Data search
Results for MligTC455_25471
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25471 | 545 | 11.35 | Mlig455_021774 | Neo: - Age: Up-Down-Down |
Mlig455_021774 {REF} {Length: 4546} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=18.1]} {RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1310_4091.1, RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1509_21568, RNA1509_33358, RNA1509_36305, RNA815_163.1} |
Cumulative graph for MligTC455_25471
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.016 | 3.912 | 0.98909 | 1.00000 | |
| RegionR2 | -0.58 | 3.912 | 0.25938 | 0.64032 | |
| RegionR3 | -1.117 | 3.912 | 0.02051 | 0.24078 | |
| RegionR4 | 1.081 | 3.912 | 0.04586 | 0.18197 | |
| RegionR5 | 0.653 | 3.912 | 0.08214 | 0.26691 | |
| RegionR6 | -0.219 | 3.912 | 0.61774 | 1.00000 | |
| RegionR7 | -0.137 | 3.912 | 0.80741 | 1.00000 | |
| RegionR8 | 0.335 | 3.912 | 0.60788 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.73 | 3.912 | 0.73003 | 1.00000 | |
| RegenerationR2 | -0.013 | 3.912 | 0.97260 | 1.00000 | |
| RegenerationR3 | 0.165 | 3.912 | 0.73585 | 0.95929 | |
| RegenerationR4 | -0.248 | 3.912 | 0.60029 | 0.91355 | |
| RegenerationR5 | -0.138 | 3.912 | 0.73279 | 0.96496 | |
| RegenerationR6 | -0.446 | 3.912 | 0.33692 | 0.68338 | |
| RegenerationBL | -0.522 | 3.912 | 0.34614 | 0.71354 | |
| RegenerationTP | -1.29 | 3.912 | 0.04815 | 0.36079 |
Genes with expression patterns similar to MligTC455_25471
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25471 | 545 | 11.35 | Mlig455_021774 | Neo: - Age: Up-Down-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021774 {REF} {Length: 4546} {TRANSSPLICED} {Pfam: Glypican [PF01153.21, score=18.1]} {RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1310_4091.1, RNA1509_21568, RNA1509_33358, RNA1509_36305} {RNA1509_21568, RNA1509_33358, RNA1509_36305, RNA815_163.1} | |
| 2. | MligTC455_47784 | 987 | 20.56 | Mlig455_042427, Mlig455_042482 | Neo: Irradiation Age: Down-Up-Down |
LPIN3 | 1.738 | 0.765 | - | - | - | - | 0.973 | Mlig455_042427 {REF} {Length: 3949} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.0]; lipin, N-terminal conserved region [PF04571.16, score=124.4]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.2]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=447, Expect=2e-144]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=441, Expect=3e-142]; ENSMUSG00000020593, Lpin1, lipin 1, [RH, Score=427, Expect=2e-136]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=2e-108]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=2e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=1e-130]} {RNA1509_2460} {RNA1310_4371} {RNA815_2379.1} Mlig455_042482 {REF} {Length: 3845} {Pfam: LNS2 (Lipin/Ned1/Smp2) [PF08235.15, score=315.1]; Lipin/Ned1/Smp2 multi-domain protein middle domain [PF16876.7, score=88.3]; lipin, N-terminal conserved region [PF04571.16, score=87.5]} {Human: ENSG00000132793, LPIN3, lipin 3, [RH, Score=414, Expect=5e-132]} {Mouse: ENSMUSG00000027412, Lpin3, lipin 3, [RH, Score=401, Expect=2e-127]} {Dmel: FBgn0263593, Lpin, Lipin, [RH, Score=355, Expect=6e-109]} {Celegans: WBGene00010425, lpin-1, LiPIN (Mammalian lipodystrophy associated) homolog, [RH, Score=255, Expect=1e-73]} {Smed: dd_Smed_v6_8002_0_1, dd_Smed_v6_8002_0_1, [RH, Score=407, Expect=2e-131]} {RNA1509_2460, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1310_4371, RNA1509_26861, RNA1509_31871, RNA1509_42018} {RNA1509_26861, RNA1509_31871, RNA1509_42018, RNA815_2379.1} |
| 3. | MligTC455_19472 | 250 | 5.21 | Mlig455_045277 | Neo: - Age: - |
MINDY4B | 0.967 | - | - | - | - | - | 0.967 | Mlig455_045277 {REF} {Length: 2820} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=273.6]} {Human: ENSG00000214237, MINDY4B, MINDY family member 4B, [Score=160, Expect=6e-43]} {Mouse: ENSMUSG00000101860, Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, [Score=160, Expect=6e-43]; ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=159, Expect=2e-41]} {Dmel: FBgn0036143, CG14142, [Score=146, Expect=4e-38]} {Smed: dd_Smed_v6_14822_0_1, dd_Smed_v6_14822_0_1, [RH, Score=262, Expect=8e-81]} {RNA1509_15560} {RNA1310_7214.1, RNA1509_15560} {RNA1509_15560, RNA815_22013} |
| 4. | MligTC455_27660 | 736 | 15.33 | Mlig455_064735 | Neo: - Age: - |
COQ3 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_064735 {REF} {Length: 1717} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13489.8, score=79.3]; Methyltransferase domain [PF08241.14, score=70.0]; Methyltransferase domain [PF13649.8, score=57.4]; Methyltransferase domain [PF08242.14, score=52.4]; Methyltransferase domain [PF13847.8, score=49.8]; Mycolic acid cyclopropane synthetase [PF02353.22, score=28.9]; Methyltransferase domain [PF13679.8, score=20.8]; Methyltransferase small domain [PF05175.16, score=19.4]; Nodulation protein S (NodS) [PF05401.13, score=19.3]} {Human: ENSG00000132423, COQ3, coenzyme Q3, methyltransferase, [RH, Score=204, Expect=2e-63]} {Mouse: ENSMUSG00000028247, Coq3, coenzyme Q3 methyltransferase, [RH, Score=202, Expect=9e-63]} {Dmel: FBgn0032922, CG9249, [RH, Score=148, Expect=8e-43]} {Celegans: WBGene00000763, coq-3, Ubiquinone biosynthesis O-methyltransferase, mitochondrial, [RH, Score=167, Expect=9e-51]} {Smed: dd_Smed_v6_9618_0_1, dd_Smed_v6_9618_0_1, [RH, Score=172, Expect=2e-52]} {RNA1509_44835} {RNA1310_20921.1, RNA1509_44835} {RNA1509_44835, RNA815_12330} |
| 5. | MligTC455_54182 | 455 | 9.47 | Mlig455_065415 | Neo: - Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_065415 {REF} {Length: 1147} {NoTransDecoderORF} {RNA1509_25326} {RNA1310_19426, RNA1509_25326} {RNA1509_25326, RNA815_10758} | |
| 6. | MligTC455_52795 | 674 | 14.04 | Mlig455_058194 | Neo: - Age: - |
TMEM117 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_058194 {REF} {Length: 4435} {TRANSSPLICED} {Pfam: TMEM117 protein family [PF15113.8, score=543.0]} {Human: ENSG00000139173, TMEM117, transmembrane protein 117, [RH, Score=419, Expect=3e-137]} {Mouse: ENSMUSG00000063296, Tmem117, transmembrane protein 117, [RH, Score=422, Expect=5e-139]} {RNA1509_36999, RNA1509_4844} {RNA1310_1174, RNA1509_36999, RNA1509_4844} {RNA1509_36999, RNA1509_4844, RNA815_2317.1} |
| 7. | MligTC455_24450 | 277 | 5.77 | Mlig455_034611 | Neo: - Age: - |
0.953 | - | - | 0.953 | - | - | - | Mlig455_034611 {REF} {Length: 1827} {RNA1509_35741} {RNA1310_52741, RNA1509_35741} {RNA1509_35741, RNA815_31821} | |
| 8. | MligTC455_27251 | 266 | 5.55 | Mlig455_016125 | Neo: - Age: logFC(26M/2M)=-0.334 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_016125 {REF} {Length: 5004} {TRANSSPLICED} {RNA1509_21530, RNA1509_8503} {RNA1310_2892.1, RNA1509_21530, RNA1509_8503} {RNA1509_21530, RNA1509_8503, RNA815_1285} | |
| 9. | MligTC455_32833 | 193 | 4.02 | Mlig455_011012 | Neo: - Age: logFC(26M/2M)=0.827 |
IFT52 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_011012 {REF} {Length: 4326} {TRANSSPLICED} {Pfam: RNA polymerase III transcription factor (TF)IIIC subunit HTH domain [PF09734.11, score=59.9]; Tau95 Triple barrel domain [PF17682.3, score=49.4]} {Human: ENSG00000101052, IFT52, intraflagellar transport 52, [Score=319, Expect=9e-102]} {Mouse: ENSMUSG00000017858, Ift52, intraflagellar transport 52, [Score=330, Expect=3e-106]} {Dmel: FBgn0031829, IFT52, Intraflagellar transport 52, [Score=171, Expect=6e-47]} {Celegans: WBGene00003886, osm-6, Osm-6 protein, [Score=218, Expect=1e-63]} {Smed: dd_Smed_v6_5043_0_1, dd_Smed_v6_5043_0_1, [Score=350, Expect=2e-114]} {RNA1509_8537} {RNA1310_16849} {RNA815_7203} |
| 10. | MligTC455_51616 | 282 | 5.88 | Mlig455_002489 | Neo: - Age: logFC(26M/2M)=0.563 |
GTF2E1 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_002489 {REF} {Length: 2947} {TRANSSPLICED} {Pfam: C-terminal general transcription factor TFIIE alpha [PF11521.10, score=52.8]; TFIIE alpha subunit [PF02002.19, score=42.8]; Cwf15/Cwc15 cell cycle control protein [PF04889.14, score=18.4]} {Human: ENSG00000153767, GTF2E1, general transcription factor IIE subunit 1, [RH, Score=175, Expect=1e-49]} {Mouse: ENSMUSG00000022828, Gtf2e1, general transcription factor II E, polypeptide 1 (alpha subunit), [RH, Score=166, Expect=3e-46]} {Dmel: FBgn0015828, TfIIEalpha, Transcription factor IIEalpha, [RH, Score=192, Expect=1e-56]} {Celegans: WBGene00013998, ZK550.4, TFIIE-alpha protein, [RH, Score=119, Expect=2e-29]} {RNA1509_12301} {RNA1310_18689, RNA1509_12301} {RNA1509_12301, RNA815_13496} |
| 11. | MligTC455_44084 | 235 | 4.9 | Mlig455_011457 | Neo: - Age: - |
FLCN | 0.95 | - | - | - | - | - | 0.950 | Mlig455_011457 {REF} {Length: 5279} {TRANSSPLICED} {Pfam: Vesicle coat protein involved in Golgi to plasma membrane transport [PF11704.10, score=126.0]; Forkhead domain [PF00250.20, score=110.5]; Folliculin C-terminal domain [PF16692.7, score=107.0]} {Human: ENSG00000154803, FLCN, folliculin, [Score=209, Expect=1e-56]} {Mouse: ENSMUSG00000032633, Flcn, folliculin, [Score=208, Expect=1e-56]} {Dmel: FBgn0029504, CHES-1-like, Checkpoint suppressor 1-like, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00017699, flcn-1, F22D3.2 protein; FoLliCuliN, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_4329_0_2, dd_Smed_v6_4329_0_2, [Score=148, Expect=3e-37]} {RNA1509_11130, RNA1509_33195} {RNA1310_5404, RNA1509_33195} {RNA1509_33195, RNA815_1916} |
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