TomoSeq data search

Data search

Results for MligTC455_19285

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19285

137

2.86

Mlig455_007425

Neo: -

Age: Up-Down-Up

Region-enriched R4: 4.379/0.00116

STX12

Mlig455_007425 {REF} {Length: 2090} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756} {RNA1310_6233} {RNA815_11207}

Cumulative graph for MligTC455_19285

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.25	2.437	0.99969	1.00000
RegionR2	0.72	2.437	0.51609	0.89198
RegionR3	1.208	2.437	0.26174	0.80546
RegionR4	4.379	2.437	0.00007	0.00116
RegionR5	1.42	2.437	0.17390	0.44555
RegionR6	0.762	2.437	0.47626	1.00000
RegionR7	0.697	2.437	0.54058	1.00000
RegionR8	-5.937	2.437	0.99985	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.038	2.437	0.99999	1.00000
RegenerationR2	-0.063	2.437	0.90421	1.00000
RegenerationR3	-0.347	2.437	0.62378	0.91770
RegenerationR4	-1.606	2.437	0.04928	0.35783
RegenerationR5	-0.298	2.437	0.65539	0.93412
RegenerationR6	0.427	2.437	0.58944	0.86315
RegenerationBL	1.369	2.437	0.42562	0.79374
RegenerationTP	0.953	2.437	0.62340	0.97413

Genes with expression patterns similar to MligTC455_19285

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19285	137	2.86	Mlig455_007425	Neo: - Age: Up-Down-Up Region-enriched R4: 4.379/0.00116	STX12	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007425 {REF} {Length: 2090} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756} {RNA1310_6233} {RNA815_11207}
2.	MligTC455_40502	75	1.57	Mlig455_011578	Neo: - Age: Down-Up-Down	SPATA18	1.738	-	-	0.972	0.766	-	-	Mlig455_011578 {REF} {Length: 2873} {TRANSSPLICED} {Pfam: Mitochondria-eating protein [PF16026.7, score=153.7]} {Human: ENSG00000163071, SPATA18, spermatogenesis associated 18, [Score=179, Expect=2e-48]} {Mouse: ENSMUSG00000029155, Spata18, spermatogenesis associated 18, [Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_6321_0_1, dd_Smed_v6_6321_0_1, [Score=344, Expect=3e-111]} {RNA1509_30652} {RNA1310_30604} {RNA815_17332}
3.	MligTC455_13794	122	2.54	Mlig455_007349	Neo: - Age: -		0.969	-	-	0.969	-	-	-	Mlig455_007349 {REF} {Length: 969} {RNA1509_18274, RNA1509_24366} {RNA1310_22608, RNA1509_18274} {RNA1509_18274, RNA815_25844}
4.	MligTC455_46033	374	7.79	Mlig455_047932	Neo: Irradiation Age: - Region-enriched R5: 1.002/0.04744		0.962	-	-	-	0.962	-	-	Mlig455_047932 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=49.0]} {RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1310_12378, RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1509_21516, RNA1509_43295, RNA1509_44776, RNA815_4225.1}
5.	MligTC455_33257	441	9.18	Mlig455_032762	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.898 Region-enriched R7: 7.302/0.00324	ADAMTS1	0.959	-	-	0.959	-	-	-	Mlig455_032762 {REF} {Length: 2204} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=49.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=41.2]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=41.1]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=35.5]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=29.0]; ADAM cysteine-rich domain [PF17771.3, score=25.4]} {Human: ENSG00000154734, ADAMTS1, ADAM metallopeptidase with thrombospondin type 1 motif 1, [Score=74.7, Expect=3e-13]; ENSG00000145808, ADAMTS19, ADAM metallopeptidase with thrombospondin type 1 motif 19, [Score=74.3, Expect=5e-13]} {Mouse: ENSMUSG00000006403, Adamts4, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4, [Score=70.5, Expect=5e-12]; ENSMUSG00000022893, Adamts1, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1, [Score=68.9, Expect=2e-11]; ENSMUSG00000031994, Adamts8, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 8, [Score=68.6, Expect=2e-11]; ENSMUSG00000053441, Adamts19, a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19, [Score=68.6, Expect=2e-11]} {Dmel: FBgn0034903, sona, sol narae, [Score=73.2, Expect=5e-13]} {Celegans: WBGene00003248, mig-17, ADAM family mig-17, [Score=57.0, Expect=3e-08]} {RNA1509_380} {RNA1310_14719} {RNA815_5216}
6.	MligTC455_54572	9	0.18	Mlig455_061495	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_061495 {REF} {Length: 1} {NoTransDecoderORF}
7.	MligTC455_17935	34	0.72	Mlig455_034763	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_034763 {REF} {Length: 821} {RNA1509_136} {RNA1310_10351.1} {RNA815_4820.1}
8.	MligTC455_17204	163	3.39	Mlig455_052035, Mlig455_057261	Neo: - Age: logFC(26M/2M)=0.633 Region-enriched R2: 3.666/0.00172		0.953	-	-	0.953	-	-	-	Mlig455_052035 {REF} {Length: 833} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_64963} {RNA815_45593} Mlig455_057261 {REF} {Length: 1330}

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