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Results for MligTC455_19472

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19472 250 5.21 Mlig455_045277

Neo: -

Age: -

 MINDY4B Mlig455_045277 {REF} {Length: 2820} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=273.6]} {Human: ENSG00000214237, MINDY4B, MINDY family member 4B, [Score=160, Expect=6e-43]} {Mouse: ENSMUSG00000101860, Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, [Score=160, Expect=6e-43]; ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=159, Expect=2e-41]} {Dmel: FBgn0036143, CG14142, [Score=146, Expect=4e-38]} {Smed: dd_Smed_v6_14822_0_1, dd_Smed_v6_14822_0_1, [RH, Score=262, Expect=8e-81]} {RNA1509_15560} {RNA1310_7214.1, RNA1509_15560} {RNA1509_15560, RNA815_22013}

Cumulative graph for MligTC455_19472

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.424 2.936 0.32935 0.97627
RegionR2 1.859 2.936 0.01532 0.13071
RegionR3 0.597 2.936 0.40492 0.93215
RegionR4 1.121 2.936 0.14642 0.39341
RegionR5 0.822 2.936 0.22609 0.53058
RegionR6 0.337 2.936 0.59451 1.00000
RegionR7 0.443 2.936 0.56897 1.00000
RegionR8 -6.602 2.936 0.00638 0.14511

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.269 2.936 0.17635 0.91875
RegenerationR2 -0.251 2.936 0.58908 0.91074
RegenerationR3 0.634 2.936 0.26678 0.70148
RegenerationR4 -0.441 2.936 0.46373 0.84930
RegenerationR5 0.429 2.936 0.40084 0.79987
RegenerationR6 0.339 2.936 0.59690 0.86719
RegenerationBL 1.878 2.936 0.20348 0.54350
RegenerationTP 2.576 2.936 0.18027 0.61574


Genes with expression patterns similar to MligTC455_19472

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19472 250 5.21 Mlig455_045277

Neo: -

Age: -

 MINDY4B 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_045277 {REF} {Length: 2820} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=273.6]} {Human: ENSG00000214237, MINDY4B, MINDY family member 4B, [Score=160, Expect=6e-43]} {Mouse: ENSMUSG00000101860, Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, [Score=160, Expect=6e-43]; ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=159, Expect=2e-41]} {Dmel: FBgn0036143, CG14142, [Score=146, Expect=4e-38]} {Smed: dd_Smed_v6_14822_0_1, dd_Smed_v6_14822_0_1, [RH, Score=262, Expect=8e-81]} {RNA1509_15560} {RNA1310_7214.1, RNA1509_15560} {RNA1509_15560, RNA815_22013}
2. MligTC455_17400 96 2.01 Mlig455_001330

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_001330 {REF} {Length: 852} {NoTransDecoderORF} {RNA1509_21152} {RNA1310_52971} {RNA815_27913}
3. MligTC455_17399 133 2.78 Mlig455_001172

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.765

 0.972 - - - - - 0.972 Mlig455_001172 {REF} {Length: 3270} {TRANSSPLICED} {RNA1509_55944} {RNA1310_7230} {RNA815_15379}
4. MligTC455_47784 987 20.56 Mlig455_042427, Mlig455_042482

Neo: Irradiation

Age: Down-Up-Down

 LPIN3 0.97 - - - - - 0.970

Mlig455_042427 {REF} {Length: 3949} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.0]; lipin, N-terminal conserved region [PF04571.16, score=124.4]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.2]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=447, Expect=2e-144]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=441, Expect=3e-142]; ENSMUSG00000020593, Lpin1, lipin 1, [RH, Score=427, Expect=2e-136]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=2e-108]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=2e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=1e-130]} {RNA1509_2460} {RNA1310_4371} {RNA815_2379.1}

Mlig455_042482 {REF} {Length: 3845} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.1]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.3]; lipin, N-terminal conserved region [PF04571.16, score=87.5]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=414, Expect=5e-132]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=401, Expect=2e-127]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=6e-109]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=1e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=2e-131]} {RNA1509_2460, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1310_4371, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1509_26861, RNA1509_31871, RNA1509_42018, RNA815_2379.1}
5. MligTC455_25471 545 11.35 Mlig455_021774

Neo: -

Age: Up-Down-Down

 0.967 - - - - - 0.967 Mlig455_021774 {REF} {Length: 4546} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=18.1]} {RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1310_4091.1, RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1509_21568, RNA1509_33358, RNA1509_36305, RNA815_163.1}
6. MligTC455_26552 265 5.52 Mlig455_055200

Neo: -

Age: Up-Down-Down

 FOXP4 0.955 - - - 0.955 - - Mlig455_055200 {REF} {Length: 5570} {Pfam: Forkhead domain [PF00250.20, score=92.5]; FOXP coiled-coil domain [PF16159.7, score=60.0]} {Human: ENSG00000137166, FOXP4, forkhead box P4, [RH, Score=189, Expect=2e-51]; ENSG00000128573, FOXP2, forkhead box P2, [RH, Score=187, Expect=2e-50]} {Mouse: ENSMUSG00000116496, Foxp4, forkhead box P4, [RH, Score=191, Expect=3e-52]; ENSMUSG00000023991, Foxp4, forkhead box P4, [RH, Score=191, Expect=3e-52]; ENSMUSG00000029563, Foxp2, forkhead box P2, [RH, Score=187, Expect=1e-50]} {Dmel: FBgn0262477, FoxP, Forkhead box P, [RH, Score=216, Expect=2e-63]} {Celegans: WBGene00001439, fkh-7, ForKHead transcription factor family, [RH, Score=197, Expect=3e-54]} {Smed: dd_Smed_v6_6316_0_1, dd_Smed_v6_6316_0_1, [RH, Score=113, Expect=2e-26]} {RNA1509_18798} {RNA1310_9496.1} {RNA815_1593}
7. MligTC455_50297 112 2.33 Mlig455_001278

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.874

 0.95 - - - - - 0.950 Mlig455_001278 {REF} {Length: 6519} {RNA1509_40739} {RNA1310_7443.1} {RNA815_11554}

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