TomoSeq data search

Data search

Results for MligTC455_19575

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_19575

245

5.10

Mlig455_049753, Mlig455_049754

Neo: -

Age: Down-Down-Up

TXNRD2

Mlig455_049753 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}

Mlig455_049754 {REF} {Length: 3701} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}

Cumulative graph for MligTC455_19575

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.01	2.743	0.15314	0.76970
RegionR2	1.46	2.743	0.14843	0.48111
RegionR3	1.301	2.743	0.13873	0.63617
RegionR4	0.085	2.743	0.82309	1.00000
RegionR5	-0.633	2.743	0.96770	1.00000
RegionR6	0.161	2.743	0.79048	1.00000
RegionR7	2.26	2.743	0.00437	0.09996
RegionR8	1.375	2.743	0.19787	0.79440

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.617	2.743	0.99987	1.00000
RegenerationR2	-0.639	2.743	0.35449	0.78476
RegenerationR3	-0.657	2.743	0.39444	0.79902
RegenerationR4	0.074	2.743	0.93332	1.00000
RegenerationR5	0.897	2.743	0.24561	0.67872
RegenerationR6	0.719	2.743	0.37920	0.72062
RegenerationBL	-1.156	2.743	0.23469	0.58752
RegenerationTP	-1.814	2.743	0.07036	0.42553

Genes with expression patterns similar to MligTC455_19575

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_19575	245	5.1	Mlig455_049753, Mlig455_049754	Neo: - Age: Down-Down-Up	TXNRD2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049753 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934} Mlig455_049754 {REF} {Length: 3701} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}
2.	MligTC455_14236	149	3.1	Mlig455_017105	Neo: - Age: Up-Down-Down	WDSUB1	1.705	-	-	0.750	-	-	0.955	Mlig455_017105 {REF} {Length: 3758} {Pfam: WD domain, G-beta repeat [PF00400.34, score=166.2]; U-box domain [PF04564.17, score=59.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=44.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=42.6]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.6]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [Score=210, Expect=2e-60]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [Score=197, Expect=2e-56]} {Dmel: FBgn0021874, Nle, Notchless, [Score=105, Expect=9e-24]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=99.0, Expect=5e-22]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [Score=103, Expect=2e-24]} {RNA1310_51636} {RNA815_18559}
3.	MligTC455_19982	171	3.57	Mlig455_040004	Neo: - Age: -	SH3PXD2A	1.7	-	-	0.739	-	-	0.961	Mlig455_040004 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: PX domain [PF00787.26, score=53.5]; Variant SH3 domain [PF14604.8, score=24.8]; Variant SH3 domain [PF07653.19, score=21.9]} {Human: ENSG00000107957, SH3PXD2A, SH3 and PX domains 2A, [RH, Score=131, Expect=2e-32]; ENSG00000174705, SH3PXD2B, SH3 and PX domains 2B, [RH, Score=128, Expect=2e-31]} {Mouse: ENSMUSG00000053617, Sh3pxd2a, SH3 and PX domains 2A, [RH, Score=130, Expect=5e-32]; ENSMUSG00000040711, Sh3pxd2b, SH3 and PX domains 2B, [RH, Score=129, Expect=9e-32]} {RNA1509_20826} {RNA1310_30403} {RNA815_36408}
4.	MligTC455_48088	154	3.21	Mlig455_069669	Neo: - Age: -		1.683	-	-	-	-	0.733	0.950	Mlig455_069669 {REF} {Length: 1538} {NoTransDecoderORF} {RNA1509_23706} {RNA1310_39789} {RNA815_19330.1}
5.	MligTC455_42667	127	2.65	Mlig455_050812	Neo: - Age: -	TBC1D15	1.672	-	-	-	-	0.955	0.717	Mlig455_050812 {REF} {Length: 3910} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=169.9]} {Human: ENSG00000121749, TBC1D15, TBC1 domain family member 15, [Score=308, Expect=1e-95]} {Mouse: ENSMUSG00000020130, Tbc1d15, TBC1 domain family, member 15, [RH, Score=315, Expect=2e-98]} {Dmel: FBgn0031233, Tbc1d15-17, TBC1 domain family member 15/17, [RH, Score=301, Expect=7e-93]} {Celegans: WBGene00008444, tbc-14, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=288, Expect=6e-89]} {Smed: dd_Smed_v6_1756_0_1, dd_Smed_v6_1756_0_1, [Score=263, Expect=1e-79]} {RNA1509_19907} {RNA1310_11028, RNA1509_19907} {RNA1509_19907, RNA815_16751}
6.	MligTC455_42669	105	2.18	Mlig455_014974	Neo: - Age: -		0.977	-	-	-	-	-	0.977	Mlig455_014974 {REF} {Length: 1533} {RNA1310_21601}
7.	MligTC455_38257	159	3.31	Mlig455_012808, Mlig455_047421, Mlig455_070483	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_012808 {REF} {Length: 4065} {RNA1310_64880} Mlig455_047421 {REF} {Length: 6870} {RNA1509_15668} {RNA1310_64880} {RNA815_39775} Mlig455_070483 {REF} {Length: 3618} {RNA1310_64880}
8.	MligTC455_42390	59	1.23	Mlig455_012035, Mlig455_047623, Mlig455_062112	Neo: - Age: -		0.958	-	-	0.958	-	-	-	Mlig455_012035 {REF} {Length: 761} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=96.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.9]; Integrase zinc binding domain [PF17921.3, score=50.9]; Integrase core domain [PF00665.28, score=44.1]; Zinc knuckle [PF00098.25, score=25.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=313, Expect=2e-89]} {RNA1509_59441} {RNA1310_15955.2} {RNA815_38827} Mlig455_047623 {REF} {Length: 4618} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.9]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=96.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.9]; Integrase zinc binding domain [PF17921.3, score=50.9]; Integrase core domain [PF00665.28, score=44.1]; Zinc knuckle [PF00098.25, score=25.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=313, Expect=2e-89]} {RNA1509_59441} {RNA1310_15955.1} {RNA815_29276} Mlig455_062112 {REF} {Length: 5197} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.3]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=95.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.5]; Integrase zinc binding domain [PF17921.3, score=51.6]; Integrase core domain [PF00665.28, score=44.3]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=300, Expect=2e-86]} {RNA1509_59441} {RNA1310_15955.1, RNA1509_59441} {RNA1509_59441, RNA815_29276}
9.	MligTC455_24936	37	0.77	Mlig455_002505	Neo: - Age: -	NAA40	0.955	-	-	0.955	-	-	-	Mlig455_002505 {REF} {Length: 1146} {Pfam: Acetyltransferase (GNAT) family [PF00583.27, score=35.1]; Acetyltransferase (GNAT) domain [PF13508.9, score=23.6]; FR47-like protein [PF08445.12, score=19.3]; Acetyltransferase (GNAT) domain [PF13420.9, score=18.8]} {Human: ENSG00000110583, NAA40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [Score=84.3, Expect=4e-20]} {Mouse: ENSMUSG00000024764, Naa40, N(alpha)-acetyltransferase 40, NatD catalytic subunit, [Score=84.0, Expect=3e-20]} {Dmel: FBgn0039687, Naa40, N(alpha)-acetyltransferase 40, [Score=62.4, Expect=2e-12]} {Celegans: WBGene00021392, Y38A10A.7, [Score=84.0, Expect=2e-20]} {Smed: dd_Smed_v6_5816_0_1, dd_Smed_v6_5816_0_1, [Score=89.7, Expect=7e-23]} {RNA1509_41870} {RNA1310_14010.1, RNA1509_41870} {RNA1509_41870, RNA815_52371}
10.	MligTC455_28400	91	1.9	Mlig455_023643	Neo: - Age: Down-Up-Down		0.955	-	-	-	-	-	0.955	Mlig455_023643 {REF} {Length: 1957} {TRANSSPLICED} {Pfam: Ctr copper transporter family [PF04145.17, score=30.8]} {Dmel: FBgn0062413, Ctr1A, Copper transporter 1A, [Score=45.4, Expect=5e-06]} {RNA1509_2913} {RNA1310_42494} {RNA815_39416}
11.	MligTC455_39876	129	2.69	Mlig455_006058	Neo: - Age: - Region-enriched R2: 3.934/0.04615	NOC3L	0.954	-	-	-	-	-	0.954	Mlig455_006058 {REF} {Length: 3753} {TRANSSPLICED} {Pfam: Nucleolar complex-associated protein [PF07540.13, score=78.7]} {Human: ENSG00000173145, NOC3L, NOC3 like DNA replication regulator, [RH, Score=204, Expect=2e-55]} {Mouse: ENSMUSG00000024999, Noc3l, NOC3 like DNA replication regulator, [RH, Score=200, Expect=4e-54]} {Dmel: FBgn0037489, CG1234, [RH, Score=159, Expect=2e-40]} {Celegans: WBGene00016508, C37H5.5, Nucleolar complex protein 3 homolog, [RH, Score=139, Expect=4e-34]} {Smed: dd_Smed_v6_13062_0_1, dd_Smed_v6_13062_0_1, [RH, Score=99.0, Expect=1e-21]} {RNA1509_7132} {RNA1310_9494, RNA1509_7132} {RNA1509_7132, RNA815_11181}
12.	MligTC455_28125	151	3.15	Mlig455_031085, Mlig455_031119	Neo: - Age: logFC(26M/2M)=0.432 Regeneration-upregulated BL: 3.640 Regeneration-enriched BL: 3.640		0.953	-	-	0.953	-	-	-	Mlig455_031085 {REF} {Length: 1450} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1} Mlig455_031119 {REF} {Length: 2990} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
13.	MligTC455_52595	29	0.59	Mlig455_066185	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.682	COPB1	0.952	-	-	-	-	-	0.952	Mlig455_066185 {REF} {Length: 5666} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=360.2]; Coatomer beta C-terminal region [PF07718.14, score=182.5]; Coatomer beta subunit appendage platform [PF14806.8, score=153.2]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=37.3]; PDZ domain [PF17820.3, score=32.6]; PDZ domain [PF00595.26, score=32.4]; HEAT repeats [PF13646.8, score=27.1]; HEAT repeat [PF02985.24, score=20.9]; HEAT-like repeat [PF13513.8, score=19.6]} {Human: ENSG00000129083, COPB1, coatomer protein complex subunit beta 1, [RH, Score=1267, Expect=0.0]} {Mouse: ENSMUSG00000030754, Copb1, coatomer protein complex, subunit beta 1, [RH, Score=1270, Expect=0.0]} {Dmel: FBgn0008635, betaCOP, Coat Protein (coatomer) beta, [RH, Score=1166, Expect=0.0]} {Celegans: WBGene00021292, copb-1, Coatomer subunit beta, [RH, Score=1066, Expect=0.0]} {Smed: dd_Smed_v6_1208_0_1, dd_Smed_v6_1208_0_1, [RH, Score=1132, Expect=0.0]} {RNA1509_1298} {RNA1310_2383} {RNA815_1794}
14.	MligTC455_11137	65	1.36	Mlig455_007742	Neo: - Age: -	FAT1	0.951	-	-	-	-	-	0.951	Mlig455_007742 {REF} {Length: 4301} {Pfam: Cadherin domain [PF00028.19, score=102.1]; EGF-like domain [PF00008.29, score=51.2]; Calcium-binding EGF domain [PF07645.17, score=33.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=207, Expect=2e-53]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=212, Expect=5e-55]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=210, Expect=2e-54]} {Dmel: FBgn0261574, kug, kugelei, [Score=155, Expect=9e-38]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=161, Expect=1e-39]} {RNA1509_55673} {RNA1310_45646} {RNA815_38697}

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