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Results for MligTC455_19471

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19471 275 5.72 Mlig455_017303

Neo: Irradiation

Age: Up-Down-Down

 MINDY4B Mlig455_017303 {REF} {Length: 3286} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=274.1]} {Human: ENSG00000214237, MINDY4B, MINDY family member 4B, [RH, Score=163, Expect=8e-44]} {Mouse: ENSMUSG00000101860, Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, [RH, Score=162, Expect=9e-44]; ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [RH, Score=159, Expect=5e-41]} {Dmel: FBgn0036143, CG14142, [RH, Score=148, Expect=6e-39]} {Smed: dd_Smed_v6_14822_0_1, dd_Smed_v6_14822_0_1, [RH, Score=260, Expect=3e-80]} {RNA1509_15560} {RNA1310_7214.1} {RNA815_22013}

Cumulative graph for MligTC455_19471

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.857 3.004 0.58975 1.00000
RegionR2 1.105 3.004 0.07398 0.33219
RegionR3 0.264 3.004 0.59092 1.00000
RegionR4 0.573 3.004 0.31512 0.63093
RegionR5 0.352 3.004 0.42131 0.78136
RegionR6 0.726 3.004 0.13989 0.67232
RegionR7 -1.13 3.004 0.17351 0.76484
RegionR8 -1.033 3.004 0.29608 0.92536

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.038 3.004 0.25365 0.96741
RegenerationR2 -0.186 3.004 0.67647 0.94775
RegenerationR3 -0.137 3.004 0.79512 0.98052
RegenerationR4 -0.802 3.004 0.14860 0.57592
RegenerationR5 0.017 3.004 0.96953 1.00000
RegenerationR6 -1.26 3.004 0.03614 0.23785
RegenerationBL -1.804 3.004 0.14977 0.46240
RegenerationTP -0.335 3.004 0.75253 1.00000


Genes with expression patterns similar to MligTC455_19471

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19471 275 5.72 Mlig455_017303

Neo: Irradiation

Age: Up-Down-Down

 MINDY4B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017303 {REF} {Length: 3286} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=274.1]} {Human: ENSG00000214237, MINDY4B, MINDY family member 4B, [RH, Score=163, Expect=8e-44]} {Mouse: ENSMUSG00000101860, Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, [RH, Score=162, Expect=9e-44]; ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [RH, Score=159, Expect=5e-41]} {Dmel: FBgn0036143, CG14142, [RH, Score=148, Expect=6e-39]} {Smed: dd_Smed_v6_14822_0_1, dd_Smed_v6_14822_0_1, [RH, Score=260, Expect=3e-80]} {RNA1509_15560} {RNA1310_7214.1} {RNA815_22013}
2. MligTC455_17684 157 3.26 Mlig455_041455

Neo: Irradiation

Age: Up-Down-Down

 ASPG 2.468 0.767 - - - 0.953 0.748 Mlig455_041455 {REF} {Length: 5938} {TRANSSPLICED} {Pfam: Asparaginase, N-terminal [PF00710.22, score=202.1]; Glutaminase/Asparaginase C-terminal domain [PF17763.3, score=84.6]; Ankyrin repeats (many copies) [PF13857.8, score=64.3]; Ankyrin repeats (3 copies) [PF12796.9, score=59.0]; Ankyrin repeats (many copies) [PF13637.8, score=54.0]; Ankyrin repeat [PF13606.8, score=43.8]; Ankyrin repeat [PF00023.32, score=35.8]} {Human: ENSG00000166183, ASPG, asparaginase, [Score=346, Expect=7e-110]} {Mouse: ENSMUSG00000037686, Aspg, asparaginase, [Score=340, Expect=9e-108]} {Dmel: FBgn0029689, CG6428, [RH, Score=439, Expect=2e-145]} {Celegans: WBGene00007756, C27A7.5, [Score=412, Expect=1e-134]} {Smed: dd_Smed_v6_7816_0_1, dd_Smed_v6_7816_0_1, [RH, Score=426, Expect=7e-140]} {RNA1509_11582, RNA1509_16816, RNA1509_8667} {RNA1310_8678, RNA1509_16816, RNA1509_8667} {RNA1509_16816, RNA1509_8667, RNA815_6302}
3. MligTC455_45523 528 11 Mlig455_063535

Neo: -

Age: Up-Down-Down

 DCAF6 1.761 - - - 0.798 0.963 - Mlig455_063535 {REF} {Length: 3252} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.9]} {Human: ENSG00000143164, DCAF6, DDB1 and CUL4 associated factor 6, [RH, Score=174, Expect=2e-45]} {Mouse: ENSMUSG00000026571, Dcaf6, DDB1 and CUL4 associated factor 6, [RH, Score=177, Expect=1e-46]} {Dmel: FBgn0000057, adp, adipose, [Score=105, Expect=1e-23]} {Celegans: WBGene00044440, adpr-1, ADiPose (Drosophila obesity gene) Related, [Score=77.4, Expect=1e-14]} {Smed: dd_Smed_v6_5540_0_1, dd_Smed_v6_5540_0_1, [Score=110, Expect=4e-25]} {RNA1509_11637} {RNA1310_10014.2} {RNA815_7894.1}
4. MligTC455_32796 106 2.21 Mlig455_059824

Neo: Int S/G2/M

Age: -

 1.688 - - - - 0.966 0.722 Mlig455_059824 {REF} {Length: 1634} {TRANSSPLICED} {RNA1509_48912} {RNA1310_29994} {RNA815_2705}
5. MligTC455_21555 70 1.46 Mlig455_014351

Neo: -

Age: -

 1.677 0.721 - - - 0.956 - Mlig455_014351 {REF} {Length: 4507} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=69.9]} {RNA1509_41009} {RNA1310_68932} {RNA815_36459}
6. MligTC455_22910 103 2.14 Mlig455_040130

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.273

 TMEM214 1.672 - - - - 0.954 0.718 Mlig455_040130 {REF} {Length: 3719} {Pfam: TMEM214, C-terminal, caspase 4 activator [PF10151.11, score=88.6]} {Human: ENSG00000119777, TMEM214, transmembrane protein 214, [RH, Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000038828, Tmem214, transmembrane protein 214, [RH, Score=61.2, Expect=3e-09]} {RNA1509_7642} {RNA1310_10501} {RNA815_16505}
7. MligTC455_25259 108 2.26 Mlig455_016987

Neo: -

Age: -

 TMEM30B 0.971 - - - - 0.971 - Mlig455_016987 {REF} {Length: 2255} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=285.6]} {Human: ENSG00000182107, TMEM30B, transmembrane protein 30B, [RH, Score=261, Expect=4e-83]} {Mouse: ENSMUSG00000034435, Tmem30b, transmembrane protein 30B, [RH, Score=253, Expect=2e-80]; ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=242, Expect=7e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=307, Expect=2e-101]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [RH, Score=287, Expect=9e-94]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=293, Expect=2e-96]} {RNA1509_30971} {RNA1310_19947, RNA1509_30971} {RNA1509_30971, RNA815_8261.1}
8. MligTC455_44323 393 8.19 Mlig455_065375

Neo: -

Age: -

 UPF3A 0.967 - - - - 0.967 - Mlig455_065375 {REF} {Length: 2017} {TRANSSPLICED} {Pfam: Smg-4/UPF3 family [PF03467.17, score=133.0]} {Human: ENSG00000169062, UPF3A, UPF3A, regulator of nonsense mediated mRNA decay, [RH, Score=107, Expect=1e-24]; ENSG00000125351, UPF3B, UPF3B, regulator of nonsense mediated mRNA decay, [RH, Score=105, Expect=3e-24]} {Mouse: ENSMUSG00000036572, Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), [RH, Score=107, Expect=4e-25]} {Dmel: FBgn0034923, Upf3, [RH, Score=114, Expect=2e-27]} {Celegans: WBGene00004882, smg-4, Suppressor with Morphological effect on Genitalia, [RH, Score=74.7, Expect=2e-14]} {RNA1509_14867, RNA1509_20383} {RNA1310_13461, RNA1509_14867, RNA1509_20383} {RNA1509_14867, RNA1509_20383, RNA815_1079.1}
9. MligTC455_09154 166 3.46 Mlig455_030876

Neo: -

Age: Down-Up-Down

 CDKL2 0.963 - - - 0.963 - - Mlig455_030876 {REF} {Length: 3190} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000138769, CDKL2, cyclin dependent kinase like 2, [RH, Score=454, Expect=1e-153]} {Mouse: ENSMUSG00000029403, Cdkl2, cyclin-dependent kinase-like 2 (CDC2-related kinase), [RH, Score=434, Expect=5e-146]} {Dmel: FBgn0031730, CG7236, [Score=346, Expect=8e-114]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [Score=344, Expect=4e-114]} {Smed: dd_Smed_v6_17162_0_1, dd_Smed_v6_17162_0_1, [RH, Score=409, Expect=2e-139]} {RNA1509_33670} {RNA1310_7234} {RNA815_1594}
10. MligTC455_38750 153 3.18 Mlig455_056235

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.901/0.01538

 AP3M1 0.953 - - - - 0.953 - Mlig455_056235 {REF} {Length: 4840} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=210.2]; Clathrin adaptor complex small chain [PF01217.22, score=28.7]} {Human: ENSG00000185009, AP3M1, adaptor related protein complex 3 subunit mu 1, [Score=517, Expect=0.0]} {Mouse: ENSMUSG00000021824, Ap3m1, adaptor-related protein complex 3, mu 1 subunit, [RH, Score=516, Expect=0.0]} {Dmel: FBgn0000330, cm, carmine, [Score=483, Expect=3e-170]} {Celegans: WBGene00000164, apm-3, AdaPtin, Mu/medium chain (Clathrin associated complex), [RH, Score=461, Expect=1e-161]} {Smed: dd_Smed_v6_6368_0_1, dd_Smed_v6_6368_0_1, [Score=441, Expect=9e-154]} {RNA1509_42193} {RNA1310_18368} {RNA815_13395}
11. MligTC455_53175 150 3.12 Mlig455_024313, Mlig455_024369

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_024313 {REF} {Length: 800} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981}

Mlig455_024369 {REF} {Length: 562} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=59.2]} {Dmel: FBgn0013467, igl, igloo, [Score=66.6, Expect=6e-12]} {Smed: dd_Smed_v6_4783_0_67, dd_Smed_v6_4783_0_67, [Score=75.1, Expect=3e-14]} {RNA1310_37981}
12. MligTC455_20354 66 1.38 Mlig455_043446

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_043446 {REF} {Length: 2134} {NoTransDecoderORF} {RNA1509_49770} {RNA1310_75709} {RNA815_12664}
13. MligTC455_33194 52 1.09 Mlig455_000056

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_000056 {REF} {Length: 1011} {TRANSSPLICED} {Celegans: WBGene00013989, ZK512.11, [Score=47.0, Expect=2e-08]} {RNA1509_37390} {RNA1310_59086} {RNA815_33587}
14. MligTC455_20418 213 4.45 Mlig455_003920

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_003920 {REF} {Length: 3500} {Pfam: Ring finger domain [PF13639.8, score=19.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=18.9]} {RNA1509_20350, RNA1509_23231} {RNA1310_6875, RNA1509_20350, RNA1509_23231} {RNA1509_20350, RNA1509_23231, RNA815_2399.1}
15. MligTC455_23162 1050 21.88 Mlig455_037883, Mlig455_039045

Neo: -

Age: logFC(26M/2M)=-0.251

 CFAP221 0.95 - - - - 0.950 -

Mlig455_037883 {REF} {Length: 4007} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.3]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=403, Expect=4e-126]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=389, Expect=9e-121]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=250, Expect=1e-71]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138}

Mlig455_039045 {REF} {Length: 3771} {TRANSSPLICED} {Pfam: Flagellar-associated PapD-like [PF14874.8, score=32.4]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=20.3]} {Human: ENSG00000163075, CFAP221, cilia and flagella associated protein 221, [RH, Score=401, Expect=2e-125]} {Mouse: ENSMUSG00000036962, Cfap221, cilia and flagella associated protein 221, [RH, Score=387, Expect=2e-120]} {Smed: dd_Smed_v6_12752_0_1, dd_Smed_v6_12752_0_1, [RH, Score=252, Expect=3e-72]} {RNA1509_8718} {RNA1310_5638.1} {RNA815_9138}
16. MligTC455_41254 59 1.23 Mlig455_052520

Neo: Int S/G2/M

Age: -

 0.95 - - - - 0.950 - Mlig455_052520 {REF} {Length: 8122} {Smed: dd_Smed_v6_24483_0_1, dd_Smed_v6_24483_0_1, [Score=85.5, Expect=3e-18]} {RNA1509_53555} {RNA1310_50995} {RNA815_38632}

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