TomoSeq data search

Data search

Results for MligTC455_19459

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_19459	537	11.19	Mlig455_007621	Neo: - Age: Down-Up-Down		Mlig455_007621 {REF} {Length: 2493} {RNA1509_22132, RNA1509_3144} {RNA1310_8535.1, RNA1509_22132} {RNA1509_22132, RNA815_3484.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_19459

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.556	3.855	0.42294	1.00000
RegionR2	-0.866	3.855	0.33405	0.72559
RegionR3	0.423	3.855	0.54401	1.00000
RegionR4	0.585	3.855	0.45948	0.78758
RegionR5	0.573	3.855	0.36921	0.72181
RegionR6	0.131	3.855	0.84506	1.00000
RegionR7	0.531	3.855	0.47220	1.00000
RegionR8	0.18	3.855	0.84754	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.53	3.855	0.53999	1.00000
RegenerationR2	0.783	3.855	0.29958	0.74140
RegenerationR3	0.057	3.855	0.94345	1.00000
RegenerationR4	0.403	3.855	0.60935	0.91703
RegenerationR5	0.528	3.855	0.48719	0.85093
RegenerationR6	0.204	3.855	0.80040	0.97730
RegenerationBL	-0.888	3.855	0.32834	0.69467
RegenerationTP	0.397	3.855	0.64462	0.98583

Genes with expression patterns similar to MligTC455_19459

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19459	537	11.19	Mlig455_007621	Neo: - Age: Down-Up-Down		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007621 {REF} {Length: 2493} {RNA1509_22132, RNA1509_3144} {RNA1310_8535.1, RNA1509_22132} {RNA1509_22132, RNA815_3484.1}
2.	MligTC455_27610	370	7.71	Mlig455_022082, Mlig455_066623	Neo: - Age: Down-Down-Up Region-enriched R5: 1.161/0.03987	HIST1H2BK	1.712	-	-	-	0.950	-	0.762	Mlig455_022082 {REF} {Length: 491} {NoTransDecoderORF} {RNA1310_39046} {RNA815_41302} Mlig455_066623 {REF} {Length: 2228} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=83.5]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=29.7]; YscO-like protein [PF16789.7, score=19.2]} {Human: ENSG00000197903, HIST1H2BK, histone cluster 1 H2B family member k, [RH, Score=197, Expect=6e-66]; ENSG00000276410, HIST1H2BB, histone cluster 1 H2B family member b, [RH, Score=197, Expect=1e-65]; ENSG00000124635, HIST1H2BJ, histone cluster 1 H2B family member j, [RH, Score=197, Expect=4e-66]; ENSG00000274641, HIST1H2BO, histone cluster 1 H2B family member o, [RH, Score=196, Expect=1e-65]; ENSG00000158373, HIST1H2BD, histone cluster 1 H2B family member d, [RH, Score=196, Expect=2e-65]; ENSG00000233822, HIST1H2BN, histone cluster 1 H2B family member n, [RH, Score=196, Expect=2e-65]; ENSG00000277224, HIST1H2BF, histone cluster 1 H2B family member f, [RH, Score=196, Expect=2e-65]; ENSG00000274290, HIST1H2BE, histone cluster 1 H2B family member e, [RH, Score=196, Expect=2e-65]; ENSG00000184678, HIST2H2BE, histone cluster 2 H2B family member e, [RH, Score=196, Expect=1e-65]; ENSG00000275713, HIST1H2BH, histone cluster 1 H2B family member h, [RH, Score=196, Expect=2e-65]; ENSG00000273802, HIST1H2BG, histone cluster 1 H2B family member g, [RH, Score=196, Expect=2e-65]; ENSG00000278588, HIST1H2BI, histone cluster 1 H2B family member i, [RH, Score=196, Expect=2e-65]; ENSG00000180596, HIST1H2BC, histone cluster 1 H2B family member c, [RH, Score=196, Expect=2e-65]; ENSG00000273703, HIST1H2BM, histone cluster 1 H2B family member m, [RH, Score=195, Expect=5e-65]; ENSG00000234289, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000274559, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000203814, HIST2H2BF, histone cluster 2 H2B family member f, [RH, Score=194, Expect=1e-64]; ENSG00000185130, HIST1H2BL, histone cluster 1 H2B family member l, [RH, Score=192, Expect=5e-64]; ENSG00000146047, HIST1H2BA, histone cluster 1 H2B family member a, [RH, Score=190, Expect=5e-63]} {Mouse: ENSMUSG00000058385, Hist1h2bg, histone cluster 1, H2bg, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114279, Hist1h2bm, histone cluster 1, H2bm, [RH, Score=196, Expect=1e-65]; ENSMUSG00000047246, Hist1h2be, histone cluster 1, H2be, [RH, Score=196, Expect=1e-65]; ENSMUSG00000018102, Hist1h2bc, histone cluster 1, H2bc, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114456, Hist1h2bh, histone cluster 1, H2bh, [RH, Score=196, Expect=1e-65]; ENSMUSG00000062727, Hist1h2bk, histone cluster 1, H2bk, [RH, Score=194, Expect=6e-65]; ENSMUSG00000105827, Hist2h2bb, histone cluster 2, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000075031, Hist1h2bb, histone cluster 1, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000095217, Hist1h2bn, histone cluster 1, H2bn, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069268, Hist1h2bf, histone cluster 1, H2bf, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069303, Hist1h2br, histone cluster 1 H2br, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069300, Hist1h2bj, histone cluster 1, H2bj, [RH, Score=193, Expect=2e-64]; ENSMUSG00000094338, Hist1h2bl, histone cluster 1, H2bl, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069307, Hist1h2bq, histone cluster 1, H2bq, [RH, Score=193, Expect=2e-64]; ENSMUSG00000068854, Hist2h2be, histone cluster 2, H2be, [RH, Score=192, Expect=3e-64]; ENSMUSG00000069308, Hist1h2bp, histone cluster 1, H2bp, [RH, Score=192, Expect=5e-64]; ENSMUSG00000050799, Hist1h2ba, histone cluster 1, H2ba, [RH, Score=189, Expect=4e-63]} {Dmel: FBgn0061209, His2B:CG17949, [RH, Score=178, Expect=1e-58]} {Celegans: WBGene00001915, his-41, Probable histone H2B 3, [RH, Score=188, Expect=1e-62]} {Smed: dd_Smed_v6_879_0_1, dd_Smed_v6_879_0_1, [RH, Score=197, Expect=2e-66]} {RNA1509_28769} {RNA1310_21486.1, RNA1509_28769} {RNA1509_28769, RNA815_22759.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_19459

537

11.19

Mlig455_007621

Neo: -

Age: Down-Up-Down

1.000

Mlig455_007621 {REF} {Length: 2493} {RNA1509_22132, RNA1509_3144} {RNA1310_8535.1, RNA1509_22132} {RNA1509_22132, RNA815_3484.1}

MligTC455_27610

370

7.71

Mlig455_022082, Mlig455_066623

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.161/0.03987

HIST1H2BK

1.712

0.950

0.762

Mlig455_022082 {REF} {Length: 491} {NoTransDecoderORF} {RNA1310_39046} {RNA815_41302}

Mlig455_066623 {REF} {Length: 2228} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=83.5]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=29.7]; YscO-like protein [PF16789.7, score=19.2]} {Human: ENSG00000197903, HIST1H2BK, histone cluster 1 H2B family member k, [RH, Score=197, Expect=6e-66]; ENSG00000276410, HIST1H2BB, histone cluster 1 H2B family member b, [RH, Score=197, Expect=1e-65]; ENSG00000124635, HIST1H2BJ, histone cluster 1 H2B family member j, [RH, Score=197, Expect=4e-66]; ENSG00000274641, HIST1H2BO, histone cluster 1 H2B family member o, [RH, Score=196, Expect=1e-65]; ENSG00000158373, HIST1H2BD, histone cluster 1 H2B family member d, [RH, Score=196, Expect=2e-65]; ENSG00000233822, HIST1H2BN, histone cluster 1 H2B family member n, [RH, Score=196, Expect=2e-65]; ENSG00000277224, HIST1H2BF, histone cluster 1 H2B family member f, [RH, Score=196, Expect=2e-65]; ENSG00000274290, HIST1H2BE, histone cluster 1 H2B family member e, [RH, Score=196, Expect=2e-65]; ENSG00000184678, HIST2H2BE, histone cluster 2 H2B family member e, [RH, Score=196, Expect=1e-65]; ENSG00000275713, HIST1H2BH, histone cluster 1 H2B family member h, [RH, Score=196, Expect=2e-65]; ENSG00000273802, HIST1H2BG, histone cluster 1 H2B family member g, [RH, Score=196, Expect=2e-65]; ENSG00000278588, HIST1H2BI, histone cluster 1 H2B family member i, [RH, Score=196, Expect=2e-65]; ENSG00000180596, HIST1H2BC, histone cluster 1 H2B family member c, [RH, Score=196, Expect=2e-65]; ENSG00000273703, HIST1H2BM, histone cluster 1 H2B family member m, [RH, Score=195, Expect=5e-65]; ENSG00000234289, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000274559, H2BFS, H2B histone family member S, [RH, Score=194, Expect=1e-64]; ENSG00000203814, HIST2H2BF, histone cluster 2 H2B family member f, [RH, Score=194, Expect=1e-64]; ENSG00000185130, HIST1H2BL, histone cluster 1 H2B family member l, [RH, Score=192, Expect=5e-64]; ENSG00000146047, HIST1H2BA, histone cluster 1 H2B family member a, [RH, Score=190, Expect=5e-63]} {Mouse: ENSMUSG00000058385, Hist1h2bg, histone cluster 1, H2bg, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114279, Hist1h2bm, histone cluster 1, H2bm, [RH, Score=196, Expect=1e-65]; ENSMUSG00000047246, Hist1h2be, histone cluster 1, H2be, [RH, Score=196, Expect=1e-65]; ENSMUSG00000018102, Hist1h2bc, histone cluster 1, H2bc, [RH, Score=196, Expect=1e-65]; ENSMUSG00000114456, Hist1h2bh, histone cluster 1, H2bh, [RH, Score=196, Expect=1e-65]; ENSMUSG00000062727, Hist1h2bk, histone cluster 1, H2bk, [RH, Score=194, Expect=6e-65]; ENSMUSG00000105827, Hist2h2bb, histone cluster 2, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000075031, Hist1h2bb, histone cluster 1, H2bb, [RH, Score=194, Expect=8e-65]; ENSMUSG00000095217, Hist1h2bn, histone cluster 1, H2bn, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069268, Hist1h2bf, histone cluster 1, H2bf, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069303, Hist1h2br, histone cluster 1 H2br, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069300, Hist1h2bj, histone cluster 1, H2bj, [RH, Score=193, Expect=2e-64]; ENSMUSG00000094338, Hist1h2bl, histone cluster 1, H2bl, [RH, Score=193, Expect=2e-64]; ENSMUSG00000069307, Hist1h2bq, histone cluster 1, H2bq, [RH, Score=193, Expect=2e-64]; ENSMUSG00000068854, Hist2h2be, histone cluster 2, H2be, [RH, Score=192, Expect=3e-64]; ENSMUSG00000069308, Hist1h2bp, histone cluster 1, H2bp, [RH, Score=192, Expect=5e-64]; ENSMUSG00000050799, Hist1h2ba, histone cluster 1, H2ba, [RH, Score=189, Expect=4e-63]} {Dmel: FBgn0061209, His2B:CG17949, [RH, Score=178, Expect=1e-58]} {Celegans: WBGene00001915, his-41, Probable histone H2B 3, [RH, Score=188, Expect=1e-62]} {Smed: dd_Smed_v6_879_0_1, dd_Smed_v6_879_0_1, [RH, Score=197, Expect=2e-66]} {RNA1509_28769} {RNA1310_21486.1, RNA1509_28769} {RNA1509_28769, RNA815_22759.2}