TomoSeq data search

Data search

Results for MligTC455_19201

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19201

3607

75.15

Mlig455_014189, Mlig455_014210

Neo: -

Age: -

OGDH

Mlig455_014189 {REF} {Length: 3990} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=215.3]; Dehydrogenase E1 component [PF00676.22, score=185.3]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=171.4]; 2-oxoglutarate dehydrogenase N-terminus [PF16078.7, score=58.7]} {Human: ENSG00000105953, OGDH, oxoglutarate dehydrogenase, [RH, Score=1196, Expect=0.0]; ENSG00000197444, OGDHL, oxoglutarate dehydrogenase like, [RH, Score=1185, Expect=0.0]} {Mouse: ENSMUSG00000020456, Ogdh, oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), [RH, Score=1190, Expect=0.0]; ENSMUSG00000021913, Ogdhl, oxoglutarate dehydrogenase-like, [RH, Score=1188, Expect=0.0]} {Dmel: FBgn0010352, Nc73EF, Neural conserved at 73EF, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00020679, ogdh-1, 2-oxoglutarate dehydrogenase, mitochondrial, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_1869_0_1, dd_Smed_v6_1869_0_1, [RH, Score=1356, Expect=0.0]} {RNA1509_10790} {RNA1310_8462} {RNA815_658.1}

Mlig455_014210 {REF} {Length: 4131} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=250.7]; Transketolase, pyrimidine binding domain [PF02779.26, score=215.2]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=171.3]; 2-oxoglutarate dehydrogenase N-terminus [PF16078.7, score=58.5]} {Human: ENSG00000105953, OGDH, oxoglutarate dehydrogenase, [RH, Score=1252, Expect=0.0]; ENSG00000197444, OGDHL, oxoglutarate dehydrogenase like, [RH, Score=1236, Expect=0.0]} {Mouse: ENSMUSG00000021913, Ogdhl, oxoglutarate dehydrogenase-like, [RH, Score=1244, Expect=0.0]; ENSMUSG00000020456, Ogdh, oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), [RH, Score=1243, Expect=0.0]} {Dmel: FBgn0010352, Nc73EF, Neural conserved at 73EF, [RH, Score=1249, Expect=0.0]} {Celegans: WBGene00020679, ogdh-1, 2-oxoglutarate dehydrogenase, mitochondrial, [RH, Score=1189, Expect=0.0]} {Smed: dd_Smed_v6_1869_0_1, dd_Smed_v6_1869_0_1, [RH, Score=1404, Expect=0.0]} {RNA1509_775} {RNA1310_8462} {RNA815_658.1}

Cumulative graph for MligTC455_19201

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.354	6.397	0.57820	1.00000
RegionR2	-0.063	6.397	0.86660	1.00000
RegionR3	-0.034	6.397	0.91338	1.00000
RegionR4	0.875	6.397	0.01680	0.08990
RegionR5	-0.15	6.397	0.61600	0.97260
RegionR6	-0.263	6.397	0.40678	0.97634
RegionR7	0.092	6.397	0.78466	1.00000
RegionR8	-0.104	6.397	0.79691	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.584	6.397	0.52765	1.00000
RegenerationR2	0.738	6.397	0.04293	0.34165
RegenerationR3	0.131	6.397	0.73193	0.95845
RegenerationR4	-0.773	6.397	0.05867	0.38868
RegenerationR5	-0.192	6.397	0.61033	0.91438
RegenerationR6	0.028	6.397	0.94280	1.00000
RegenerationBL	0.004	6.397	0.99227	1.00000
RegenerationTP	-0.465	6.397	0.26127	0.70898

Genes with expression patterns similar to MligTC455_19201

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19201	3607	75.15	Mlig455_014189, Mlig455_014210	Neo: - Age: -	OGDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014189 {REF} {Length: 3990} {TRANSSPLICED} {Pfam: Transketolase, pyrimidine binding domain [PF02779.26, score=215.3]; Dehydrogenase E1 component [PF00676.22, score=185.3]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=171.4]; 2-oxoglutarate dehydrogenase N-terminus [PF16078.7, score=58.7]} {Human: ENSG00000105953, OGDH, oxoglutarate dehydrogenase, [RH, Score=1196, Expect=0.0]; ENSG00000197444, OGDHL, oxoglutarate dehydrogenase like, [RH, Score=1185, Expect=0.0]} {Mouse: ENSMUSG00000020456, Ogdh, oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), [RH, Score=1190, Expect=0.0]; ENSMUSG00000021913, Ogdhl, oxoglutarate dehydrogenase-like, [RH, Score=1188, Expect=0.0]} {Dmel: FBgn0010352, Nc73EF, Neural conserved at 73EF, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00020679, ogdh-1, 2-oxoglutarate dehydrogenase, mitochondrial, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_1869_0_1, dd_Smed_v6_1869_0_1, [RH, Score=1356, Expect=0.0]} {RNA1509_10790} {RNA1310_8462} {RNA815_658.1} Mlig455_014210 {REF} {Length: 4131} {TRANSSPLICED} {Pfam: Dehydrogenase E1 component [PF00676.22, score=250.7]; Transketolase, pyrimidine binding domain [PF02779.26, score=215.2]; 2-oxoglutarate dehydrogenase C-terminal [PF16870.7, score=171.3]; 2-oxoglutarate dehydrogenase N-terminus [PF16078.7, score=58.5]} {Human: ENSG00000105953, OGDH, oxoglutarate dehydrogenase, [RH, Score=1252, Expect=0.0]; ENSG00000197444, OGDHL, oxoglutarate dehydrogenase like, [RH, Score=1236, Expect=0.0]} {Mouse: ENSMUSG00000021913, Ogdhl, oxoglutarate dehydrogenase-like, [RH, Score=1244, Expect=0.0]; ENSMUSG00000020456, Ogdh, oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide), [RH, Score=1243, Expect=0.0]} {Dmel: FBgn0010352, Nc73EF, Neural conserved at 73EF, [RH, Score=1249, Expect=0.0]} {Celegans: WBGene00020679, ogdh-1, 2-oxoglutarate dehydrogenase, mitochondrial, [RH, Score=1189, Expect=0.0]} {Smed: dd_Smed_v6_1869_0_1, dd_Smed_v6_1869_0_1, [RH, Score=1404, Expect=0.0]} {RNA1509_775} {RNA1310_8462} {RNA815_658.1}
2.	MligTC455_43615	1202	25.04	Mlig455_024404	Neo: - Age: logFC(26M/2M)=-0.268	CFAP57	1.756	-	-	-	0.790	-	0.966	Mlig455_024404 {REF} {Length: 5259} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=66.8]; Crescentin protein [PF19220.2, score=26.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=23.3]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=19.0]} {Human: ENSG00000243710, CFAP57, cilia and flagella associated protein 57, [RH, Score=1363, Expect=0.0]} {Mouse: ENSMUSG00000028730, Cfap57, cilia and flagella associated protein 57, [RH, Score=1360, Expect=0.0]} {Dmel: FBgn0034745, CG4329, [RH, Score=494, Expect=2e-154]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=55.5, Expect=2e-07]} {Smed: dd_Smed_v6_3323_0_1, dd_Smed_v6_3323_0_1, [RH, Score=1619, Expect=0.0]} {RNA1509_18223, RNA1509_836} {RNA1310_1737, RNA1509_18223, RNA1509_836} {RNA1509_18223, RNA1509_836, RNA815_558}
3.	MligTC455_37384	166	3.47	Mlig455_030537	Neo: - Age: Down-Up-Up	APCDD1	1.737	-	-	-	-	0.785	0.952	Mlig455_030537 {REF} {Length: 1885} {Pfam: Adenomatosis polyposis coli down-regulated 1 [PF14921.8, score=207.7]} {Human: ENSG00000154856, APCDD1, APC down-regulated 1, [RH, Score=232, Expect=8e-69]} {Mouse: ENSMUSG00000071847, Apcdd1, adenomatosis polyposis coli down-regulated 1, [RH, Score=228, Expect=2e-67]} {RNA1509_38294} {RNA1310_16871} {RNA815_39513}
4.	MligTC455_43631	826	17.2	Mlig455_015779	Neo: - Age: -	OFD1	1.725	-	-	-	0.772	0.953	-	Mlig455_015779 {REF} {Length: 3577} {TRANSSPLICED} {Pfam: LisH [PF16045.7, score=42.8]} {Human: ENSG00000046651, OFD1, OFD1, centriole and centriolar satellite protein, [RH, Score=157, Expect=2e-38]} {Mouse: ENSMUSG00000040586, Ofd1, OFD1, centriole and centriolar satellite protein, [RH, Score=159, Expect=4e-39]} {Smed: dd_Smed_v6_13339_0_1, dd_Smed_v6_13339_0_1, [RH, Score=197, Expect=6e-52]} {RNA1509_24490, RNA1509_3300, RNA1509_58865} {RNA1310_1944.1, RNA1509_24490, RNA1509_3300, RNA1509_58865} {RNA1509_24490, RNA1509_3300, RNA1509_58865, RNA815_5819}
5.	MligTC455_43632	826	17.2	Mlig455_049505	Neo: - Age: Up-Down-Down		1.725	-	-	-	0.772	0.953	-	Mlig455_049505 {REF} {Length: 2510} {RNA1509_37292} {RNA1310_20906} {RNA815_16506}
6.	MligTC455_35848	9643	200.9	Mlig455_045744, Mlig455_063784	Neo: - Age: - Region-enriched R4: 1.068/0.00000	MGST3	0.962	-	-	-	-	0.962	-	Mlig455_045744 {REF} {Length: 285} {Pfam: Cysteine rich repeat [PF02363.21, score=23.6]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=46.2, Expect=7e-07]} {RNA815_1634.9} Mlig455_063784 {REF} {Length: 1135} {TRANSSPLICED} {Pfam: MAPEG family [PF01124.20, score=76.8]} {Human: ENSG00000143198, MGST3, microsomal glutathione S-transferase 3, [RH, Score=117, Expect=5e-34]} {Mouse: ENSMUSG00000026688, Mgst3, microsomal glutathione S-transferase 3, [RH, Score=119, Expect=6e-35]} {Smed: dd_Smed_v6_942_0_1, dd_Smed_v6_942_0_1, [RH, Score=136, Expect=6e-42]} {RNA1509_1794, RNA1509_27929, RNA1509_56967} {RNA1310_31435.1, RNA1509_1794, RNA1509_27929, RNA1509_56967} {RNA1509_1794, RNA1509_27929, RNA1509_56967, RNA815_13894.1}
7.	MligTC455_23015	246	5.13	Mlig455_044423	Neo: - Age: -	ACTR10	0.961	-	-	0.961	-	-	-	Mlig455_044423 {REF} {Length: 2401} {Pfam: Actin [PF00022.21, score=165.6]} {Human: ENSG00000131966, ACTR10, actin related protein 10 homolog, [RH, Score=330, Expect=1e-109]} {Mouse: ENSMUSG00000021076, Actr10, ARP10 actin-related protein 10, [RH, Score=333, Expect=4e-111]} {Dmel: FBgn0031050, Arp10, Actin-related protein 10, [RH, Score=270, Expect=3e-87]} {Celegans: WBGene00016793, arp-11, Actin-Related Proteins, [RH, Score=139, Expect=3e-37]} {Smed: dd_Smed_v6_2141_0_3, dd_Smed_v6_2141_0_3, [RH, Score=276, Expect=3e-89]} {RNA1509_14893} {RNA1310_14286} {RNA815_22726}
8.	MligTC455_35846	19286	401.8	Mlig455_000105, Mlig455_063775	Neo: - Age: - Region-enriched R4: 1.051/0.00000	MGST3	0.961	-	-	-	-	0.961	-	Mlig455_000105 {REF} {Length: 1125} {TRANSSPLICED} {Pfam: MAPEG family [PF01124.20, score=76.8]} {Human: ENSG00000143198, MGST3, microsomal glutathione S-transferase 3, [RH, Score=117, Expect=5e-34]} {Mouse: ENSMUSG00000026688, Mgst3, microsomal glutathione S-transferase 3, [RH, Score=119, Expect=6e-35]} {Smed: dd_Smed_v6_942_0_1, dd_Smed_v6_942_0_1, [RH, Score=136, Expect=6e-42]} {RNA1509_14336} {RNA1310_31435.1} {RNA815_13894.2} Mlig455_063775 {REF} {Length: 1522} {TRANSSPLICED} {Pfam: MAPEG family [PF01124.20, score=76.8]} {Human: ENSG00000143198, MGST3, microsomal glutathione S-transferase 3, [RH, Score=117, Expect=5e-34]} {Mouse: ENSMUSG00000026688, Mgst3, microsomal glutathione S-transferase 3, [RH, Score=119, Expect=6e-35]} {Smed: dd_Smed_v6_942_0_1, dd_Smed_v6_942_0_1, [RH, Score=136, Expect=6e-42]} {RNA1509_12579, RNA1509_14336} {RNA1310_31435.1, RNA1509_12579, RNA1509_14336} {RNA1509_12579, RNA1509_14336, RNA815_13894.2}
9.	MligTC455_09186	306	6.38	Mlig455_064896	Neo: - Age: -	PHKA1	0.958	-	-	-	0.958	-	-	Mlig455_064896 {REF} {Length: 5554} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 15 [PF00723.23, score=420.8]; Phosphorylase b kinase C-terminal domain [PF19292.1, score=91.0]} {Human: ENSG00000067177, PHKA1, phosphorylase kinase regulatory subunit alpha 1, [Score=959, Expect=0.0]} {Mouse: ENSMUSG00000034055, Phka1, phosphorylase kinase alpha 1, [Score=957, Expect=0.0]} {Dmel: FBgn0030087, CG7766, [RH, Score=1028, Expect=0.0]} {Celegans: WBGene00015754, C14B9.8, Probable phosphorylase b kinase regulatory subunit alpha, [RH, Score=826, Expect=0.0]} {Smed: dd_Smed_v6_6919_0_1, dd_Smed_v6_6919_0_1, [RH, Score=1063, Expect=0.0]} {RNA1509_11853} {RNA1310_2228.1, RNA1509_11853} {RNA1509_11853, RNA815_2765}
10.	MligTC455_24472	738	15.38	Mlig455_039540	Neo: - Age: Up-Down-Down	CSMD2	0.958	-	-	-	-	-	0.958	Mlig455_039540 {REF} {Length: 18394} {Pfam: Sushi repeat (SCR repeat) [PF00084.22, score=107.2]; CUB domain [PF00431.22, score=96.4]; Calcium-binding EGF domain [PF07645.17, score=47.4]; Complement Clr-like EGF-like [PF12662.9, score=23.2]; Coagulation Factor Xa inhibitory site [PF14670.8, score=22.1]} {Human: ENSG00000121904, CSMD2, CUB and Sushi multiple domains 2, [Score=103, Expect=8e-21]} {Mouse: ENSMUSG00000060924, Csmd1, CUB and Sushi multiple domains 1, [Score=97.1, Expect=5e-19]; ENSMUSG00000022311, Csmd3, CUB and Sushi multiple domains 3, [Score=95.5, Expect=2e-18]; ENSMUSG00000028804, Csmd2, CUB and Sushi multiple domains 2, [Score=93.6, Expect=6e-18]} {Dmel: FBgn0031879, uif, uninflatable, [Score=207, Expect=1e-52]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=210, Expect=1e-53]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=77.4, Expect=1e-13]} {RNA1509_104, RNA1509_1720} {RNA1310_11.1, RNA1509_104} {RNA1509_104, RNA815_7}
11.	MligTC455_42488	374	7.79	Mlig455_046417	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.582		0.955	-	-	0.955	-	-	-	Mlig455_046417 {REF} {Length: 2572} {Smed: dd_Smed_v6_12856_0_1, dd_Smed_v6_12856_0_1, [RH, Score=107, Expect=4e-27]} {RNA1509_33429, RNA1509_6433} {RNA1310_24046, RNA1509_33429} {RNA1509_33429, RNA815_8453}
12.	MligTC455_54002	39320	819.17	Mlig455_062577	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.908 Region-enriched R2: 1.076/0.02199	HPGDS	0.955	-	-	-	-	-	0.955	Mlig455_062577 {REF} {Length: 1344} {TRANSSPLICED} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=60.6]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=30.5]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=22.7]} {Human: ENSG00000163106, HPGDS, hematopoietic prostaglandin D synthase, [RH, Score=104, Expect=2e-27]} {Mouse: ENSMUSG00000029919, Hpgds, hematopoietic prostaglandin D synthase, [RH, Score=90.5, Expect=2e-22]} {Celegans: WBGene00001759, gst-11, Glutathione S-Transferase, [Score=98.2, Expect=1e-25]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [Score=176, Expect=4e-56]} {RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612} {RNA1310_24762, RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612} {RNA1509_1453, RNA1509_20209, RNA1509_21721, RNA1509_2315, RNA1509_2503, RNA1509_26173, RNA1509_28962, RNA1509_31321, RNA1509_52612, RNA815_10524}
13.	MligTC455_42163	1246	25.95	Mlig455_048416	Neo: Int S/G2/M Age: Down-Down-Up	DR1	0.953	-	-	0.953	-	-	-	Mlig455_048416 {REF} {Length: 1824} {TRANSSPLICED} {Pfam: Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=70.7]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=32.0]; CENP-W protein [PF15510.8, score=24.7]} {Human: ENSG00000117505, DR1, down-regulator of transcription 1, [RH, Score=132, Expect=7e-39]} {Mouse: ENSMUSG00000029265, Dr1, down-regulator of transcription 1, [RH, Score=132, Expect=5e-39]} {Dmel: FBgn0028926, NC2beta, Negative Cofactor 2beta, [RH, Score=127, Expect=6e-37]} {Celegans: WBGene00001092, dro-1, DR1 (One) transcription factor family, [RH, Score=90.1, Expect=1e-22]} {Smed: dd_Smed_v6_7479_0_1, dd_Smed_v6_7479_0_1, [RH, Score=125, Expect=2e-36]} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA1509_7108} {RNA1310_37108, RNA1509_14024, RNA1509_24840, RNA1509_26197} {RNA1509_14024, RNA1509_24840, RNA1509_26197, RNA815_17293}

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