Data search


search
Exact
Search

Results for MligTC455_19657

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_19657 21982 457.97 Mlig455_019971, Mlig455_026405, Mlig455_038088

Neo: -

Age: -

SOD2

Mlig455_019971 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.4]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=1e-101]} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1310_30405, RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586, RNA815_13584}

Mlig455_026405 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=291, Expect=8e-100]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=5e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=3e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=295, Expect=7e-102]} {RNA1509_9586} {RNA1310_30405} {RNA815_13584}

Mlig455_038088 {REF} {Length: 1157} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=252, Expect=4e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=2e-101]} {RNA1509_1430} {RNA1310_30405} {RNA815_13584}

Cumulative graph for MligTC455_19657

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.638 8.924 0.00001 0.00756
RegionR2 0.154 8.924 0.51562 0.89178
RegionR3 0.406 8.924 0.04099 0.35322
RegionR4 0.731 8.924 0.00145 0.01390
RegionR5 0.918 8.924 0.00000 0.00004
RegionR6 0.254 8.924 0.20924 0.78623
RegionR7 -0.191 8.924 0.36701 1.00000
RegionR8 -0.634 8.924 0.00956 0.18431

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.236 8.924 0.63579 1.00000
RegenerationR2 0.029 8.924 0.90929 1.00000
RegenerationR3 0.316 8.924 0.22633 0.66150
RegenerationR4 0.101 8.924 0.70581 0.95542
RegenerationR5 -0.033 8.924 0.89690 1.00000
RegenerationR6 0.16 8.924 0.53314 0.82879
RegenerationBL 0.279 8.924 0.21081 0.55426
RegenerationTP 0.683 8.924 0.00458 0.11255


Genes with expression patterns similar to MligTC455_19657

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_19657 21982 457.97 Mlig455_019971, Mlig455_026405, Mlig455_038088

Neo: -

Age: -

SOD2 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_019971 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.4]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=1e-101]} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1310_30405, RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586, RNA815_13584}

Mlig455_026405 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=291, Expect=8e-100]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=5e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=3e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=295, Expect=7e-102]} {RNA1509_9586} {RNA1310_30405} {RNA815_13584}

Mlig455_038088 {REF} {Length: 1157} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=252, Expect=4e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=2e-101]} {RNA1509_1430} {RNA1310_30405} {RNA815_13584}
2. MligTC455_36669 9053 188.61 Mlig455_022880

Neo: -

Age: -

Region-enriched R4: 1.197/0.00001

0.961 - - - - - 0.961 Mlig455_022880 {REF} {Length: 798} {TRANSSPLICED} {Pfam: Deltamethrin resistance [PF16020.7, score=24.4]} {RNA1509_18501, RNA1509_1994, RNA1509_50278} {RNA1310_44846.1, RNA1509_18501, RNA1509_1994, RNA1509_50278} {RNA1509_18501, RNA1509_1994, RNA1509_50278, RNA815_21459}
3. MligTC455_50540 5116 106.59 Mlig455_068057

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.343

0.956 - - - - - 0.956 Mlig455_068057 {REF} {Length: 521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=35.5]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=42.7, Expect=7e-06]} {RNA1509_23900, RNA1509_3995} {RNA1310_64510.1, RNA1509_23900, RNA1509_3995} {RNA1509_23900, RNA1509_3995, RNA815_30472}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA