Data search
Results for MligTC455_19688
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_19688 | 948 | 19.76 | Mlig455_035947, Mlig455_058414 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.370/0.01905 |
Mlig455_035947 {REF} {Length: 1680} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=20.8]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_40951} {RNA1310_13851.1} {RNA815_7640} Mlig455_058414 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=21.0]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_38072, RNA1509_40951} {RNA1310_13851.1, RNA1509_38072, RNA1509_40951} {RNA1509_38072, RNA1509_40951, RNA815_7640} |
Cumulative graph for MligTC455_19688
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.591 | 4.614 | 0.59482 | 1.00000 | |
| RegionR2 | 0.032 | 4.614 | 0.94837 | 1.00000 | |
| RegionR3 | -0.408 | 4.614 | 0.32053 | 0.85857 | |
| RegionR4 | 1.37 | 4.614 | 0.00217 | 0.01905 | |
| RegionR5 | 0.222 | 4.614 | 0.53996 | 0.90304 | |
| RegionR6 | -0.345 | 4.614 | 0.40469 | 0.97473 | |
| RegionR7 | -0.324 | 4.614 | 0.52498 | 1.00000 | |
| RegionR8 | 0.044 | 4.614 | 0.94294 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.623 | 4.614 | 0.69057 | 1.00000 | |
| RegenerationR2 | 0.045 | 4.614 | 0.91216 | 1.00000 | |
| RegenerationR3 | -0.398 | 4.614 | 0.39145 | 0.79688 | |
| RegenerationR4 | -0.719 | 4.614 | 0.11838 | 0.52409 | |
| RegenerationR5 | 0.029 | 4.614 | 0.94496 | 1.00000 | |
| RegenerationR6 | -0.471 | 4.614 | 0.32182 | 0.66823 | |
| RegenerationBL | 0.406 | 4.614 | 0.39500 | 0.76358 | |
| RegenerationTP | -0.925 | 4.614 | 0.12335 | 0.53292 |
Genes with expression patterns similar to MligTC455_19688
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_19688 | 948 | 19.76 | Mlig455_035947, Mlig455_058414 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.370/0.01905 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035947 {REF} {Length: 1680} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=20.8]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_40951} {RNA1310_13851.1} {RNA815_7640} Mlig455_058414 {REF} {Length: 2312} {TRANSSPLICED} {Pfam: Phosphoribosyl transferase domain [PF00156.29, score=38.9]; N-terminal domain of ribose phosphate pyrophosphokinase [PF13793.8, score=35.1]; Phosphoribosyl synthetase-associated domain [PF14572.8, score=21.0]} {Smed: dd_Smed_v6_12495_0_1, dd_Smed_v6_12495_0_1, [RH, Score=294, Expect=1e-98]} {RNA1509_38072, RNA1509_40951} {RNA1310_13851.1, RNA1509_38072, RNA1509_40951} {RNA1509_38072, RNA1509_40951, RNA815_7640} |
|
| 2. | MligTC455_34972 | 360 | 7.5 | Mlig455_065974 | Neo: - Age: logFC(26M/2M)=0.504 Region-enriched R5: 1.257/0.01592 |
1.678 | - | - | - | 0.722 | - | 0.956 | Mlig455_065974 {REF} {Length: 1665} {TRANSSPLICED} {RNA1509_27158} {RNA1310_15720.1} {RNA815_7713} | |
| 3. | MligTC455_21785 | 107 | 2.24 | Mlig455_005064 | Neo: - |
KRIT1 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_005064 {REF} {Length: 4037} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.0]; Ankyrin repeats (many copies) [PF13857.8, score=50.3]; Ankyrin repeats (many copies) [PF13637.8, score=40.3]; Ankyrin repeat [PF00023.32, score=35.8]; Ankyrin repeat [PF13606.8, score=32.7]; FERM central domain [PF00373.20, score=26.3]} {Human: ENSG00000001631, KRIT1, KRIT1, ankyrin repeat containing, [RH, Score=218, Expect=2e-60]; ENSG00000285953, AC000120.3, novel protein, [RH, Score=209, Expect=2e-57]} {Mouse: ENSMUSG00000000600, Krit1, KRIT1, ankyrin repeat containing, [RH, Score=207, Expect=1e-56]} {Dmel: FBgn0029137, Patsas, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00013955, kri-1, KRIT 1 (Krev interaction trapped/cerebral cavernous malformation 1) homolog; Krev interaction trapped/cerebral cavernous malformation 1 isoform a, [RH, Score=85.9, Expect=5e-17]} {Smed: dd_Smed_v6_10935_0_1, dd_Smed_v6_10935_0_1, [RH, Score=137, Expect=3e-33]} {RNA1509_17918} {RNA1310_6799, RNA1509_17918} {RNA1509_17918, RNA815_1724} |
| 4. | MligTC455_38788 | 908 | 18.91 | Mlig455_018427 | Neo: - Age: - |
TMEM229B | 0.954 | - | - | - | - | - | 0.954 | Mlig455_018427 {REF} {Length: 1096} {TRANSSPLICED} {Pfam: Putative ABC-transporter type IV [PF06541.13, score=30.7]} {Human: ENSG00000198133, TMEM229B, transmembrane protein 229B, [RH, Score=100, Expect=3e-27]} {Mouse: ENSMUSG00000046157, Tmem229b, transmembrane protein 229B, [RH, Score=101, Expect=1e-27]} {Smed: dd_Smed_v6_9704_0_1, dd_Smed_v6_9704_0_1, [RH, Score=156, Expect=1e-49]} {RNA1509_16512, RNA1509_34938} {RNA1310_31531, RNA1509_16512, RNA1509_34938} {RNA1509_16512, RNA1509_34938, RNA815_14373} |
| 5. | MligTC455_13489 | 99 | 2.06 | Mlig455_052411 | Neo: Irradiation Age: - Region-enriched R5: 2.712/0.02804 |
0.952 | - | - | - | 0.952 | - | - | Mlig455_052411 {REF} {Length: 1290} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=30.9]} {RNA1509_40924} {RNA1310_26717} {RNA815_11954.1} |
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