin 54, [RH, Score=239, Expect=3e-71]} {Dmel: FBgn0033737, Nup54, Nucleoporin 54kD, [RH, Score=255, Expect=1e-76]} {Celegans: WBGene00003787, npp-1, Nuclear Pore complex Protein, [RH, Score=123, Expect=3e-29]} {Smed: dd_Smed_v6_10347_0_1, dd_Smed_v6_10347_0_1, [RH, Score=179, Expect=5e-49]} {RNA1509_26979} {RNA1310_8481.3, RNA1509_26979} {RNA1509_26979, RNA815_23256}
21. MligTC455_17771 78 1.62 Mlig455_001663

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_001663 {REF} {Length: 1828} {NoTransDecoderORF} {RNA1310_81916}
22. MligTC455_23861 1192 24.82 Mlig455_039774

Neo: Int S/G2/M

Age: -

MAPK14 0.953 - - - - - 0.953 Mlig455_039774 {REF} {Length: 3529} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=211.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=102.5]; ABC1 atypical kinase-like domain [PF03109.18, score=21.8]} {Human: ENSG00000112062, MAPK14, mitogen-activated protein kinase 14, [Score=367, Expect=4e-126]; ENSG00000185386, MAPK11, mitogen-activated protein kinase 11, [Score=353, Expect=2e-120]} {Mouse: ENSMUSG00000053436, Mapk14, mitogen-activated protein kinase 14, [Score=368, Expect=1e-126]; ENSMUSG00000053137, Mapk11, mitogen-activated protein kinase 11, [Score=350, Expect=2e-119]} {Dmel: FBgn0024846, p38b, p38b MAP kinase, [Score=347, Expect=2e-118]} {Celegans: WBGene00004055, pmk-1, Mitogen-activated protein kinase pmk-1, [Score=347, Expect=3e-118]} {Smed: dd_Smed_v6_1282_0_1, dd_Smed_v6_1282_0_1, [Score=365, Expect=9e-126]} {RNA1509_11385, RNA1509_25848, RNA1509_40425, RNA1509_41066, RNA1509_43505} {RNA1310_25209, RNA1509_11385, RNA1509_25848, RNA1509_40425, RNA1509_41066, RNA1509_43505} {RNA1509_11385, RNA1509_25848, RNA1509_40425, RNA1509_41066, RNA1509_43505, RNA815_10921}
23. MligTC455_27294 23 0.49 Mlig455_044674

Neo: -

Age: logFC(26M/2M)=-0.815

0.953 - - - - 0.953 - Mlig455_044674 {REF} {Length: 5515} {RNA1509_47318} {RNA1310_10380.1} {RNA815_2914.1}
24. MligTC455_35077 476 9.91 Mlig455_045477, Mlig455_050957

Neo: -

Age: -

MRAS 0.953 - - - - - 0.953

Mlig455_045477 {REF} {Length: 2024} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=173.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=71.5]; ADP-ribosylation factor family [PF00025.23, score=37.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=37.2]; 50S ribosome-binding GTPase [PF01926.25, score=24.1]; Conserved hypothetical ATP binding protein [PF03029.19, score=21.6]; RsgA GTPase [PF03193.18, score=20.7]; Ferrous iron transport protein B [PF02421.20, score=20.3]} {Human: ENSG00000158186, MRAS, muscle RAS oncogene homolog, [RH, Score=236, Expect=5e-79]} {Mouse: ENSMUSG00000032470, Mras, muscle and microspikes RAS, [RH, Score=235, Expect=5e-79]} {Dmel: FBgn0003206, Ras64B, Ras oncogene at 64B, [Score=176, Expect=6e-56]} {Celegans: WBGene00004311, ras-2, GTP binding protein; R-RAS related, [RH, Score=242, Expect=9e-82]} {Smed: dd_Smed_v6_8100_0_2, dd_Smed_v6_8100_0_2, [RH, Score=205, Expect=3e-67]} {RNA1509_44073} {RNA1310_38461.1, RNA1509_44073} {RNA1509_44073, RNA815_26239}

Mlig455_050957 {REF} {Length: 920} {NoTransDecoderORF} {RNA1310_38461.1} {RNA815_23285}
25. MligTC455_51144 320 6.67 Mlig455_064475

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_064475 {REF} {Length: 2768} {TRANSSPLICED} {Pfam: RNA repair pathway DNA polymerase beta family [PF10127.11, score=40.6]} {RNA1509_58844} {RNA1310_17832.1, RNA1509_58844} {RNA1509_58844, RNA815_31196}
26. MligTC455_33676 298 6.2 Mlig455_046599

Neo: -

Age: -

Region-enriched R5: 1.328/0.01263

USP6NL 0.952 - - - - - 0.952 Mlig455_046599 {REF} {Length: 4162} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=160.3]} {Human: ENSG00000148429, USP6NL, USP6 N-terminal like, [RH, Score=285, Expect=7e-85]} {Mouse: ENSMUSG00000039046, Usp6nl, USP6 N-terminal like, [RH, Score=286, Expect=3e-85]} {Dmel: FBgn0020620, RN-tre, Related to the N terminus of tre oncogene, [RH, Score=234, Expect=2e-68]} {Celegans: WBGene00012894, tbc-17, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=270, Expect=5e-80]} {Smed: dd_Smed_v6_6068_0_2, dd_Smed_v6_6068_0_2, [Score=301, Expect=6e-93]} {RNA1509_31940, RNA1509_43770} {RNA1310_8692, RNA1509_43770} {RNA1509_43770, RNA815_15845}
27. MligTC455_45822 733 15.27 Mlig455_030111, Mlig455_030180

Neo: -

Age: -

Region-enriched R4: 2.554/0.00328

0.952 - - - - - 0.952

Mlig455_030111 {REF} {Length: 2896} {TRANSSPLICED} {Pfam: Mitotic-spindle organizing gamma-tubulin ring associated [PF12926.9, score=29.8]} {RNA1509_27378, RNA1509_41692} {RNA1310_18834, RNA1509_41692} {RNA1509_41692, RNA815_11733}

Mlig455_030180 {REF} {Length: 2897} {TRANSSPLICED} {Pfam: Mitotic-spindle organizing gamma-tubulin ring associated [PF12926.9, score=29.8]} {RNA1509_27378, RNA1509_49391} {RNA1310_18834, RNA1509_49391} {RNA1509_49391, RNA815_11733}
28. MligTC455_12931 210 4.37 Mlig455_006064

Neo: -

Age: -

Region-enriched R2: 2.426/0.02984

0.951 - - - - - 0.951 Mlig455_006064 {REF} {Length: 310} {NoTransDecoderORF} {RNA1509_40849} {RNA1310_48081, RNA1509_40849} {RNA1509_40849, RNA815_58879}
29. MligTC455_14654 67 1.39 Mlig455_015424

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_015424 {REF} {Length: 1213} {Pfam: Ectodermal ciliogenesis protein [PF15795.7, score=76.8]} {RNA1310_42665.1} {RNA815_17724}
30. MligTC455_28554 86 1.79 Mlig455_018185

Neo: -

Age: -

TASP1 0.951 - - - - - 0.951 Mlig455_018185 {REF} {Length: 856} {Pfam: Asparaginase [PF01112.20, score=44.5]} {Human: ENSG00000089123, TASP1, taspase 1, [Score=96.7, Expect=6e-23]} {Mouse: ENSMUSG00000039033, Tasp1, taspase, threonine aspartase 1, [Score=95.5, Expect=1e-22]} {Dmel: FBgn0263602, Tasp1, Taspase 1, [Score=73.9, Expect=2e-15]} {RNA1509_8921} {RNA1310_17191} {RNA815_26699}
31. MligTC455_33817 333 6.94 Mlig455_015731, Mlig455_049434

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.195

0.951 - - - - 0.951 -

Mlig455_015731 {REF} {Length: 1442} {Smed: dd_Smed_v6_21423_0_4, dd_Smed_v6_21423_0_4, [Score=54.7, Expect=8e-10]} {RNA1509_39158} {RNA1310_48634, RNA1509_39158} {RNA1509_39158, RNA815_30617}

Mlig455_049434 {REF} {Length: 1552} {NoTransDecoderORF} {RNA1509_39158} {RNA1310_48634} {RNA815_30617}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA