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Results for MligTC455_19608

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19608 1127 23.48 Mlig455_049920

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.337/0.01716

 NOTCH3 Mlig455_049920 {REF} {Length: 1363} {Human: ENSG00000074181, NOTCH3, notch 3, [Score=52.4, Expect=1e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=48.9, Expect=1e-06]; ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=46.6, Expect=8e-06]} {Dmel: FBgn0259140, CG42255, [Score=47.4, Expect=3e-06]} {RNA1509_35808} {RNA1310_29607.1} {RNA815_12976.1}

Cumulative graph for MligTC455_19608

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.138 4.751 0.07779 0.61287
RegionR2 -0.02 4.751 0.96653 1.00000
RegionR3 0.301 4.751 0.40624 0.93273
RegionR4 1.337 4.751 0.00189 0.01716
RegionR5 -0.186 4.751 0.63438 0.98702
RegionR6 0.435 4.751 0.23757 0.82123
RegionR7 0.361 4.751 0.42509 1.00000
RegionR8 -0.089 4.751 0.88865 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.858 4.751 0.21168 0.95076
RegenerationR2 0.161 4.751 0.63984 0.93129
RegenerationR3 0.257 4.751 0.49008 0.85400
RegenerationR4 -0.267 4.751 0.48857 0.86368
RegenerationR5 0.783 4.751 0.03605 0.31453
RegenerationR6 -0.169 4.751 0.65741 0.90197
RegenerationBL 0.162 4.751 0.69581 1.00000
RegenerationTP -0.134 4.751 0.78294 1.00000


Genes with expression patterns similar to MligTC455_19608

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19608 1127 23.48 Mlig455_049920

Neo: -

Age: Down-Down-Up

Region-enriched R4: 1.337/0.01716

 NOTCH3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049920 {REF} {Length: 1363} {Human: ENSG00000074181, NOTCH3, notch 3, [Score=52.4, Expect=1e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=48.9, Expect=1e-06]; ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=46.6, Expect=8e-06]} {Dmel: FBgn0259140, CG42255, [Score=47.4, Expect=3e-06]} {RNA1509_35808} {RNA1310_29607.1} {RNA815_12976.1}
2. MligTC455_36294 1175 24.48 Mlig455_024694

Neo: -

Age: logFC(26M/2M)=-0.367

 2.66 - - 0.835 0.869 0.956 - Mlig455_024694 {REF} {Length: 8832} {Pfam: RyR and IP3R Homology associated [PF08454.13, score=53.1]; RIH domain [PF01365.23, score=49.5]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=48.1]; MIR domain [PF02815.21, score=43.3]; Ion transport protein [PF00520.33, score=21.8]} {Smed: dd_Smed_v6_13538_0_1, dd_Smed_v6_13538_0_1, [RH, Score=880, Expect=0.0]} {RNA1509_1471} {RNA1310_176.1, RNA1509_1471} {RNA1509_1471, RNA815_70}
3. MligTC455_48507 330 6.88 Mlig455_030151

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.466

 TMEM232 1.833 0.968 - - - 0.865 - Mlig455_030151 {REF} {Length: 2337} {TRANSSPLICED} {Pfam: Transmembrane protein family 232 [PF15877.7, score=221.6]} {Human: ENSG00000186952, TMEM232, transmembrane protein 232, [Score=155, Expect=2e-39]} {Mouse: ENSMUSG00000045036, Tmem232, transmembrane protein 232, [Score=164, Expect=2e-42]} {Smed: dd_Smed_v6_15138_0_1, dd_Smed_v6_15138_0_1, [RH, Score=160, Expect=8e-42]} {RNA1509_11088} {RNA1310_8942.1} {RNA815_6522}
4. MligTC455_36611 250 5.21 Mlig455_063856

Neo: -

Age: -

 1.831 0.956 - - - 0.875 - Mlig455_063856 {REF} {Length: 1172} {RNA1509_17799} {RNA1310_27750.1} {RNA815_14952}
5. MligTC455_23937 107 2.23 Mlig455_044625

Neo: -

Age: -

 TRPM3 1.789 0.959 - - - 0.830 - Mlig455_044625 {REF} {Length: 5687} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.1]; Ankyrin repeats (3 copies) [PF12796.9, score=74.7]; Ankyrin repeat [PF13606.8, score=59.8]; Ion transport protein [PF00520.33, score=56.9]; Ankyrin repeat [PF00023.32, score=50.8]; Ankyrin repeats (many copies) [PF13857.8, score=38.8]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=139, Expect=1e-32]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=135, Expect=4e-31]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=135, Expect=4e-31]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=142, Expect=2e-33]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=136, Expect=1e-31]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=111, Expect=4e-24]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=112, Expect=2e-24]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=188, Expect=2e-48]} {RNA1509_32799} {RNA1310_1742.1} {RNA815_1771}
6. MligTC455_48906 2008 41.84 Mlig455_054110

Neo: -

Age: -

 CCDC113 1.77 0.957 0.813 - - - - Mlig455_054110 {REF} {Length: 1400} {Pfam: Domain of unknown function (DUF4201) [PF13870.8, score=145.0]} {Human: ENSG00000103021, CCDC113, coiled-coil domain containing 113, [RH, Score=204, Expect=2e-61]} {Mouse: ENSMUSG00000036598, Ccdc113, coiled-coil domain containing 113, [RH, Score=212, Expect=6e-65]} {Dmel: FBgn0031235, CG13693, [RH, Score=67.4, Expect=6e-12]} {Smed: dd_Smed_v6_11884_0_1, dd_Smed_v6_11884_0_1, [RH, Score=325, Expect=3e-109]} {RNA1509_4108} {RNA1310_19439} {RNA815_8863}
7. MligTC455_42379 521 10.85 Mlig455_027421

Neo: -

Age: Down-Up-Down

 1.769 0.961 - - - 0.808 - Mlig455_027421 {REF} {Length: 1480} {Smed: dd_Smed_v6_15589_0_1, dd_Smed_v6_15589_0_1, [Score=81.3, Expect=4e-17]} {RNA1509_13870, RNA1509_44294} {RNA1310_12385.1, RNA1509_44294} {RNA1509_44294, RNA815_4422}
8. MligTC455_17580 2178 45.37 Mlig455_048028

Neo: -

Age: Down-Up-Up

 1.768 - 0.802 - - 0.966 - Mlig455_048028 {REF} {Length: 5222} {RNA1509_12558, RNA1509_43882} {RNA1310_10969, RNA1509_43882} {RNA1509_43882, RNA815_3485.1}
9. MligTC455_23938 109 2.26 Mlig455_044682

Neo: -

Age: logFC(26M/2M)=0.355

 TRPM3 1.768 0.959 - - - 0.809 - Mlig455_044682 {REF} {Length: 6333} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=80.4]; Ankyrin repeats (3 copies) [PF12796.9, score=74.8]; Ankyrin repeat [PF13606.8, score=59.5]; Ion transport protein [PF00520.33, score=57.5]; Ankyrin repeat [PF00023.32, score=51.1]; Ankyrin repeats (many copies) [PF13857.8, score=38.9]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=139, Expect=2e-32]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=139, Expect=2e-32]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=139, Expect=2e-32]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=141, Expect=3e-33]; ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=140, Expect=4e-33]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=112, Expect=2e-24]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=111, Expect=2e-24]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=192, Expect=2e-49]} {RNA1509_19611, RNA1509_32799} {RNA1310_1742.1, RNA1509_19611, RNA1509_32799} {RNA1509_19611, RNA1509_32799, RNA815_1771}
10. MligTC455_41139 569 11.86 Mlig455_001282

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.661

 SLC6A3 1.736 0.957 - - - 0.779 - Mlig455_001282 {REF} {Length: 2522} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=533.2]} {Human: ENSG00000142319, SLC6A3, solute carrier family 6 member 3, [Score=451, Expect=1e-150]; ENSG00000276996, SLC6A3, solute carrier family 6 member 3, [Score=451, Expect=1e-150]; ENSG00000103546, SLC6A2, solute carrier family 6 member 2, [Score=439, Expect=8e-146]} {Mouse: ENSMUSG00000021609, Slc6a3, solute carrier family 6 (neurotransmitter transporter, dopamine), member 3, [Score=452, Expect=3e-151]; ENSMUSG00000055368, Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2, [Score=443, Expect=9e-148]} {Dmel: FBgn0010414, SerT, Serotonin transporter, [Score=420, Expect=8e-139]} {Celegans: WBGene00003387, mod-5, Transporter, [Score=371, Expect=1e-119]} {Smed: dd_Smed_v6_22486_0_1, dd_Smed_v6_22486_0_1, [Score=497, Expect=1e-168]} {RNA1509_9639} {RNA1310_4480.1, RNA1509_9639} {RNA1509_9639, RNA815_1493}
11. MligTC455_36610 382 7.95 Mlig455_038889, Mlig455_057428

Neo: -

Age: logFC(26M/2M)=-0.955

 PJA2 1.723 0.953 - - - 0.770 -

Mlig455_038889 {REF} {Length: 1874} {Pfam: Ring finger domain [PF13639.8, score=34.9]; RING-H2 zinc finger domain [PF12678.9, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.4]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]; zinc-RING finger domain [PF14634.8, score=18.8]; Rtf2 RING-finger [PF04641.14, score=18.0]} {Dmel: FBgn0034314, nopo, no poles, [Score=57.8, Expect=6e-10]} {RNA1509_17799} {RNA1310_27750.1} {RNA815_14952}

Mlig455_057428 {REF} {Length: 1314} {Pfam: Ring finger domain [PF13639.8, score=38.2]; RING-H2 zinc finger domain [PF12678.9, score=30.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.4]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=20.6]; zinc-RING finger domain [PF14634.8, score=20.6]; Rtf2 RING-finger [PF04641.14, score=19.4]} {Human: ENSG00000198961, PJA2, praja ring finger ubiquitin ligase 2, [Score=46.2, Expect=1e-05]} {Mouse: ENSMUSG00000024083, Pja2, praja ring finger ubiquitin ligase 2, [Score=46.2, Expect=1e-05]} {Dmel: FBgn0034314, nopo, no poles, [Score=59.3, Expect=2e-10]} {RNA1509_17799} {RNA1310_27750.1, RNA1509_17799} {RNA1509_17799, RNA815_14952}
12. MligTC455_17820 290 6.05 Mlig455_012856

Neo: -

Age: -

 1.715 0.951 0.764 - - - - Mlig455_012856 {REF} {Length: 1613} {Pfam: Methyl-accepting chemotaxis protein (MCP) signalling domain [PF00015.23, score=18.7]} {RNA1509_25600} {RNA1310_22873, RNA1509_25600} {RNA1509_25600, RNA815_10708}
13. MligTC455_48905 3322 69.2 Mlig455_054101

Neo: -

Age: logFC(26M/2M)=-0.438

 CCDC113 1.675 0.958 - - - 0.717 - Mlig455_054101 {REF} {Length: 1417} {Pfam: Domain of unknown function (DUF4201) [PF13870.8, score=145.0]} {Human: ENSG00000103021, CCDC113, coiled-coil domain containing 113, [RH, Score=204, Expect=2e-61]} {Mouse: ENSMUSG00000036598, Ccdc113, coiled-coil domain containing 113, [RH, Score=212, Expect=6e-65]} {Dmel: FBgn0031235, CG13693, [RH, Score=67.4, Expect=6e-12]} {Smed: dd_Smed_v6_11884_0_1, dd_Smed_v6_11884_0_1, [RH, Score=325, Expect=3e-109]} {RNA1509_22414, RNA1509_4108} {RNA1310_19439, RNA1509_22414, RNA1509_4108} {RNA1509_22414, RNA1509_4108, RNA815_8863}
14. MligTC455_16991 437 9.09 Mlig455_057989

Neo: -

Age: Up-Up-Down

Regeneration-downregulated BL: -7.705

Regeneration-depleted BL: -7.705

 1.672 0.964 - 0.708 - - - Mlig455_057989 {REF} {Length: 4840} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=124.1]; WSC domain [PF01822.21, score=40.4]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=64.3, Expect=3e-10]} {Smed: dd_Smed_v6_15195_0_1, dd_Smed_v6_15195_0_1, [Score=65.1, Expect=1e-10]} {RNA1509_20328} {RNA1310_3478} {RNA815_19382.2}
15. MligTC455_11137 65 1.36 Mlig455_007742

Neo: -

Age: -

 FAT1 0.983 0.983 - - - - - Mlig455_007742 {REF} {Length: 4301} {Pfam: Cadherin domain [PF00028.19, score=102.1]; EGF-like domain [PF00008.29, score=51.2]; Calcium-binding EGF domain [PF07645.17, score=33.3]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=207, Expect=2e-53]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=205, Expect=1e-52]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=212, Expect=5e-55]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=210, Expect=2e-54]} {Dmel: FBgn0261574, kug, kugelei, [Score=155, Expect=9e-38]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=121, Expect=2e-27]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=161, Expect=1e-39]} {RNA1509_55673} {RNA1310_45646} {RNA815_38697}
16. MligTC455_13329 95 1.98 Mlig455_009198

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.124

 0.982 0.982 - - - - - Mlig455_009198 {REF} {Length: 2007} {RNA1509_22077, RNA1509_32545} {RNA1310_29047.1, RNA1509_22077, RNA1509_32545} {RNA1509_22077, RNA1509_32545, RNA815_17550}
17. MligTC455_53955 385 8.01 Mlig455_016192

Neo: -

Age: -

Region-enriched R2: 2.185/0.00203

 TMEM216 0.98 0.980 - - - - - Mlig455_016192 {REF} {Length: 1165} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=85.0]} {Human: ENSG00000187049, TMEM216, transmembrane protein 216, [RH, Score=61.2, Expect=7e-12]} {Mouse: ENSMUSG00000024667, Tmem216, transmembrane protein 216, [RH, Score=63.9, Expect=3e-13]} {Dmel: FBgn0037615, CG11760, [RH, Score=63.2, Expect=6e-13]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [RH, Score=82.4, Expect=1e-20]} {RNA1509_39699, RNA1509_53860} {RNA1310_30237, RNA1509_39699, RNA1509_53860} {RNA1509_39699, RNA1509_53860, RNA815_653}
18. MligTC455_40486 234 4.87 Mlig455_043769

Neo: -

Age: logFC(26M/2M)=-0.327

 0.976 0.976 - - - - - Mlig455_043769 {REF} {Length: 6309} {Pfam: C2 domain in Dock180 and Zizimin proteins [PF14429.8, score=34.3]} {Mouse: ENSMUSG00000035954, Dock4, dedicator of cytokinesis 4, [Score=52.8, Expect=4e-06]} {RNA1509_19446} {RNA1310_1320, RNA1509_19446} {RNA1509_19446, RNA815_27032}
19. MligTC455_45876 77 1.59 Mlig455_017599, Mlig455_058883

Neo: -

Age: -

 0.975 0.975 - - - - -

Mlig455_017599 {REF} {Length: 3586} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=27.3]} {Celegans: WBGene00019444, frpr-11, FMRFamide Peptide Receptor family, [Score=63.5, Expect=4e-11]} {RNA1310_90357}

Mlig455_058883 {REF} {Length: 2226} {RNA1310_90357}
20. MligTC455_39348 410 8.54 Mlig455_054310

Neo: -

Age: -

 ERG 0.964 0.964 - - - - - Mlig455_054310 {REF} {Length: 2524} {Pfam: Ets-domain [PF00178.24, score=93.5]} {Human: ENSG00000157554, ERG, ERG, ETS transcription factor, [Score=92.4, Expect=4e-20]; ENSG00000117036, ETV3, ETS variant 3, [Score=92.0, Expect=8e-20]; ENSG00000151702, FLI1, Fli-1 proto-oncogene, ETS transcription factor, [Score=90.1, Expect=2e-19]; ENSG00000253831, ETV3L, ETS variant 3 like, [Score=90.1, Expect=1e-19]; ENSG00000135373, EHF, ETS homologous factor, [Score=87.8, Expect=5e-19]} {Mouse: ENSMUSG00000040732, Erg, ETS transcription factor, [Score=92.4, Expect=3e-20]; ENSMUSG00000003382, Etv3, ets variant 3, [Score=91.7, Expect=6e-20]; ENSMUSG00000016087, Fli1, Friend leukemia integration 1, [Score=90.1, Expect=2e-19]} {Dmel: FBgn0005660, Ets21C, Ets at 21C, [Score=87.8, Expect=2e-19]} {Celegans: WBGene00016600, ets-5, ETS class transcription factor, [Score=87.0, Expect=6e-20]} {Smed: dd_Smed_v6_11113_0_1, dd_Smed_v6_11113_0_1, [Score=86.7, Expect=7e-19]} {RNA1509_27900, RNA1509_55575} {RNA1310_26221, RNA1509_27900} {RNA1509_27900, RNA815_19654}
21. MligTC455_45825 525 10.94 Mlig455_062343

Neo: -

Age: -

 ZDHHC4 0.956 0.956 - - - - - Mlig455_062343 {REF} {Length: 1370} {TRANSSPLICED} {Pfam: DHHC palmitoyltransferase [PF01529.22, score=102.9]} {Human: ENSG00000136247, ZDHHC4, zinc finger DHHC-type containing 4, [RH, Score=136, Expect=3e-36]} {Mouse: ENSMUSG00000001844, Zdhhc4, zinc finger, DHHC domain containing 4, [RH, Score=151, Expect=4e-42]} {Dmel: FBgn0260941, app, approximated, [Score=71.6, Expect=2e-13]} {Celegans: WBGene00012718, dhhc-8, Palmitoyltransferase, [Score=71.6, Expect=2e-13]} {Smed: dd_Smed_v6_7355_0_1, dd_Smed_v6_7355_0_1, [RH, Score=209, Expect=1e-65]} {RNA1509_14912} {RNA1310_23324, RNA1509_14912} {RNA1509_14912, RNA815_11089.1}
22. MligTC455_41488 418 8.71 Mlig455_000083

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.872/0.00814

 SLC18A3 0.955 0.955 - - - - - Mlig455_000083 {REF} {Length: 1974} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.9]; MFS_1 like family [PF12832.9, score=26.9]} {Human: ENSG00000187714, SLC18A3, solute carrier family 18 member A3, [Score=103, Expect=5e-23]; ENSG00000036565, SLC18A1, solute carrier family 18 member A1, [Score=99.4, Expect=1e-21]} {Mouse: ENSMUSG00000100241, Slc18a3, solute carrier family 18 (vesicular monoamine), member 3, [Score=107, Expect=3e-24]} {Dmel: FBgn0270928, VAChT, Vesicular acetylcholine transporter, [Score=199, Expect=1e-56]} {Celegans: WBGene00006756, unc-17, Vesicular acetylcholine transporter unc-17, [Score=182, Expect=7e-51]} {Smed: dd_Smed_v6_11630_0_1, dd_Smed_v6_11630_0_1, [Score=187, Expect=7e-53]} {RNA1509_37669} {RNA1310_14899.1} {RNA815_15265}
23. MligTC455_28042 408 8.5 Mlig455_025125

Neo: -

Age: -

 LDB2 0.953 0.953 - - - - - Mlig455_025125 {REF} {Length: 3480} {TRANSSPLICED} {Pfam: LIM-domain binding protein [PF01803.18, score=99.3]; LIM interaction domain (LID) [PF17916.3, score=40.0]} {Human: ENSG00000169744, LDB2, LIM domain binding 2, [Score=218, Expect=2e-64]} {Mouse: ENSMUSG00000039706, Ldb2, LIM domain binding 2, [Score=212, Expect=2e-62]; ENSMUSG00000025223, Ldb1, LIM domain binding 1, [Score=208, Expect=5e-61]} {Dmel: FBgn0013764, Chi, Chip, [Score=190, Expect=1e-52]} {Celegans: WBGene00002261, ldb-1, F58A3.1a; LIM Domain Binding protein, [Score=81.3, Expect=7e-16]} {Smed: dd_Smed_v6_3678_0_1, dd_Smed_v6_3678_0_1, [Score=201, Expect=2e-56]} {RNA1509_58910} {RNA1310_20938} {RNA815_15319}

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