TomoSeq data search

Data search

Results for MligTC455_19136

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19136

253

5.27

Mlig455_044611

Neo: Irradiation

Age: -

LARS2

Mlig455_044611 {REF} {Length: 3788} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=104.1]; tRNA synthetases class I (M) [PF09334.13, score=67.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=20.0]} {Human: ENSG00000011376, LARS2, leucyl-tRNA synthetase 2, mitochondrial, [RH, Score=504, Expect=2e-166]} {Mouse: ENSMUSG00000035202, Lars2, leucyl-tRNA synthetase, mitochondrial, [RH, Score=498, Expect=2e-164]} {Dmel: FBgn0027085, LeuRS-m, Leucyl-tRNA synthetase, mitochondrial, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00003074, lars-2, Leucyl Amino-acyl tRNA Synthetase, [RH, Score=391, Expect=4e-124]} {Smed: dd_Smed_v6_9705_0_1, dd_Smed_v6_9705_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_22638} {RNA1310_5139.1} {RNA815_10970}

Cumulative graph for MligTC455_19136

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.091	2.771	0.93186	1.00000
RegionR2	1.658	2.771	0.01967	0.15158
RegionR3	0.678	2.771	0.20150	0.74134
RegionR4	-0.685	2.771	0.26842	0.57338
RegionR5	0.042	2.771	0.92729	1.00000
RegionR6	0.751	2.771	0.17252	0.73080
RegionR7	-1.086	2.771	0.26965	0.90097
RegionR8	-1.265	2.771	0.32979	0.96281

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.814	2.771	0.38100	1.00000
RegenerationR2	0.31	2.771	0.58436	0.90859
RegenerationR3	0.494	2.771	0.44425	0.82966
RegenerationR4	-0.204	2.771	0.76392	0.97434
RegenerationR5	0.621	2.771	0.26524	0.69685
RegenerationR6	-0.368	2.771	0.60770	0.87275
RegenerationBL	-0.641	2.771	0.64537	0.98328
RegenerationTP	1.971	2.771	0.06815	0.41976

Genes with expression patterns similar to MligTC455_19136

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19136	253	5.27	Mlig455_044611	Neo: Irradiation Age: -	LARS2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_044611 {REF} {Length: 3788} {TRANSSPLICED} {Pfam: tRNA synthetases class I (I, L, M and V) [PF00133.24, score=104.1]; tRNA synthetases class I (M) [PF09334.13, score=67.6]; Anticodon-binding domain of tRNA ligase [PF08264.15, score=20.0]} {Human: ENSG00000011376, LARS2, leucyl-tRNA synthetase 2, mitochondrial, [RH, Score=504, Expect=2e-166]} {Mouse: ENSMUSG00000035202, Lars2, leucyl-tRNA synthetase, mitochondrial, [RH, Score=498, Expect=2e-164]} {Dmel: FBgn0027085, LeuRS-m, Leucyl-tRNA synthetase, mitochondrial, [RH, Score=540, Expect=0.0]} {Celegans: WBGene00003074, lars-2, Leucyl Amino-acyl tRNA Synthetase, [RH, Score=391, Expect=4e-124]} {Smed: dd_Smed_v6_9705_0_1, dd_Smed_v6_9705_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_22638} {RNA1310_5139.1} {RNA815_10970}
2.	MligTC455_37691	84	1.76	Mlig455_050364	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_050364 {REF} {Length: 832} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_54802} {RNA815_64986}
3.	MligTC455_36164	663	13.8	Mlig455_022542, Mlig455_063673	Neo: - Age: Down-Up-Down	AC129492.3	0.957	-	-	-	-	-	0.957	Mlig455_022542 {REF} {Length: 1477} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=42.2]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=40.8, Expect=1e-05]} {RNA1509_35284} {RNA1310_53993} {RNA815_28259.1} Mlig455_063673 {REF} {Length: 2989} {TRANSSPLICED} {Pfam: Synaptobrevin [PF00957.23, score=102.7]} {Human: ENSG00000263620, AC129492.3, novel protein, [Score=67.4, Expect=4e-15]; ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=67.0, Expect=6e-15]} {Mouse: ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=67.4, Expect=9e-15]; ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=66.6, Expect=5e-15]} {Celegans: WBGene00004898, snb-2, SyNaptoBrevin related, [Score=76.3, Expect=5e-19]} {Smed: dd_Smed_v6_6394_0_1, dd_Smed_v6_6394_0_1, [Score=66.2, Expect=3e-15]} {RNA1509_35284} {RNA1310_53993, RNA1509_35284} {RNA1509_35284, RNA815_28259.1}
4.	MligTC455_35423	1070	22.28	Mlig455_043797	Neo: Int S/G2/M Age: Up-Down-Up	DIMT1	0.951	-	0.951	-	-	-	-	Mlig455_043797 {REF} {Length: 1409} {TRANSSPLICED} {Pfam: Ribosomal RNA adenine dimethylase [PF00398.22, score=216.0]; Methyltransferase domain [PF13649.8, score=31.6]; Methyltransferase domain [PF08241.14, score=21.8]; Methyltransferase small domain [PF05175.16, score=20.2]; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) [PF01135.21, score=20.0]} {Human: ENSG00000086189, DIMT1, DIM1 dimethyladenosine transferase 1 homolog, [RH, Score=350, Expect=8e-121]} {Mouse: ENSMUSG00000021692, Dimt1, DIM1 dimethyladenosine transferase 1-like (S. cerevisiae), [RH, Score=351, Expect=3e-121]} {Dmel: FBgn0039627, CG11837, [RH, Score=361, Expect=2e-125]} {Celegans: WBGene00008455, E02H1.1, Probable dimethyladenosine transferase, [RH, Score=333, Expect=2e-114]} {Smed: dd_Smed_v6_5268_0_1, dd_Smed_v6_5268_0_1, [RH, Score=337, Expect=9e-116]} {RNA1509_18691, RNA1509_9015} {RNA1310_23608.1, RNA1509_18691, RNA1509_9015} {RNA1509_18691, RNA1509_9015, RNA815_9867}
5.	MligTC455_06086	286	5.97	Mlig455_007867	Neo: - Age: Down-Down-Down	PIGK	0.95	-	-	-	-	-	0.950	Mlig455_007867 {REF} {Length: 3204} {Pfam: Peptidase C13 family [PF01650.20, score=144.0]} {Human: ENSG00000142892, PIGK, phosphatidylinositol glycan anchor biosynthesis class K, [RH, Score=380, Expect=6e-132]} {Mouse: ENSMUSG00000039047, Pigk, phosphatidylinositol glycan anchor biosynthesis, class K, [RH, Score=382, Expect=3e-132]} {Dmel: FBgn0023545, PIG-K, Phosphatidylinositol glycan anchor biosynthesis class K, [RH, Score=395, Expect=8e-138]} {Celegans: WBGene00011482, hpo-4, Putative GPI-anchor transamidase, [RH, Score=309, Expect=1e-104]} {Smed: dd_Smed_v6_6456_0_1, dd_Smed_v6_6456_0_1, [RH, Score=406, Expect=1e-142]} {RNA1509_12412} {RNA1310_13673} {RNA815_6052}

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