TomoSeq data search

Data search

Results for MligTC455_19462

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19462

23

0.48

Mlig455_020950

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.385

ATP6AP2

Mlig455_020950 {REF} {Length: 1681} {Pfam: Renin receptor-like protein [PF07850.16, score=80.3]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.6, Expect=3e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=67.0, Expect=3e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=55.1, Expect=2e-08]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.4, Expect=3e-18]} {RNA1509_6698} {RNA1310_8535.3} {RNA815_3484.1}

Cumulative graph for MligTC455_19462

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.04	0.892	0.99985	1.00000
RegionR2	-0.162	0.892	0.99955	1.00000
RegionR3	-2.77	0.892	0.99968	1.00000
RegionR4	1.792	0.892	0.27610	0.58280
RegionR5	0.252	0.892	0.67664	1.00000
RegionR6	0.072	0.892	0.63084	1.00000
RegionR7	-0.553	0.892	0.99962	1.00000
RegionR8	-0.67	0.892	0.99958	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.238	0.892	0.99992	1.00000
RegenerationR2	4.28	0.892	0.00137	0.05550
RegenerationR3	4.267	0.892	0.03992	0.35121
RegenerationR4	0.822	0.892	0.56344	0.89849
RegenerationR5	1.481	0.892	0.18523	0.61553
RegenerationR6	2.618	0.892	0.08819	0.37097
RegenerationBL	1.165	0.892	0.49203	0.85707
RegenerationTP	3.266	0.892	0.25666	0.70430

Genes with expression patterns similar to MligTC455_19462

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19462	23	0.48	Mlig455_020950	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.385	ATP6AP2	2	-	-	-	-	1.000	1.000	Mlig455_020950 {REF} {Length: 1681} {Pfam: Renin receptor-like protein [PF07850.16, score=80.3]} {Human: ENSG00000182220, ATP6AP2, ATPase H+ transporting accessory protein 2, [RH, Score=73.2, Expect=3e-14]} {Mouse: ENSMUSG00000031007, Atp6ap2, ATPase, H+ transporting, lysosomal accessory protein 2, [RH, Score=73.6, Expect=3e-14]} {Dmel: FBgn0037671, VhaM8.9, Vacuolar H[+] ATPase M8.9 accessory subunit, [RH, Score=67.0, Expect=3e-12]} {Celegans: WBGene00010993, vha-20, Vacuolar H ATPase, [RH, Score=55.1, Expect=2e-08]} {Smed: dd_Smed_v6_1067_0_1, dd_Smed_v6_1067_0_1, [RH, Score=77.4, Expect=3e-18]} {RNA1509_6698} {RNA1310_8535.3} {RNA815_3484.1}
2.	MligTC455_30025	384	8	Mlig455_008626, Mlig455_030299	Neo: - Age: -	RAP1B	1.709	-	-	-	-	0.951	0.758	Mlig455_008626 {REF} {Length: 2744} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=196.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.9]; ADP-ribosylation factor family [PF00025.23, score=35.7]; RsgA GTPase [PF03193.18, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.2]; 50S ribosome-binding GTPase [PF01926.25, score=19.0]} {Human: ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=302, Expect=7e-106]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=292, Expect=5e-102]} {Mouse: ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=302, Expect=4e-106]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=292, Expect=4e-102]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [RH, Score=284, Expect=5e-99]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [Score=294, Expect=5e-103]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [RH, Score=296, Expect=4e-104]} {RNA1509_27498} {RNA1310_19770} {RNA815_9807.1} Mlig455_030299 {REF} {Length: 2773} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=196.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.9]; ADP-ribosylation factor family [PF00025.23, score=35.3]; RsgA GTPase [PF03193.18, score=23.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=20.3]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000127314, RAP1B, RAP1B, member of RAS oncogene family, [Score=300, Expect=5e-105]; ENSG00000116473, RAP1A, RAP1A, member of RAS oncogene family, [Score=292, Expect=5e-102]} {Mouse: ENSMUSG00000052681, Rap1b, RAS related protein 1b, [Score=300, Expect=3e-105]; ENSMUSG00000068798, Rap1a, RAS-related protein 1a, [Score=292, Expect=3e-102]} {Dmel: FBgn0004636, Rap1, Rap1 GTPase, [RH, Score=284, Expect=5e-99]} {Celegans: WBGene00004307, rap-1, Ras-related protein Rap-1, [RH, Score=297, Expect=2e-104]} {Smed: dd_Smed_v6_1239_0_1, dd_Smed_v6_1239_0_1, [RH, Score=296, Expect=5e-104]} {RNA1509_27498} {RNA1310_19770, RNA1509_27498} {RNA1509_27498, RNA815_9807.1}
3.	MligTC455_36882	118	2.45	Mlig455_040028	Neo: Int S/G2/M Age: -		0.953	-	-	-	-	0.953	-	Mlig455_040028 {REF} {Length: 3355} {RNA1509_39805} {RNA1310_24031, RNA1509_39805} {RNA1509_39805, RNA815_10951.1}
4.	MligTC455_34965	67	1.4	Mlig455_061836	Neo: - Age: - Region-enriched R4: 5.310/0.00088 Region-enriched R5: 4.506/0.00012	TRMU	0.95	-	-	-	-	0.950	-	Mlig455_061836 {REF} {Length: 1305} {TRANSSPLICED} {Pfam: tRNA methyl transferase [PF03054.18, score=391.7]; Thiamine biosynthesis protein (ThiI) [PF02568.16, score=31.9]; Asparagine synthase [PF00733.23, score=20.9]; NAD synthase [PF02540.19, score=18.0]} {Human: ENSG00000100416, TRMU, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [RH, Score=332, Expect=1e-110]} {Mouse: ENSMUSG00000022386, Trmu, tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase, [RH, Score=332, Expect=4e-111]} {Dmel: FBgn0040337, CG3021, [RH, Score=348, Expect=9e-118]} {Celegans: WBGene00007114, mttu-1, Probable mitochondrial tRNA-specific 2-thiouridylase 1, [RH, Score=297, Expect=3e-98]} {Smed: dd_Smed_v6_12984_0_1, dd_Smed_v6_12984_0_1, [RH, Score=357, Expect=2e-121]} {RNA1509_13037} {RNA1310_15709.1} {RNA815_7452}

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