TomoSeq data search

Data search

Results for MligTC455_50540

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_50540

5116

106.59

Mlig455_068057

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.343

Mlig455_068057 {REF} {Length: 521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=35.5]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=42.7, Expect=7e-06]} {RNA1509_23900, RNA1509_3995} {RNA1310_64510.1, RNA1509_23900, RNA1509_3995} {RNA1509_23900, RNA1509_3995, RNA815_30472}

Cumulative graph for MligTC455_50540

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.24	6.929	0.02256	0.40709
RegionR2	-0.447	6.929	0.24834	0.62585
RegionR3	0.429	6.929	0.17887	0.70824
RegionR4	0.367	6.929	0.30216	0.61528
RegionR5	0.5	6.929	0.10318	0.31150
RegionR6	0.247	6.929	0.44051	1.00000
RegionR7	0.117	6.929	0.71552	1.00000
RegionR8	0.027	6.929	0.94156	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.624	6.929	0.05971	0.72608
RegenerationR2	-0.586	6.929	0.14961	0.58297
RegenerationR3	-0.758	6.929	0.06834	0.43906
RegenerationR4	-0.561	6.929	0.18855	0.63220
RegenerationR5	-0.531	6.929	0.19700	0.62923
RegenerationR6	-0.952	6.929	0.02445	0.19490
RegenerationBL	-1.104	6.929	0.00511	0.06668
RegenerationTP	-0.409	6.929	0.31077	0.75547

Genes with expression patterns similar to MligTC455_50540

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50540	5116	106.59	Mlig455_068057	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.343		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068057 {REF} {Length: 521} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5564) [PF17719.3, score=35.5]} {Mouse: ENSMUSG00000071653, 1810009A15Rik, RIKEN cDNA 1810009A15 gene, [Score=42.7, Expect=7e-06]} {RNA1509_23900, RNA1509_3995} {RNA1310_64510.1, RNA1509_23900, RNA1509_3995} {RNA1509_23900, RNA1509_3995, RNA815_30472}
2.	MligTC455_53560	7500	156.25	Mlig455_006919, Mlig455_017935	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.200/0.00022	TIMM8A	2.502	0.765	-	-	0.956	-	0.781	Mlig455_006919 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=64.9]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [RH, Score=52.4, Expect=2e-09]} {Mouse: ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [RH, Score=52.4, Expect=1e-09]; ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [RH, Score=52.0, Expect=2e-09]} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1310_36867, RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677, RNA815_30004} Mlig455_017935 {REF} {Length: 497} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=58.7]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [Score=48.5, Expect=4e-08]} {Mouse: ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [Score=48.5, Expect=3e-08]; ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [Score=48.5, Expect=3e-08]} {RNA1509_57054} {RNA1310_61445} {RNA815_30004}
3.	MligTC455_50703	6430	133.96	Mlig455_053984	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.160	RHOA	1.724	0.752	-	-	0.972	-	-	Mlig455_053984 {REF} {Length: 1835} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=192.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=79.7]; ADP-ribosylation factor family [PF00025.23, score=37.2]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.3]} {Human: ENSG00000067560, RHOA, ras homolog family member A, [RH, Score=346, Expect=6e-123]; ENSG00000155366, RHOC, ras homolog family member C, [RH, Score=346, Expect=5e-123]; ENSG00000143878, RHOB, ras homolog family member B, [RH, Score=329, Expect=3e-116]} {Mouse: ENSMUSG00000007815, Rhoa, ras homolog family member A, [RH, Score=346, Expect=4e-123]; ENSMUSG00000002233, Rhoc, ras homolog family member C, [RH, Score=346, Expect=4e-123]; ENSMUSG00000054364, Rhob, ras homolog family member B, [RH, Score=329, Expect=2e-116]} {Dmel: FBgn0014020, Rho1, [RH, Score=338, Expect=4e-120]} {Celegans: WBGene00004357, rho-1, Ras-like GTP-binding protein rhoA, [RH, Score=331, Expect=2e-117]} {Smed: dd_Smed_v6_578_0_1, dd_Smed_v6_578_0_1, [RH, Score=318, Expect=2e-112]} {RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654} {RNA1310_12715, RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654} {RNA1509_16662, RNA1509_24432, RNA1509_25397, RNA1509_31841, RNA1509_51478, RNA1509_654, RNA815_4833.1}
4.	MligTC455_45747	2366	49.3	Mlig455_017780	Neo: - Age: - Region-enriched R4: 1.872/0.00000	NDUFA5	1.667	-	-	-	0.953	-	0.714	Mlig455_017780 {REF} {Length: 663} {TRANSSPLICED} {Pfam: ETC complex I subunit conserved region [PF04716.16, score=91.0]} {Human: ENSG00000128609, NDUFA5, NADH:ubiquinone oxidoreductase subunit A5, [RH, Score=123, Expect=3e-37]} {Mouse: ENSMUSG00000023089, Ndufa5, NADH:ubiquinone oxidoreductase subunit A5, [RH, Score=131, Expect=1e-40]} {Dmel: FBgn0047038, ND-13B, NADH dehydrogenase (ubiquinone) 13 kDa B subunit, [RH, Score=131, Expect=2e-40]} {Celegans: WBGene00007880, C33A12.1, Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, [RH, Score=130, Expect=6e-40]} {Smed: dd_Smed_v6_1878_0_1, dd_Smed_v6_1878_0_1, [RH, Score=151, Expect=6e-49]} {RNA1509_10094, RNA1509_40064} {RNA1310_52774.2, RNA1509_10094, RNA1509_40064} {RNA1509_10094, RNA1509_40064, RNA815_24146.1}
5.	MligTC455_27228	11798	245.79	Mlig455_012915	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_012915 {REF} {Length: 1695} {TRANSSPLICED} {Pfam: Profilin [PF00235.21, score=79.4]} {Dmel: FBgn0000308, chic, chickadee, [RH, Score=69.7, Expect=9e-16]} {Celegans: WBGene00003991, pfn-3, Profilin-3, [RH, Score=52.0, Expect=3e-09]} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1310_18604.2, RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132} {RNA1509_13759, RNA1509_20457, RNA1509_47013, RNA1509_5132, RNA815_6779}
6.	MligTC455_29579	4212	87.76	Mlig455_063430, Mlig455_066644	Neo: Int S/G2/M Age: logFC(26M/2M)=0.153	SGTA	0.961	-	-	-	-	-	0.961	Mlig455_063430 {REF} {Length: 2785} {Pfam: Tetratricopeptide repeat [PF00515.30, score=71.2]; Tetratricopeptide repeat [PF07719.19, score=53.2]; Tetratricopeptide repeat [PF13181.8, score=46.4]; Tetratricopeptide repeat [PF13428.8, score=39.5]; Tetratricopeptide repeat [PF13431.8, score=36.8]; Tetratricopeptide repeat [PF13176.8, score=34.9]; TPR repeat [PF13414.8, score=34.9]; Homodimerisation domain of SGTA [PF16546.7, score=33.4]; Tetratricopeptide repeat [PF14559.8, score=31.3]; Tetratricopeptide repeat [PF13424.8, score=30.5]; Tetratricopeptide repeat [PF13432.8, score=25.9]; Tetratricopeptide repeat [PF13371.8, score=24.3]; Tetratricopeptide repeat [PF13374.8, score=23.6]; Tetratricopeptide repeat [PF13429.8, score=22.4]} {Human: ENSG00000104969, SGTA, small glutamine rich tetratricopeptide repeat containing alpha, [RH, Score=203, Expect=2e-62]} {Mouse: ENSMUSG00000004937, Sgta, small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, [RH, Score=199, Expect=5e-61]} {Dmel: FBgn0032640, Sgt, small glutamine-rich tetratricopeptide containing protein, [RH, Score=129, Expect=4e-34]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [RH, Score=154, Expect=9e-44]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [RH, Score=152, Expect=5e-43]} {RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447} {RNA1310_10307.1, RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447} {RNA1509_14064, RNA1509_18904, RNA1509_25239, RNA1509_27623, RNA1509_32386, RNA1509_4447, RNA815_7123} Mlig455_066644 {REF} {Length: 2551} {Pfam: Tetratricopeptide repeat [PF00515.30, score=71.2]; Tetratricopeptide repeat [PF07719.19, score=53.2]; Tetratricopeptide repeat [PF13181.8, score=46.4]; Tetratricopeptide repeat [PF13428.8, score=39.6]; Tetratricopeptide repeat [PF13431.8, score=36.8]; Tetratricopeptide repeat [PF13176.8, score=34.9]; TPR repeat [PF13414.8, score=34.9]; Homodimerisation domain of SGTA [PF16546.7, score=32.8]; Tetratricopeptide repeat [PF14559.8, score=31.5]; Tetratricopeptide repeat [PF13424.8, score=30.7]; Tetratricopeptide repeat [PF13371.8, score=25.2]; Tetratricopeptide repeat [PF13432.8, score=24.6]; Tetratricopeptide repeat [PF13374.8, score=23.6]; Tetratricopeptide repeat [PF13429.8, score=22.4]} {Human: ENSG00000104969, SGTA, small glutamine rich tetratricopeptide repeat containing alpha, [RH, Score=202, Expect=4e-62]} {Mouse: ENSMUSG00000004937, Sgta, small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha, [RH, Score=199, Expect=8e-61]} {Dmel: FBgn0032640, Sgt, small glutamine-rich tetratricopeptide containing protein, [RH, Score=127, Expect=2e-33]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [RH, Score=153, Expect=2e-43]} {Smed: dd_Smed_v6_1462_0_1, dd_Smed_v6_1462_0_1, [RH, Score=155, Expect=4e-44]} {RNA1509_18904} {RNA1310_10307.1} {RNA815_7123}
7.	MligTC455_19657	21982	457.97	Mlig455_019971, Mlig455_026405, Mlig455_038088	Neo: - Age: -	SOD2	0.956	-	-	-	-	-	0.956	Mlig455_019971 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.4]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=1e-101]} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1310_30405, RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586} {RNA1509_11111, RNA1509_1430, RNA1509_7581, RNA1509_9586, RNA815_13584} Mlig455_026405 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=291, Expect=8e-100]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=5e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=253, Expect=3e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=3e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=295, Expect=7e-102]} {RNA1509_9586} {RNA1310_30405} {RNA815_13584} Mlig455_038088 {REF} {Length: 1157} {TRANSSPLICED} {Pfam: Iron/manganese superoxide dismutases, C-terminal domain [PF02777.20, score=129.0]; Iron/manganese superoxide dismutases, alpha-hairpin domain [PF00081.24, score=109.4]} {Human: ENSG00000112096, SOD2, superoxide dismutase 2, [RH, Score=290, Expect=1e-99]} {Mouse: ENSMUSG00000006818, Sod2, superoxide dismutase 2, mitochondrial, [RH, Score=298, Expect=7e-103]} {Dmel: FBgn0010213, Sod2, Superoxide dismutase 2 (Mn), [RH, Score=252, Expect=4e-85]} {Celegans: WBGene00004931, sod-2, Superoxide dismutase [Mn] 1, mitochondrial, [RH, Score=283, Expect=4e-97]} {Smed: dd_Smed_v6_1259_0_1, dd_Smed_v6_1259_0_1, [RH, Score=294, Expect=2e-101]} {RNA1509_1430} {RNA1310_30405} {RNA815_13584}
8.	MligTC455_19231	149	3.11	Mlig455_064092	Neo: - Age: - Region-enriched R7: 4.202/0.00037 Region-enriched R6: 3.700/0.00828		0.954	-	-	-	-	0.954	-	Mlig455_064092 {REF} {Length: 1757} {RNA1509_35166} {RNA1310_79280} {RNA815_45488}

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