TomoSeq data search

Data search

Results for MligTC455_42667

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_42667	127	2.65	Mlig455_050812	Neo: - Age: -	TBC1D15	Mlig455_050812 {REF} {Length: 3910} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=169.9]} {Human: ENSG00000121749, TBC1D15, TBC1 domain family member 15, [Score=308, Expect=1e-95]} {Mouse: ENSMUSG00000020130, Tbc1d15, TBC1 domain family, member 15, [RH, Score=315, Expect=2e-98]} {Dmel: FBgn0031233, Tbc1d15-17, TBC1 domain family member 15/17, [RH, Score=301, Expect=7e-93]} {Celegans: WBGene00008444, tbc-14, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=288, Expect=6e-89]} {Smed: dd_Smed_v6_1756_0_1, dd_Smed_v6_1756_0_1, [Score=263, Expect=1e-79]} {RNA1509_19907} {RNA1310_11028, RNA1509_19907} {RNA1509_19907, RNA815_16751}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_42667

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.033	2.184	0.23064	0.87434
RegionR2	2.065	2.184	0.02488	0.17607
RegionR3	0.327	2.184	0.62762	1.00000
RegionR4	-2.496	2.184	0.00776	0.05042
RegionR5	-0.399	2.184	0.45317	0.81498
RegionR6	0.208	2.184	0.76952	1.00000
RegionR7	1.211	2.184	0.17959	0.77614
RegionR8	1.118	2.184	0.35234	0.98569

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.107	2.184	0.73585	1.00000
RegenerationR2	-1.451	2.184	0.11902	0.53690
RegenerationR3	0.259	2.184	0.72945	0.95749
RegenerationR4	-0.452	2.184	0.63742	0.92618
RegenerationR5	-0.212	2.184	0.80518	0.98981
RegenerationR6	-0.722	2.184	0.47150	0.78558
RegenerationBL	-0.474	2.184	0.68670	1.00000
RegenerationTP	-1.644	2.184	0.25927	0.70701

Genes with expression patterns similar to MligTC455_42667

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_42667	127	2.65	Mlig455_050812	Neo: - Age: -	TBC1D15	4	1.000	1.000	-	-	1.000	1.000	Mlig455_050812 {REF} {Length: 3910} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=169.9]} {Human: ENSG00000121749, TBC1D15, TBC1 domain family member 15, [Score=308, Expect=1e-95]} {Mouse: ENSMUSG00000020130, Tbc1d15, TBC1 domain family, member 15, [RH, Score=315, Expect=2e-98]} {Dmel: FBgn0031233, Tbc1d15-17, TBC1 domain family member 15/17, [RH, Score=301, Expect=7e-93]} {Celegans: WBGene00008444, tbc-14, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=288, Expect=6e-89]} {Smed: dd_Smed_v6_1756_0_1, dd_Smed_v6_1756_0_1, [Score=263, Expect=1e-79]} {RNA1509_19907} {RNA1310_11028, RNA1509_19907} {RNA1509_19907, RNA815_16751}
2.	MligTC455_19575	245	5.1	Mlig455_049753, Mlig455_049754	Neo: - Age: Down-Down-Up	TXNRD2	1.672	-	-	-	-	0.955	0.717	Mlig455_049753 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934} Mlig455_049754 {REF} {Length: 3701} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}
3.	MligTC455_36183	9	0.19	Mlig455_043828	Neo: - Age: -		0.955	-	-	-	-	0.955	-	Mlig455_043828 {REF} {Length: 452} {NoTransDecoderORF} {RNA1509_50500} {RNA1310_101668} {RNA815_48361}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_42667

127

2.65

Mlig455_050812

Neo: -

Age: -

TBC1D15

1.000

MligTC455_19575

245

5.1

Mlig455_049753, Mlig455_049754

Neo: -

Age: Down-Down-Up

TXNRD2

1.672

0.955

0.717

Mlig455_049753 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}

Mlig455_049754 {REF} {Length: 3701} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=166.1]; LCCL domain [PF03815.21, score=76.3]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=70.3]; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain [PF02852.24, score=55.0]; Histone deacetylation protein Rxt3 [PF08642.12, score=33.4]; Zinc-finger double domain [PF13465.8, score=30.3]; Zinc finger, C2H2 type [PF00096.28, score=29.1]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=26.6]; C2H2-type zinc finger [PF13894.8, score=24.2]; FAD binding domain [PF00890.26, score=21.3]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=20.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=19.2]; HI0933-like protein [PF03486.16, score=18.1]} {Human: ENSG00000184470, TXNRD2, thioredoxin reductase 2, [Score=408, Expect=1e-131]} {Mouse: ENSMUSG00000099282, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]; ENSMUSG00000075704, Txnrd2, thioredoxin reductase 2, [Score=452, Expect=2e-148]} {Dmel: FBgn0037170, Trxr-2, thioredoxin reductase 2, [Score=420, Expect=5e-136]} {Celegans: WBGene00014028, trxr-2, Probable glutathione reductase 2, [Score=379, Expect=1e-120]} {Smed: dd_Smed_v6_4969_0_2, dd_Smed_v6_4969_0_2, [Score=426, Expect=2e-138]} {RNA1509_18125} {RNA1310_14820} {RNA815_14934}

MligTC455_36183

0.19

Mlig455_043828

Neo: -

Age: -

0.955

Mlig455_043828 {REF} {Length: 452} {NoTransDecoderORF} {RNA1509_50500} {RNA1310_101668} {RNA815_48361}