M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_52306

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_52306 261 5.44 Mlig455_067954

Neo: Irradiation

Age: -

 Mlig455_067954 {REF} {Length: 3415} {TRANSSPLICED} {RNA1509_40884} {RNA1310_4835} {RNA815_15279}

Cumulative graph for MligTC455_52306

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.073 2.992 0.27171 0.92214
RegionR2 0.632 2.992 0.45205 0.83968
RegionR3 0.14 2.992 0.71635 1.00000
RegionR4 1.118 2.992 0.19205 0.46812
RegionR5 0.698 2.992 0.30482 0.64141
RegionR6 -0.312 2.992 0.89738 1.00000
RegionR7 1.196 2.992 0.22186 0.84333
RegionR8 -5.545 2.992 0.05540 0.45991

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.801 2.992 0.68267 1.00000
RegenerationR2 0.735 2.992 0.15014 0.58326
RegenerationR3 1.026 2.992 0.09748 0.49986
RegenerationR4 0.359 2.992 0.57077 0.90180
RegenerationR5 1.203 2.992 0.01741 0.22981
RegenerationR6 1.37 2.992 0.03818 0.24363
RegenerationBL 3.602 2.992 0.00083 0.02014
RegenerationTP 3.207 2.992 0.05522 0.38260


Genes with expression patterns similar to MligTC455_52306

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_52306 261 5.44 Mlig455_067954

Neo: Irradiation

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_067954 {REF} {Length: 3415} {TRANSSPLICED} {RNA1509_40884} {RNA1310_4835} {RNA815_15279}
2. MligTC455_37971 714 14.87 Mlig455_066094

Neo: -

Age: Down-Up-Down

 PAQR3 2.437 0.711 - - 0.766 - 0.960 Mlig455_066094 {REF} {Length: 1384} {TRANSSPLICED} {Pfam: Haemolysin-III related [PF03006.22, score=159.0]} {Human: ENSG00000163291, PAQR3, progestin and adipoQ receptor family member 3, [RH, Score=224, Expect=8e-71]} {Mouse: ENSMUSG00000055725, Paqr3, progestin and adipoQ receptor family member III, [RH, Score=224, Expect=3e-71]} {Dmel: FBgn0038256, CG7530, [RH, Score=173, Expect=3e-51]} {Celegans: WBGene00013457, paqr-3, Progestin and AdipoQ Receptor family, [Score=151, Expect=6e-43]} {Smed: dd_Smed_v6_10397_0_1, dd_Smed_v6_10397_0_1, [Score=209, Expect=1e-65]} {RNA1509_26005, RNA1509_39815} {RNA1310_2767.1, RNA1509_26005, RNA1509_39815} {RNA1509_26005, RNA1509_39815, RNA815_9793.1}
3. MligTC455_42531 336 7 Mlig455_030594

Neo: Int S/G2/M

Age: Down-Up-Up

 ABT1 1.66 - - 0.708 - - 0.952 Mlig455_030594 {REF} {Length: 1307} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=19.4]} {Human: ENSG00000146109, ABT1, activator of basal transcription 1, [RH, Score=99.8, Expect=1e-24]} {Mouse: ENSMUSG00000036376, Abt1, activator of basal transcription 1, [RH, Score=102, Expect=8e-26]} {Dmel: FBgn0052708, CG32708, [RH, Score=97.4, Expect=2e-24]} {Celegans: WBGene00019005, F57B10.8, [RH, Score=87.4, Expect=2e-20]} {Smed: dd_Smed_v6_1929_0_1, dd_Smed_v6_1929_0_1, [RH, Score=101, Expect=2e-26]} {RNA1509_15723} {RNA1310_48173.1} {RNA815_22694}
4. MligTC455_15576 262 5.46 Mlig455_020478

Neo: -

Age: -

 0.983 - - - - - 0.983 Mlig455_020478 {REF} {Length: 2716} {RNA1310_78488} {RNA815_27799}
5. MligTC455_19505 530 11.03 Mlig455_065098

Neo: -

Age: -

 ULK2 0.979 - - - - - 0.979 Mlig455_065098 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=215.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=156.5]; Domain of unknown function (DUF3543) [PF12063.10, score=40.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; RIO1 family [PF01163.24, score=21.2]; Kinase-like [PF14531.8, score=17.9]} {Human: ENSG00000083290, ULK2, unc-51 like autophagy activating kinase 2, [RH, Score=344, Expect=5e-104]; ENSG00000177169, ULK1, unc-51 like autophagy activating kinase 1, [RH, Score=333, Expect=1e-99]} {Mouse: ENSMUSG00000004798, Ulk2, unc-51 like kinase 2, [RH, Score=340, Expect=1e-102]; ENSMUSG00000029512, Ulk1, unc-51 like kinase 1, [RH, Score=331, Expect=4e-99]} {Dmel: FBgn0260945, Atg1, Autophagy-related 1, [RH, Score=360, Expect=8e-112]} {Celegans: WBGene00006786, unc-51, Serine/threonine-protein kinase unc-51, [RH, Score=351, Expect=1e-108]} {Smed: dd_Smed_v6_10237_0_1, dd_Smed_v6_10237_0_1, [RH, Score=276, Expect=2e-86]} {RNA1509_51818, RNA1509_9723} {RNA1310_2515, RNA1509_51818} {RNA1509_51818, RNA815_10960.1}
6. MligTC455_34976 1568 32.66 Mlig455_037934

Neo: -

Age: -

Region-enriched R5: 1.150/0.00097

 EPN2 0.975 - - - - - 0.975 Mlig455_037934 {REF} {Length: 4839} {TRANSSPLICED} {Pfam: ENTH domain [PF01417.22, score=158.4]; ANTH domain [PF07651.18, score=28.2]; VHS domain [PF00790.21, score=23.9]} {Human: ENSG00000072134, EPN2, epsin 2, [Score=309, Expect=5e-97]; ENSG00000063245, EPN1, epsin 1, [Score=304, Expect=5e-95]} {Mouse: ENSMUSG00000035203, Epn1, epsin 1, [Score=311, Expect=7e-98]} {Dmel: FBgn0028582, lqf, liquid facets, [RH, Score=283, Expect=5e-85]} {Celegans: WBGene00001329, epn-1, EPsiN (Endocytic protein) homolog, [Score=265, Expect=4e-82]} {Smed: dd_Smed_v6_4779_0_1, dd_Smed_v6_4779_0_1, [RH, Score=280, Expect=3e-86]} {RNA1509_10151} {RNA1310_15538, RNA1509_10151} {RNA1509_10151, RNA815_19613}
7. MligTC455_16996 620 12.91 Mlig455_006276, Mlig455_013653

Neo: -

Age: -

Region-enriched R4: 2.208/0.00853

 KYAT3 0.967 - - - - - 0.967

Mlig455_006276 {REF} {Length: 2172} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=175.9]} {Human: ENSG00000137944, KYAT3, kynurenine aminotransferase 3, [Score=310, Expect=8e-102]} {Mouse: ENSMUSG00000040213, Kyat3, kynurenine aminotransferase 3, [Score=308, Expect=7e-101]} {Dmel: FBgn0037955, CG6950, [Score=300, Expect=2e-97]} {Celegans: WBGene00010984, nkat-3, Nematode Kynurenine AminoTransferase, [Score=239, Expect=1e-74]} {Smed: dd_Smed_v6_3796_0_1, dd_Smed_v6_3796_0_1, [Score=271, Expect=5e-87]} {RNA1509_5349} {RNA1310_15953} {RNA815_7537.1}

Mlig455_013653 {REF} {Length: 2162} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=175.5]} {Human: ENSG00000137944, KYAT3, kynurenine aminotransferase 3, [Score=313, Expect=5e-102]} {Mouse: ENSMUSG00000040213, Kyat3, kynurenine aminotransferase 3, [Score=311, Expect=7e-102]} {Dmel: FBgn0037955, CG6950, [Score=301, Expect=7e-98]} {Celegans: WBGene00010984, nkat-3, Nematode Kynurenine AminoTransferase, [Score=239, Expect=2e-74]} {Smed: dd_Smed_v6_3796_0_1, dd_Smed_v6_3796_0_1, [Score=272, Expect=4e-87]} {RNA1509_5349} {RNA1310_15953} {RNA815_7537.1}
8. MligTC455_37459 241 5.03 Mlig455_016238

Neo: -

Age: -

 MFSD3 0.965 - - - - - 0.965 Mlig455_016238 {REF} {Length: 2553} {Pfam: Major Facilitator Superfamily [PF07690.18, score=48.5]; Acetyl-coenzyme A transporter 1 [PF13000.9, score=36.9]} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [RH, Score=188, Expect=1e-54]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [RH, Score=211, Expect=2e-63]} {Dmel: FBgn0036662, CG9706, [Score=53.1, Expect=3e-07]} {Celegans: WBGene00012033, T26C5.3, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [RH, Score=299, Expect=7e-98]} {RNA1509_41389} {RNA1310_7558, RNA1509_41389} {RNA1509_41389, RNA815_19511}
9. MligTC455_32060 605 12.61 Mlig455_024932, Mlig455_024967

Neo: Int S/G2/M

Age: Up-Down-Down

 PHF8 0.964 - - - - - 0.964

Mlig455_024932 {REF} {Length: 7343} {TRANSSPLICED} {Pfam: Jumonji helical domain [PF17811.3, score=44.6]; Cupin-like domain [PF13621.8, score=26.8]; JmjC domain, hydroxylase [PF02373.24, score=26.0]} {Human: ENSG00000172943, PHF8, PHD finger protein 8, [Score=261, Expect=2e-74]; ENSG00000006459, KDM7A, lysine demethylase 7A, [Score=252, Expect=9e-72]} {Mouse: ENSMUSG00000041229, Phf8, PHD finger protein 8, [Score=257, Expect=2e-74]; ENSMUSG00000042599, Kdm7a, lysine (K)-specific demethylase 7A, [Score=248, Expect=1e-70]; ENSMUSG00000023350, 4921501E09Rik, RIKEN cDNA 4921501E09 gene, [Score=247, Expect=2e-70]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [Score=207, Expect=6e-56]} {Celegans: WBGene00017920, jmjd-1.2, Lysine-specific demethylase 7 homolog, [Score=214, Expect=4e-59]} {Smed: dd_Smed_v6_10417_0_1, dd_Smed_v6_10417_0_1, [Score=245, Expect=4e-74]} {RNA1509_16502} {RNA1310_8820.1} {RNA815_3231}

Mlig455_024967 {REF} {Length: 9049} {TRANSSPLICED} {Pfam: Jumonji helical domain [PF17811.3, score=43.6]; JmjC domain, hydroxylase [PF02373.24, score=24.8]; Cupin-like domain [PF13621.8, score=24.8]} {Human: ENSG00000172943, PHF8, PHD finger protein 8, [Score=242, Expect=1e-65]; ENSG00000006459, KDM7A, lysine demethylase 7A, [Score=237, Expect=2e-64]} {Mouse: ENSMUSG00000041229, Phf8, PHD finger protein 8, [Score=242, Expect=1e-68]; ENSMUSG00000042599, Kdm7a, lysine (K)-specific demethylase 7A, [Score=231, Expect=2e-62]} {Dmel: FBgn0037659, Kdm2, Lysine (K)-specific demethylase 2, [Score=206, Expect=4e-54]} {Celegans: WBGene00017920, jmjd-1.2, Lysine-specific demethylase 7 homolog, [Score=212, Expect=2e-56]} {Smed: dd_Smed_v6_10417_0_1, dd_Smed_v6_10417_0_1, [Score=246, Expect=3e-72]} {RNA1509_16502, RNA1509_59934} {RNA1310_8820.1, RNA1509_59934} {RNA1509_59934, RNA815_3231}
10. MligTC455_19133 139 2.9 Mlig455_050516

Neo: -

Age: logFC(26M/2M)=0.257

 ATE1 0.963 - - - - - 0.963 Mlig455_050516 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: Arginine-tRNA-protein transferase, C terminus [PF04377.17, score=163.2]; Arginine-tRNA-protein transferase, N terminus [PF04376.15, score=81.6]} {Human: ENSG00000107669, ATE1, arginyltransferase 1, [RH, Score=293, Expect=6e-93]} {Mouse: ENSMUSG00000030850, Ate1, arginyltransferase 1, [RH, Score=279, Expect=1e-87]} {Dmel: FBgn0025720, Ate1, [RH, Score=270, Expect=6e-85]} {Celegans: WBGene00010615, ate-1, Arginyl-tRNA--protein transferase 1, [RH, Score=231, Expect=3e-70]} {Smed: dd_Smed_v6_11679_0_1, dd_Smed_v6_11679_0_1, [RH, Score=254, Expect=6e-79]} {RNA1509_14961} {RNA1310_16832, RNA1509_14961} {RNA1509_14961, RNA815_7440.1}
11. MligTC455_44041 198 4.12 Mlig455_015299

Neo: -

Age: Down-Up-Up

 0.963 0.963 - - - - - Mlig455_015299 {REF} {Length: 2063} {RNA1509_26328} {RNA1310_12445.2} {RNA815_7981}
12. MligTC455_51511 239 4.98 Mlig455_037787

Neo: -

Age: Down-Up-Down

 BRDT 0.963 - - - - - 0.963 Mlig455_037787 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=112.2]; Bromodomain extra-terminal - transcription regulation [PF17035.7, score=95.2]} {Human: ENSG00000137948, BRDT, bromodomain testis associated, [Score=213, Expect=5e-58]} {Mouse: ENSMUSG00000029279, Brdt, bromodomain, testis-specific, [Score=212, Expect=7e-58]} {Dmel: FBgn0004656, fs(1)h, female sterile (1) homeotic, [Score=124, Expect=7e-29]} {Celegans: WBGene00022473, bet-1, Bromodomain-containing protein bet-1, [RH, Score=194, Expect=2e-52]} {Smed: dd_Smed_v6_8457_0_1, dd_Smed_v6_8457_0_1, [Score=268, Expect=4e-80]} {RNA1509_9248} {RNA1310_4151.1} {RNA815_11550}
13. MligTC455_31044 88 1.83 Mlig455_026848

Neo: -

Age: -

 PCYT2 0.962 - - - - - 0.962 Mlig455_026848 {REF} {Length: 2835} {Pfam: Cytidylyltransferase-like [PF01467.28, score=151.6]; FAD synthetase [PF06574.14, score=20.3]} {Human: ENSG00000185813, PCYT2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=440, Expect=3e-154]} {Mouse: ENSMUSG00000025137, Pcyt2, phosphate cytidylyltransferase 2, ethanolamine, [RH, Score=435, Expect=2e-152]} {Dmel: FBgn0032482, Pect, Phosphoethanolamine cytidylyltransferase, [RH, Score=434, Expect=4e-152]} {Celegans: WBGene00021352, Y37E3.11, [RH, Score=423, Expect=5e-148]} {Smed: dd_Smed_v6_3373_0_1, dd_Smed_v6_3373_0_1, [RH, Score=387, Expect=3e-134]} {RNA1509_15047} {RNA1310_17195.1, RNA1509_15047} {RNA1509_15047, RNA815_6039.1}
14. MligTC455_21149 316 6.58 Mlig455_039590

Neo: -

Age: -

Region-enriched R4: 1.700/0.01656

 0.96 - - - - - 0.960 Mlig455_039590 {REF} {Length: 4266} {TRANSSPLICED} {tRNA: Glu(TTC), score=70.7} {Pfam: Mediator complex subunit 25 von Willebrand factor type A [PF11265.10, score=33.6]} {Smed: dd_Smed_v6_10165_0_1, dd_Smed_v6_10165_0_1, [RH, Score=89.7, Expect=2e-18]} {RNA1509_16407} {RNA1310_18658} {RNA815_16377}
15. MligTC455_53304 285 5.93 Mlig455_029251

Neo: Irradiation

Age: Up-Down-Down

 PKN2 0.96 - - - - - 0.960 Mlig455_029251 {REF} {Length: 5848} {Pfam: Protein kinase domain [PF00069.27, score=200.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.4]; Hr1 repeat [PF02185.18, score=53.6]; Protein kinase C terminal domain [PF00433.26, score=38.2]; Chromate resistance exported protein [PF09828.11, score=22.6]; Kinase-like [PF14531.8, score=21.8]} {Human: ENSG00000065243, PKN2, protein kinase N2, [RH, Score=577, Expect=0.0]} {Mouse: ENSMUSG00000004591, Pkn2, protein kinase N2, [RH, Score=573, Expect=0.0]} {Dmel: FBgn0020621, Pkn, Protein kinase N, [Score=466, Expect=1e-153]} {Celegans: WBGene00009793, pkn-1, Protein Kinase N (PKN) homolog, [RH, Score=449, Expect=5e-142]} {Smed: dd_Smed_v6_7015_0_1, dd_Smed_v6_7015_0_1, [RH, Score=334, Expect=2e-98]} {RNA1509_11806} {RNA1310_1971.1} {RNA815_4789}
16. MligTC455_19849 803 16.74 Mlig455_001790

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_001790 {REF} {Length: 3366} {TRANSSPLICED} {Pfam: Peptidase family M3 [PF01432.22, score=55.7]} {RNA1509_4620} {RNA1310_8121, RNA1509_4620} {RNA1509_4620, RNA815_2560.1}
17. MligTC455_37863 213 4.44 Mlig455_015363

Neo: -

Age: Up-Down-Down

 NBAS 0.959 - - - - - 0.959 Mlig455_015363 {REF} {Length: 8517} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=51.4]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=384, Expect=1e-106]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=413, Expect=6e-116]} {Celegans: WBGene00008990, smgl-1, [RH, Score=55.5, Expect=5e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=206, Expect=1e-52]} {RNA1509_11685, RNA1509_55641} {RNA1310_353.1, RNA1509_11685, RNA1509_55641} {RNA1509_11685, RNA1509_55641, RNA815_138}
18. MligTC455_41775 554 11.54 Mlig455_012339, Mlig455_034963

Neo: -

Age: -

 TMEM104 0.959 - - - - - 0.959

Mlig455_012339 {REF} {Length: 2743} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=62.4]; Tryptophan/tyrosine permease family [PF03222.15, score=21.7]} {Human: ENSG00000109066, TMEM104, transmembrane protein 104, [RH, Score=390, Expect=4e-130]} {Mouse: ENSMUSG00000045980, Tmem104, transmembrane protein 104, [RH, Score=381, Expect=7e-127]} {Dmel: FBgn0036988, CG5262, [RH, Score=377, Expect=3e-125]} {Celegans: WBGene00007267, C03A3.2, Transmembrane protein 104 homolog, [RH, Score=265, Expect=3e-82]} {Smed: dd_Smed_v6_7100_0_1, dd_Smed_v6_7100_0_1, [RH, Score=358, Expect=4e-118]} {RNA1509_26217} {RNA1310_16504} {RNA815_6695}

Mlig455_034963 {REF} {Length: 2758} {TRANSSPLICED} {Pfam: Transmembrane amino acid transporter protein [PF01490.20, score=60.5]; Tryptophan/tyrosine permease family [PF03222.15, score=20.9]} {Human: ENSG00000109066, TMEM104, transmembrane protein 104, [RH, Score=389, Expect=1e-129]} {Mouse: ENSMUSG00000045980, Tmem104, transmembrane protein 104, [RH, Score=378, Expect=1e-125]} {Dmel: FBgn0036988, CG5262, [RH, Score=374, Expect=3e-124]} {Celegans: WBGene00007267, C03A3.2, Transmembrane protein 104 homolog, [RH, Score=261, Expect=7e-81]} {Smed: dd_Smed_v6_7100_0_1, dd_Smed_v6_7100_0_1, [RH, Score=355, Expect=1e-116]} {RNA1509_26217, RNA1509_36871} {RNA1310_16504, RNA1509_26217, RNA1509_36871} {RNA1509_26217, RNA1509_36871, RNA815_6695}
19. MligTC455_16748 272 5.66 Mlig455_044133

Neo: Irradiation

Age: Down-Up-Down

 PPP1R8 0.956 - - - - - 0.956 Mlig455_044133 {REF} {Length: 2654} {Pfam: FHA domain [PF00498.28, score=54.4]} {Human: ENSG00000117751, PPP1R8, protein phosphatase 1 regulatory subunit 8, [RH, Score=280, Expect=3e-91]} {Mouse: ENSMUSG00000028882, Ppp1r8, protein phosphatase 1, regulatory subunit 8, [RH, Score=278, Expect=2e-90]} {Dmel: FBgn0026402, NiPp1, Nuclear inhibitor of Protein phosphatase 1, [Score=269, Expect=2e-86]} {Celegans: WBGene00015233, B0511.7, [Score=160, Expect=9e-46]} {Smed: dd_Smed_v6_6770_0_1, dd_Smed_v6_6770_0_1, [Score=296, Expect=1e-97]} {RNA1509_31655} {RNA1310_7769.2} {RNA815_6925.1}
20. MligTC455_33676 298 6.2 Mlig455_046599

Neo: -

Age: -

Region-enriched R5: 1.328/0.01263

 USP6NL 0.956 - - - - - 0.956 Mlig455_046599 {REF} {Length: 4162} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=160.3]} {Human: ENSG00000148429, USP6NL, USP6 N-terminal like, [RH, Score=285, Expect=7e-85]} {Mouse: ENSMUSG00000039046, Usp6nl, USP6 N-terminal like, [RH, Score=286, Expect=3e-85]} {Dmel: FBgn0020620, RN-tre, Related to the N terminus of tre oncogene, [RH, Score=234, Expect=2e-68]} {Celegans: WBGene00012894, tbc-17, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=270, Expect=5e-80]} {Smed: dd_Smed_v6_6068_0_2, dd_Smed_v6_6068_0_2, [Score=301, Expect=6e-93]} {RNA1509_31940, RNA1509_43770} {RNA1310_8692, RNA1509_43770} {RNA1509_43770, RNA815_15845}
21. MligTC455_47468 394 8.21 Mlig455_005218

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=0.781

 0.956 - - - - - 0.956 Mlig455_005218 {REF} {Length: 4129} {TRANSSPLICED} {RNA1509_36445} {RNA1310_3947} {RNA815_1458}
22. MligTC455_09291 59 1.22 Mlig455_057548

Neo: -

Age: -

 0.955 - - - - - 0.955 Mlig455_057548 {REF} {Length: 1906} {Pfam: Universal stress protein family [PF00582.28, score=98.0]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=119, Expect=2e-34]} {RNA1509_38417} {RNA1310_81147} {RNA815_23823}
23. MligTC455_17074 854 17.79 Mlig455_039446, Mlig455_039491

Neo: -

Age: -

Region-enriched R5: 1.202/0.00436

 RTCB 0.954 - - - - - 0.954

Mlig455_039446 {REF} {Length: 3848} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187, RNA1509_10458} {RNA1509_10458, RNA815_12172}

Mlig455_039491 {REF} {Length: 3869} {TRANSSPLICED} {Pfam: tRNA-splicing ligase RtcB [PF01139.19, score=495.3]} {Human: ENSG00000100220, RTCB, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000001783, Rtcb, RNA 2',3'-cyclic phosphate and 5'-OH ligase, [RH, Score=880, Expect=0.0]} {Dmel: FBgn0032781, RtcB, RtcB-like, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00008877, rtcb-1, tRNA-splicing ligase RtcB homolog, [RH, Score=805, Expect=0.0]} {Smed: dd_Smed_v6_5115_0_1, dd_Smed_v6_5115_0_1, [RH, Score=876, Expect=0.0]} {RNA1509_10458} {RNA1310_18187} {RNA815_12172}
24. MligTC455_20224 1225 25.53 Mlig455_009689, Mlig455_063053

Neo: -

Age: -

 NAGK 0.953 - - - - - 0.953

Mlig455_009689 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: BadF/BadG/BcrA/BcrD ATPase family [PF01869.22, score=65.2]} {Human: ENSG00000124357, NAGK, N-acetylglucosamine kinase, [RH, Score=201, Expect=6e-61]} {Mouse: ENSMUSG00000034744, Nagk, N-acetylglucosamine kinase, [RH, Score=205, Expect=2e-62]} {Dmel: FBgn0038321, CG6218, [RH, Score=193, Expect=4e-58]} {Celegans: WBGene00021057, W06B4.2, [RH, Score=133, Expect=2e-34]} {Smed: dd_Smed_v6_643_0_1, dd_Smed_v6_643_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_32084, RNA1509_59002} {RNA1310_24603, RNA1509_32084, RNA1509_59002} {RNA1509_32084, RNA1509_59002, RNA815_11105}

Mlig455_063053 {REF} {Length: 2927} {TRANSSPLICED} {Pfam: BadF/BadG/BcrA/BcrD ATPase family [PF01869.22, score=65.3]} {Human: ENSG00000124357, NAGK, N-acetylglucosamine kinase, [RH, Score=200, Expect=2e-60]} {Mouse: ENSMUSG00000034744, Nagk, N-acetylglucosamine kinase, [RH, Score=204, Expect=5e-62]} {Dmel: FBgn0038321, CG6218, [RH, Score=192, Expect=1e-57]} {Celegans: WBGene00021057, W06B4.2, [RH, Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_643_0_1, dd_Smed_v6_643_0_1, [RH, Score=134, Expect=8e-36]} {RNA1509_33354} {RNA1310_24603} {RNA815_11105}
25. MligTC455_25201 771 16.07 Mlig455_067420, Mlig455_069560

Neo: -

Age: -

 SETD3 0.953 - - - - - 0.953

Mlig455_067420 {REF} {Length: 3064} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.0]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=189, Expect=5e-53]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=191, Expect=4e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=1e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=137, Expect=1e-35]} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1310_16143.1, RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782} {RNA1509_49950, RNA1509_50005, RNA1509_51716, RNA1509_51955, RNA1509_56782, RNA815_6937}

Mlig455_069560 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: SET domain [PF00856.30, score=37.7]; Rubisco LSMT substrate-binding [PF09273.13, score=25.6]} {Human: ENSG00000183576, SETD3, SET domain containing 3, [RH, Score=187, Expect=3e-52]} {Mouse: ENSMUSG00000056770, Setd3, SET domain containing 3, [RH, Score=192, Expect=2e-54]} {Dmel: FBgn0052732, CG32732, [RH, Score=127, Expect=2e-31]} {Smed: dd_Smed_v6_12202_0_1, dd_Smed_v6_12202_0_1, [RH, Score=138, Expect=7e-36]} {RNA1509_49950} {RNA1310_16143.1} {RNA815_6937}
26. MligTC455_25276 124 2.59 Mlig455_024081

Neo: -

Age: -

Region-enriched R4: 3.721/0.04372
Region-enriched R5: 3.389/0.00359

 0.953 - - - - - 0.953 Mlig455_024081 {REF} {Length: 1384} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=47.3]; Complex1_LYR-like [PF13233.8, score=20.4]} {RNA1509_37248} {RNA1310_65243} {RNA815_33572}
27. MligTC455_03370 378 7.87 Mlig455_065258

Neo: -

Age: -

 CYB561D1 0.952 - - - - - 0.952 Mlig455_065258 {REF} {Length: 898} {TRANSSPLICED} {Pfam: Eukaryotic cytochrome b561 [PF03188.18, score=98.2]} {Human: ENSG00000174151, CYB561D1, cytochrome b561 family member D1, [RH, Score=116, Expect=1e-31]} {Mouse: ENSMUSG00000048796, Cyb561d1, cytochrome b-561 domain containing 1, [RH, Score=113, Expect=9e-31]} {Smed: dd_Smed_v6_11156_0_1, dd_Smed_v6_11156_0_1, [RH, Score=77.4, Expect=2e-17]} {RNA1509_7074} {RNA1310_43066} {RNA815_21777}
28. MligTC455_33519 77 1.61 Mlig455_035174

Neo: -

Age: -

 RHBDL3 0.951 0.951 - - - - - Mlig455_035174 {REF} {Length: 3074} {Pfam: Rhomboid family [PF01694.24, score=117.4]; EF-hand domain pair [PF13499.8, score=24.1]; EF-hand domain pair [PF13833.8, score=21.9]; EF hand [PF13202.8, score=20.3]; EF hand [PF00036.34, score=20.1]} {Human: ENSG00000141314, RHBDL3, rhomboid like 3, [Score=171, Expect=1e-48]; ENSG00000158315, RHBDL2, rhomboid like 2, [Score=171, Expect=2e-49]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=188, Expect=4e-56]} {Dmel: FBgn0020248, stet, stem cell tumor, [Score=177, Expect=4e-50]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=145, Expect=1e-39]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [RH, Score=332, Expect=5e-111]} {RNA1310_72334} {RNA815_32924}
29. MligTC455_44777 598 12.45 Mlig455_065381

Neo: -

Age: logFC(26M/2M)=0.209

 SPART 0.951 - - - - - 0.951 Mlig455_065381 {REF} {Length: 2661} {TRANSSPLICED} {Pfam: Senescence-associated protein [PF06911.14, score=58.7]} {Human: ENSG00000133104, SPART, spartin, [Score=56.2, Expect=9e-08]} {Mouse: ENSMUSG00000036580, Spg20, spastic paraplegia 20, spartin (Troyer syndrome) homolog (human), [Score=100, Expect=9e-22]} {RNA1509_10450} {RNA1310_9098} {RNA815_5367}
30. MligTC455_42764 351 7.31 Mlig455_031291, Mlig455_031338

Neo: -

Age: -

Region-enriched R4: 2.254/0.02916
Region-enriched R5: 2.042/0.00169

 ALDH16A1 0.95 - - - - - 0.950

Mlig455_031291 {REF} {Length: 2722} {TRANSSPLICED} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=65.1]} {Human: ENSG00000161618, ALDH16A1, aldehyde dehydrogenase 16 family member A1, [Score=54.3, Expect=6e-07]} {RNA1509_14483} {RNA1310_10423.1} {RNA815_28466}

Mlig455_031338 {REF} {Length: 2766} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=66.0]} {RNA1509_14483, RNA1509_19770} {RNA1310_10423.1, RNA1509_19770} {RNA1509_19770, RNA815_28466}
31. MligTC455_45850 190 3.96 Mlig455_050377

Neo: -

Age: -

 MPP6 0.95 0.950 - - - - - Mlig455_050377 {REF} {Length: 2638} {TRANSSPLICED} {Pfam: PDZ domain [PF17820.3, score=32.3]; PDZ domain [PF00595.26, score=24.8]; Guanylate kinase [PF00625.23, score=20.0]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [Score=93.2, Expect=3e-19]; ENSG00000108852, MPP2, membrane palmitoylated protein 2, [Score=89.4, Expect=6e-18]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=99.8, Expect=2e-21]} {Dmel: FBgn0250785, vari, varicose, [Score=91.7, Expect=5e-19]} {Celegans: WBGene00002991, lin-2, [Score=86.7, Expect=2e-17]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [Score=95.1, Expect=3e-20]} {RNA1310_22093} {RNA815_14472}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA