Data search
Results for MligTC455_46033
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46033 | 374 | 7.79 | Mlig455_047932 | Neo: Irradiation Age: - Region-enriched R5: 1.002/0.04744 |
Mlig455_047932 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=49.0]} {RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1310_12378, RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1509_21516, RNA1509_43295, RNA1509_44776, RNA815_4225.1} |
Cumulative graph for MligTC455_46033
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.719 | 3.481 | 0.21851 | 0.86063 | |
| RegionR2 | 0.382 | 3.481 | 0.53962 | 0.90850 | |
| RegionR3 | -0.837 | 3.481 | 0.10530 | 0.56752 | |
| RegionR4 | -0.364 | 3.481 | 0.58362 | 0.89964 | |
| RegionR5 | 1.002 | 3.481 | 0.00763 | 0.04744 | |
| RegionR6 | -0.075 | 3.481 | 0.87928 | 1.00000 | |
| RegionR7 | -1.459 | 3.481 | 0.11479 | 0.64195 | |
| RegionR8 | -0.367 | 3.481 | 0.72299 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.73 | 3.481 | 0.05957 | 0.72608 | |
| RegenerationR2 | 0.16 | 3.481 | 0.70128 | 0.95679 | |
| RegenerationR3 | 0.776 | 3.481 | 0.14969 | 0.57848 | |
| RegenerationR4 | 0.166 | 3.481 | 0.76663 | 0.97538 | |
| RegenerationR5 | -0.138 | 3.481 | 0.72946 | 0.96333 | |
| RegenerationR6 | 0.037 | 3.481 | 0.94696 | 1.00000 | |
| RegenerationBL | 1.261 | 3.481 | 0.06210 | 0.28937 | |
| RegenerationTP | -0.348 | 3.481 | 0.73854 | 1.00000 |
Genes with expression patterns similar to MligTC455_46033
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46033 | 374 | 7.79 | Mlig455_047932 | Neo: Irradiation Age: - Region-enriched R5: 1.002/0.04744 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047932 {REF} {Length: 2117} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=49.0]} {RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1310_12378, RNA1509_21516, RNA1509_43295, RNA1509_44776} {RNA1509_21516, RNA1509_43295, RNA1509_44776, RNA815_4225.1} | |
| 2. | MligTC455_28348 | 253 | 5.27 | Mlig455_062624 | Neo: - Age: - Region-enriched R4: 2.660/0.00291 |
1.71 | - | 0.756 | 0.954 | - | - | - | Mlig455_062624 {REF} {Length: 3425} {TRANSSPLICED} {RNA1509_26302} {RNA1310_7764} {RNA815_10526} | |
| 3. | MligTC455_48405 | 497 | 10.35 | Mlig455_031871 | Neo: Irradiation Age: - |
SMAD4 | 0.968 | 0.968 | - | - | - | - | - | Mlig455_031871 {REF} {Length: 2581} {Pfam: MH2 domain [PF03166.16, score=213.1]; MH1 domain [PF03165.18, score=73.4]} {Human: ENSG00000141646, SMAD4, SMAD family member 4, [Score=365, Expect=3e-121]} {Mouse: ENSMUSG00000024515, Smad4, SMAD family member 4, [Score=259, Expect=2e-79]} {Dmel: FBgn0011655, Med, Medea, [Score=260, Expect=9e-79]} {Celegans: WBGene00004858, sma-4, Dwarfin sma-4, [Score=241, Expect=1e-72]} {Smed: dd_Smed_v6_1923_0_1, dd_Smed_v6_1923_0_1, [Score=274, Expect=8e-85]} {RNA1509_42891} {RNA1310_16182} {RNA815_23821} |
| 4. | MligTC455_15351 | 595 | 12.4 | Mlig455_060173, Mlig455_067099 | Neo: - Age: Up-Down-Down |
0.963 | - | - | - | 0.963 | - | - | Mlig455_060173 {REF} {Length: 2925} {TRANSSPLICED} {RNA1509_37019} {RNA1310_14310.1} {RNA815_22734} Mlig455_067099 {REF} {Length: 3471} {TRANSSPLICED} {RNA1509_37019} {RNA1310_14310.1} {RNA815_22734} |
|
| 5. | MligTC455_19285 | 137 | 2.86 | Mlig455_007425 | Neo: - Age: Up-Down-Up Region-enriched R4: 4.379/0.00116 |
STX12 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_007425 {REF} {Length: 2090} {Pfam: Syntaxin-like protein [PF14523.8, score=58.2]; SNARE domain [PF05739.21, score=51.4]; Syntaxin [PF00804.27, score=26.9]} {Human: ENSG00000117758, STX12, syntaxin 12, [RH, Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000019998, Stx7, syntaxin 7, [RH, Score=130, Expect=3e-36]; ENSMUSG00000028879, Stx12, syntaxin 12, [RH, Score=126, Expect=1e-34]} {Dmel: FBgn0267849, Syx7, Syntaxin 7, [RH, Score=114, Expect=7e-30]} {Celegans: WBGene00009478, syx-7, SYntaXin, [RH, Score=104, Expect=9e-27]} {Smed: dd_Smed_v6_4152_0_1, dd_Smed_v6_4152_0_1, [RH, Score=91.3, Expect=6e-22]} {RNA1509_10756} {RNA1310_6233} {RNA815_11207} |
| 6. | MligTC455_30222 | 149 | 3.11 | Mlig455_018205 | Neo: - Age: Up-Down-Down |
0.96 | - | - | 0.960 | - | - | - | Mlig455_018205 {REF} {Length: 8026} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=174.6]; PIF1-like helicase [PF05970.16, score=58.2]; AAA domain [PF13604.8, score=24.0]} {Celegans: WBGene00019136, F59H6.5, [Score=569, Expect=2e-178]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=70.9, Expect=3e-14]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} | |
| 7. | MligTC455_49760 | 537 | 11.2 | Mlig455_039884, Mlig455_039902, Mlig455_039935 | Neo: - Age: Down-Up-Down |
ZDHHC3 | 0.958 | - | - | - | - | 0.958 | - | Mlig455_039884 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.0]} {Human: ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=241, Expect=8e-78]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=238, Expect=2e-76]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=243, Expect=2e-78]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=238, Expect=1e-76]} {Dmel: FBgn0034057, CG8314, [Score=232, Expect=1e-74]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=192, Expect=2e-59]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=261, Expect=4e-85]} {RNA1509_20329, RNA1509_26945} {RNA1310_6664, RNA1509_20329} {RNA1509_20329, RNA815_1015.1} Mlig455_039902 {REF} {Length: 1753} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=125.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=211, Expect=6e-66]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=211, Expect=2e-66]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=205, Expect=1e-63]} {Dmel: FBgn0034057, CG8314, [Score=199, Expect=8e-62]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=168, Expect=2e-50]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=234, Expect=9e-75]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1} Mlig455_039935 {REF} {Length: 2806} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=66.1]} {Human: ENSG00000280674, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000163812, ZDHHC3, zinc finger DHHC-type containing 3, [Score=125, Expect=2e-31]; ENSG00000153786, ZDHHC7, zinc finger DHHC-type containing 7, [Score=124, Expect=3e-31]} {Mouse: ENSMUSG00000025786, Zdhhc3, zinc finger, DHHC domain containing 3, [Score=125, Expect=6e-32]; ENSMUSG00000031823, Zdhhc7, zinc finger, DHHC domain containing 7, [Score=124, Expect=4e-31]} {Dmel: FBgn0034057, CG8314, [Score=124, Expect=1e-31]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=108, Expect=1e-26]} {Smed: dd_Smed_v6_4085_0_1, dd_Smed_v6_4085_0_1, [Score=160, Expect=4e-44]} {RNA1509_26945} {RNA1310_6664} {RNA815_1015.1} |
| 8. | MligTC455_38704 | 289 | 6.03 | Mlig455_058635 | Neo: - Age: - |
PSMC1 | 0.955 | - | 0.955 | - | - | - | - | Mlig455_058635 {REF} {Length: 2118} {TRANSSPLICED} {Pfam: Conserved hypothetical ATP binding protein [PF03029.19, score=200.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=141.5]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=40.0]; AAA domain (Cdc48 subfamily) [PF07724.16, score=26.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=24.3]; AAA+ lid domain [PF17862.3, score=23.7]; Protein of unknown function (DUF815) [PF05673.15, score=23.5]; AAA domain [PF13401.8, score=23.5]; AAA domain [PF13238.8, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=22.0]; Ferrous iron transport protein B [PF02421.20, score=20.8]; AAA ATPase domain [PF13191.8, score=20.2]} {Human: ENSG00000100764, PSMC1, proteasome 26S subunit, ATPase 1, [Score=561, Expect=0.0]} {Mouse: ENSMUSG00000021178, Psmc1, protease (prosome, macropain) 26S subunit, ATPase 1, [Score=561, Expect=0.0]} {Dmel: FBgn0015282, Rpt2, Regulatory particle triple-A ATPase 2, [Score=568, Expect=0.0]} {Celegans: WBGene00004502, rpt-2, Probable 26S protease regulatory subunit 4, [Score=549, Expect=0.0]} {Smed: dd_Smed_v6_1222_0_1, dd_Smed_v6_1222_0_1, [Score=574, Expect=0.0]} {RNA1509_1201} {RNA1310_10914} {RNA815_3274.2} |
| 9. | MligTC455_33224 | 583 | 12.14 | Mlig455_062467 | Neo: - Age: - |
PTPRR | 0.954 | - | - | - | - | - | 0.954 | Mlig455_062467 {REF} {Length: 2901} {TRANSSPLICED} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=215.2]; Tyrosine phosphatase family [PF13350.8, score=20.4]; Adenovirus E3 region protein CR2 [PF02439.17, score=18.4]} {Human: ENSG00000153233, PTPRR, protein tyrosine phosphatase, receptor type R, [RH, Score=233, Expect=4e-71]} {Mouse: ENSMUSG00000020151, Ptprr, protein tyrosine phosphatase, receptor type, R, [RH, Score=230, Expect=2e-69]} {Dmel: FBgn0004369, Ptp99A, Protein tyrosine phosphatase 99A, [Score=151, Expect=4e-39]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=152, Expect=1e-39]} {Smed: dd_Smed_v6_8755_0_1, dd_Smed_v6_8755_0_1, [RH, Score=253, Expect=2e-78]} {RNA1509_58461} {RNA1310_7060.2} {RNA815_5407.1} |
| 10. | MligTC455_18356 | 231 | 4.81 | Mlig455_026237 | Neo: - Age: - |
NWD2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_026237 {REF} {Length: 6960} {TRANSSPLICED} {Pfam: NACHT domain [PF05729.14, score=36.9]; Domain of unknown function (DUF4062) [PF13271.8, score=21.0]; AAA domain [PF13401.8, score=19.0]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=281, Expect=1e-75]; ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=268, Expect=5e-72]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=289, Expect=4e-78]} {Dmel: FBgn0038397, CG10185, [Score=432, Expect=5e-124]} {Celegans: WBGene00020254, T05C3.2, [Score=388, Expect=2e-109]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=230, Expect=2e-60]} {RNA1509_48979} {RNA1310_12147} {RNA815_29824} |